FFCP PHASE1:Hg19::chr7:134528663..134528702,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt=C9JEK3 | |UniProt=C9JEK3 | ||
|association_with_transcript=30bp_to_ENST00000445569,ENST00000489019_5end | |association_with_transcript=30bp_to_ENST00000445569,ENST00000489019_5end | ||
|cluster_id=chr7:134528663..134528702,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_22_at_CALD1_5end | |description=CAGE_peak_22_at_CALD1_5end | ||
|id=chr7:134528663..134528702,+ | |id=chr7:134528663..134528702,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!3.16e-16!75;CL:0002620!1.68e-08!23;CL:0000393!6.04e-08!60;CL:0000211!6.04e-08!60;CL:0002334!5.23e-07!12;CL:0002321!8.88e-07!248 | |ontology_enrichment_celltype=CL:0000055!8.46e-23!180;CL:0000057!3.16e-16!75;CL:0002620!1.68e-08!23;CL:0000393!6.04e-08!60;CL:0000211!6.04e-08!60;CL:0002334!5.23e-07!12;CL:0002321!8.88e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-09;23!CL:0002334;6.63e-09;12!CL:0000134;7.45e-08;55!CL:0000048;3.64e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.95e-16,76;CL:0002620,1.20e-09,23;CL:0002334,8.06e-09,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.73e-09!83;UBERON:0002329!6.73e-09!83;UBERON:0003077!6.73e-09!83;UBERON:0003059!6.73e-09!83;UBERON:0007282!6.73e-09!83;UBERON:0009618!6.73e-09!83;UBERON:0007285!6.73e-09!83;UBERON:0004872!4.34e-08!84;UBERON:0000468!5.47e-08!659;UBERON:0002385!3.02e-07!63;UBERON:0001015!3.02e-07!63;UBERON:0000383!3.02e-07!63;UBERON:0004290!3.94e-07!70;UBERON:0005256!4.20e-07!143;UBERON:0002199!7.29e-07!45;UBERON:0002416!7.29e-07!45;UBERON:0002097!8.43e-07!40;UBERON:0000486!8.59e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!6.73e-09!83;UBERON:0002329!6.73e-09!83;UBERON:0003077!6.73e-09!83;UBERON:0003059!6.73e-09!83;UBERON:0007282!6.73e-09!83;UBERON:0009618!6.73e-09!83;UBERON:0007285!6.73e-09!83;UBERON:0004872!4.34e-08!84;UBERON:0000468!5.47e-08!659;UBERON:0002385!3.02e-07!63;UBERON:0001015!3.02e-07!63;UBERON:0000383!3.02e-07!63;UBERON:0004290!3.94e-07!70;UBERON:0005256!4.20e-07!143;UBERON:0002199!7.29e-07!45;UBERON:0002416!7.29e-07!45;UBERON:0002097!8.43e-07!40;UBERON:0000486!8.59e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.65e-08;6!UBERON:0002358;1.65e-08;6!UBERON:0003684;1.65e-08;6!UBERON:0001178;1.65e-08;6!UBERON:0004457;2.68e-08;9!UBERON:0000042;2.68e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.80e-08,6;UBERON:0002358,1.80e-08,6;UBERON:0003684,1.80e-08,6;UBERON:0001178,1.80e-08,6;UBERON:0003102,1.50e-07,99;UBERON:0002199,4.79e-07,46;UBERON:0002416,4.79e-07,46;UBERON:0002097,6.62e-07,41 | |||
|phase1_expression=3.81524596468169,7.70761886007539,3.52386010239928,10.007329835313,7.59833860526389,11.3404008133048,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0.331397375727916,13.4465029290355,9.04041792035965,4.38186054232424,9.27072317701963,0.246242116153576,0.204000691244253,0,2.0036519099174,1.09499540058307,1.50651167513763,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,1.2786256184353,0.361439152384566,1.00267582127178,1.88300474649071,0,0,0.661743720148475,1.77383517970051,1.31752178539689,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0.838998872419812,2.20094433552054,0.626984899610432,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0,19.3819061161174,3.03913227994991,2.91300197789081,2.86836620748814,0.709336764396714,2.80338800071154,2.1349799145941,1.72667283892012,0.933633106199299,0.538842688278752,0.490385709340376,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0,0.280901613404497,0.204154171254893,0.491337269247072,0,1.18800285728205,6.67620709052104,0.910161361938026,0,0.168336113954066,0.125118519871964,0,1.75591048352335,4.29082914118628,2.40380894250555,0.226864366320042,7.71375433462106,6.62027905337559,3.60284231971255,1.20036438433761,1.54578793857658,10.0479810617795,4.