FFCP PHASE1:Hg19::chr19:47138144..47138165,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:47138144..47138165,-
|short_description=p2@GNG8
|description=CAGE_peak_2_at_GNG8_5end
|association_with_transcript=-205bp_to_ENST00000300873,NM_033258,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94235 | |EntrezGene=94235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19664 | |HGNC=19664 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UK08 | |UniProt=Q9UK08 | ||
|association_with_transcript=-205bp_to_ENST00000300873,NM_033258,uc010xyd.1_5end | |||
|cluster_id=chr19:47138144..47138165,- | |||
|description=CAGE_peak_2_at_GNG8_5end | |||
|id=chr19:47138144..47138165,- | |||
|ontology_enrichment_celltype=CL:0000242!2.29e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.55e-45;2!CL:0000242;2.55e-45;2!CL:0000312;7.92e-19;5!CL:0000240;7.23e-16;6!CL:0000311;7.23e-16;6!CL:0000079;7.23e-16;6!CL:0000237;7.23e-16;6!CL:0000095;3.80e-11;17!CL:0000362;6.54e-11;9!CL:0002319;5.00e-08;25!CL:0002159;2.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.55e-45,2;CL:0000312,7.92e-19,5;CL:0000240,7.23e-16,6;CL:0000311,7.23e-16,6;CL:0000079,7.23e-16,6;CL:0000237,7.23e-16,6;CL:0000036,7.23e-16,6;CL:0000357,7.23e-16,6;CL:0000114,7.23e-16,6;CL:0000095,3.80e-11,17;CL:0000123,3.80e-11,17;CL:0000362,6.54e-11,9;CL:0002319,5.00e-08,25;CL:0002159,2.44e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.23e-16;6!CL:0000114;7.23e-16;6!UBERON:0006238;5.64e-09;10!UBERON:0003056;1.51e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.20e-26!86;UBERON:0000955!3.76e-26!69;UBERON:0006238!3.76e-26!69;UBERON:0001017!1.10e-25!82;UBERON:0000073!1.57e-25!94;UBERON:0001016!1.57e-25!94;UBERON:0001049!2.20e-24!57;UBERON:0005068!2.20e-24!57;UBERON:0006241!2.20e-24!57;UBERON:0007135!2.20e-24!57;UBERON:0002616!2.07e-23!59;UBERON:0002780!3.31e-22!41;UBERON:0001890!3.31e-22!41;UBERON:0006240!3.31e-22!41;UBERON:0003080!1.33e-21!42;UBERON:0002020!1.01e-20!34;UBERON:0003528!1.01e-20!34;UBERON:0001893!1.46e-20!34;UBERON:0001869!6.86e-19!32;UBERON:0002791!2.42e-18!33;UBERON:0003075!3.23e-18!86;UBERON:0007284!3.23e-18!86;UBERON:0003056!6.63e-18!61;UBERON:0002346!3.48e-17!90;UBERON:0000153!1.46e-15!129;UBERON:0007811!1.46e-15!129;UBERON:0000033!3.51e-15!123;UBERON:0004121!4.35e-14!169;UBERON:0002619!1.20e-13!22;UBERON:0000924!1.29e-13!173;UBERON:0006601!1.29e-13!173;UBERON:0001871!3.63e-13!7;UBERON:0000956!6.99e-12!25;UBERON:0000203!6.99e-12!25;UBERON:0001950!6.99e-12!20;UBERON:0002420!1.63e-11!9;UBERON:0007245!1.63e-11!9;UBERON:0010009!1.63e-11!9;UBERON:0010011!1.63e-11!9;UBERON:0000454!1.63e-11!9;UBERON:0002308!1.86e-11!9;UBERON:0000125!1.86e-11!9;UBERON:0007023!7.41e-11!115;UBERON:0000369!5.58e-10!4;UBERON:0002435!5.58e-10!4;UBERON:0000204!5.58e-10!4;UBERON:0010082!5.58e-10!4;UBERON:0009663!1.05e-09!7;UBERON:0002298!1.29e-08!8;UBERON:0000349!1.67e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.74e-11;49!UBERON:0001950;4.30e-10;20!UBERON:0002619;2.86e-09;22!UBERON:0002114;1.12e-08;2!UBERON:0000956;2.86e-08;25!UBERON:0000203;2.86e-08;25!UBERON:0001003;6.59e-07;15!UBERON:0007376;6.59e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.30e-10,20;UBERON:0002619,2.86e-09,22;UBERON:0002114,1.12e-08,2;UBERON:0000956,2.86e-08,25;UBERON:0000203,2.86e-08,25;UBERON:0000955,5.04e-08,68;UBERON:0006238,5.04e-08,68;UBERON:0010371,1.52e-07,104;UBERON:0001003,6.59e-07,15;UBERON:0007376,6.59e-07,15;UBERON:0007383,6.59e-07,15;UBERON:0001017,8.84e-07,81 | |||
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| ||
|short_description=p2@GNG8 | |||
}} | }} |
Latest revision as of 21:21, 18 September 2015
Short description: | p2@GNG8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNG8_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_ENST00000300873, NM_033258, uc010xyd.1_5end |
EntrezGene: | GNG8 |
HGNC: | 19664 |
UniProt: | Q9UK08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.55e-45 | 2 |
keratinocyte | 7.92e-19 | 5 |
stratified squamous epithelial cell | 7.23e-16 | 6 |
keratin accumulating cell | 7.23e-16 | 6 |
stratified epithelial cell | 7.23e-16 | 6 |
keratinizing barrier epithelial cell | 7.23e-16 | 6 |
epithelial fate stem cell | 7.23e-16 | 6 |
stratified epithelial stem cell | 7.23e-16 | 6 |
surface ectodermal cell | 7.23e-16 | 6 |
neuron associated cell | 3.80e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 3.80e-11 | 17 |
epidermal cell | 6.54e-11 | 9 |
neural cell | 5.00e-08 | 25 |
general ecto-epithelial cell | 2.44e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neocortex | 4.30e-10 | 20 |
regional part of cerebral cortex | 2.86e-09 | 22 |
duodenum | 1.12e-08 | 2 |
cerebral cortex | 2.86e-08 | 25 |
pallium | 2.86e-08 | 25 |
brain | 5.04e-08 | 68 |
future brain | 5.04e-08 | 68 |
ecto-epithelium | 1.52e-07 | 104 |
skin epidermis | 6.59e-07 | 15 |
outer epithelium | 6.59e-07 | 15 |
enveloping layer of ectoderm | 6.59e-07 | 15 |
central nervous system | 8.84e-07 | 81 |