FFCP PHASE1:Hg19::chr19:43383856..43383876,-: Difference between revisions
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|id=chr19:43383856..43383876,-
|short_description=p1@PSG1
|description=CAGE_peak_1_at_PSG1_5end
|association_with_transcript=0bp_to_ENST00000244296,NM_001184825,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5669 | |EntrezGene=5669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9514 | |HGNC=9514 | ||
|TSSclassifier=strong | |||
|UniProt=P11464,Q96QL5,Q9UPK9,Q8NBY8 | |UniProt=P11464,Q96QL5,Q9UPK9,Q8NBY8 | ||
|association_with_transcript=0bp_to_ENST00000244296,NM_001184825,NM_001184826,NM_006905,uc002oug.1,uc002oun.2,uc002our.1,uc002ouy.1,uc002ouz.1,uc002ova.1,uc002ovb.2,uc002ovc.2,uc002ovd.1,uc010eio.1_5end | |||
|cluster_id=chr19:43383856..43383876,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG1_5end | |||
|id=chr19:43383856..43383876,- | |||
|ontology_enrichment_celltype=CL:0002620!2.11e-14!23;CL:0000057!9.85e-14!75;CL:0000055!5.62e-08!180;CL:0002552!4.58e-07!5;CL:0000077!9.80e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.34e-21;23!CL:0000197;6.06e-11;6!CL:0000098;6.06e-11;6!CL:0002167;6.06e-11;6!CL:0002537;1.14e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.15e-21,23;CL:0000197,5.84e-11,6;CL:0000098,5.84e-11,6;CL:0002167,5.84e-11,6;CL:0000057,4.70e-09,76;CL:0002537,1.12e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.69e-09!5;DOID:450!5.69e-09!5;DOID:66!5.69e-09!5;DOID:423!5.69e-09!5;DOID:0080000!5.69e-09!5;DOID:11722!5.69e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.60e-19;5!DOID:450;4.60e-19;5!DOID:66;4.60e-19;5!DOID:423;4.60e-19;5!DOID:0080000;4.60e-19;5!DOID:11722;4.60e-19;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.60e-19,5;DOID:450,3.60e-19,5;DOID:66,3.60e-19,5;DOID:423,3.60e-19,5;DOID:0080000,3.60e-19,5;DOID:11722,3.60e-19,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.81e-11!40;UBERON:0003102!2.36e-10!95;UBERON:0002199!6.49e-09!45;UBERON:0002416!6.49e-09!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.60e-09;41!UBERON:0002199;6.59e-08;46!UBERON:0002416;6.59e-08;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.20e-12,41;UBERON:0002199,5.74e-11,46;UBERON:0002416,5.74e-11,46;UBERON:0005631,5.22e-07,14;UBERON:0000158,5.22e-07,14 | |||
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| ||
|short_description=p1@PSG1 | |||
}} | }} |
Latest revision as of 10:10, 18 September 2015
Short description: | p1@PSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000244296, NM_001184825, NM_001184826, NM_006905, uc002oug.1, uc002oun.2, uc002our.1, uc002ouy.1, uc002ouz.1, uc002ova.1, uc002ovb.2, uc002ovc.2, uc002ovd.1, uc010eio.1_5end |
EntrezGene: | PSG1 |
HGNC: | 9514 |
UniProt: | P11464Q96QL5Q9UPK9Q8NBY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.15e-21 | 23 |
receptor cell | 5.84e-11 | 6 |
sensory epithelial cell | 5.84e-11 | 6 |
olfactory epithelial cell | 5.84e-11 | 6 |
fibroblast | 4.70e-09 | 76 |
amnion mesenchymal stem cell | 1.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.20e-12 | 41 |
integument | 5.74e-11 | 46 |
integumental system | 5.74e-11 | 46 |
extraembryonic membrane | 5.22e-07 | 14 |
membranous layer | 5.22e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.60e-19 | 5 |
myotonic disease | 3.60e-19 | 5 |
muscle tissue disease | 3.60e-19 | 5 |
myopathy | 3.60e-19 | 5 |
muscular disease | 3.60e-19 | 5 |
myotonic dystrophy | 3.60e-19 | 5 |