65292140828975,1.85653965465393,2.24105111870757,4.29137416214995,2.20919756741518,1.13152239773168,7.4552014428489,4.13083602733325,2.7129694769678,0.966304265816484,0.818238361772504,0.573609190778008,0.731842236777572,0.132529768321485,0,0.10366105501537,0.504641701751257,0.72995471815166,3.12899064659632,20.5837100221723,0,7.42988684851167,0.721879481669586,0.828147600278907,0.674338760312407,0,0.220587945464788,0.435758888184812,0.237270619111097,0,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.514703430895577,0.548751427043128,0,0.502644862058154,0.277765335475589,0,0,2.88662684050547,0.231860809950154,0.939269553886573,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,4.87148171776693,1.98485136139341,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0.112131084345361,0,0.2933531432838,2.06834745212444,0,0.845302752556,11.1694008965646,12.4808924293639,0.257207374262142,0,0,1.85871391755592,0.542621605391443,0,0.325736184293735,1.06617584622764,0,1.80863626235752,2.61460037580088,3.79897366491817,0,0,0,3.35474797688216,3.44585807502342,1.42636905040718,0.579125226670317,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,1.91381625495949,0,0,0,0.36807447515742,0,0.271265023699736,22.0449113222656,22.4820525884424,16.5587535785631,12.0655657442495,0.300946099727719,0,0,2.65690239414175,0.737476674166813,0.695068915744663,0,0,0,0,0,0,0,0.30239029332968,3.2254015016441,6.44540287809862,10.9457436828899,4.10045277618243,8.18731598506726,10.2946509531909,2.96836132889982,1.69630663182921,0.710246901252508,0.164254312027618,1.03850885836724,2.20799719073923,0,1.20303882181971,0.276242966807689,1.37777337797528,2.00300284807389,2.36023946926963,0.451199612907412,0.231046011313244,0,0,0.422206515571503,0,0.170093705276516,0.863663664408557,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.515205058238611,0.824125183365091,0.165018999841176,0,0.650060246036521,1.6068392984416,0.290012154876366,0.154048617114644,0.15350367472613,0.689182862422653,0.859361958946189,0.435050081742686,0.511359764496605,0.801288320820636,0.826424576804891,0.768760269460425,0.638063562472921,0.50578890427775,2.78907329578371,2.83331112147576,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0.744316738719335,1.58189712359363,1.90630193923825,0,1.28381696410176,0,0.78494864019923,1.79872457583315,1.64722217841633,0.706874414074119,0.202182481573316,0,0.842516912477962,0,1.21856744815642,1.05650146756755,1.9109987597118,2.12108147930569,0,0,2.65375590096488,1.75380354101505,0,0.655894752046633,1.21746226177622,0.6196469961995,0.563391205064483,1.14729081763241,0.785992328104969,0.35667105148125,0,1.05553817648832,1.64647446479951,0,0,0,0,0,0.659006605437454,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.71623345421307,0,0.307160702099232,0.994147647766298,0,0.333926115068718,0,0,7.96991953004279,0.828851746593443,0,1.22722419002586,0,16.174058558414,0,0,0,7.89147245095469,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,2.77020930613669,0.91153644677601,0,0.269272933229316,0.217294743844016,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| ||
|short_description=p22@CALD1 | |short_description=p22@CALD1 | ||
}} | }} |
Latest revision as of 11:45, 16 September 2015
Short description: | p22@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | 30bp_to_ENST00000445569, ENST00000489019_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9JEK3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.95e-16 | 76 |
skin fibroblast | 1.20e-09 | 23 |
preadipocyte | 8.06e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.80e-08 | 6 |
peritoneum | 1.80e-08 | 6 |
abdominal cavity | 1.80e-08 | 6 |
visceral peritoneum | 1.80e-08 | 6 |
surface structure | 1.50e-07 | 99 |
integument | 4.79e-07 | 46 |
integumental system | 4.79e-07 | 46 |
skin of body | 6.62e-07 | 41 |