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{{UBERON
{{UBERON
|id=UBERON:0001774
|alt_id=UBERON:FMA_58274-MA_0000514
|name=muscle of trunk
|anatomical_img_id=FMA:58274
|namespace=
|def="Muscle organ which is a part of the trunk. Examples: external intercostal muscle, external oblique, levator ani." []
|xref=AAO:0000611;;EFO:0003531;;FMA:58274;;MA:0000514;;XAO:0003230;;ZFA:0000473
|is_a=UBERON:0001630;;UBERON:0005177
|synonym="body musculature" EXACT [ZFA:0000473];;"muscle organ of torso" EXACT [OBOL:automatic];;"muscle organ of trunk" EXACT [OBOL:automatic];;"torso muscle organ" EXACT [OBOL:automatic];;"trunk muscle" EXACT [];;"trunk muscle organ" EXACT [OBOL:automatic];;"trunk musculature" EXACT []
|comment=TODO - check muscle organ vs musculature
|comment=TODO - check muscle organ vs musculature
|alt_id=UBERON:FMA_58274-MA_0000514
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Muscle organ which is a part of the trunk. Examples: external intercostal muscle, external oblique, levator ani." []
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001774
|is_a=UBERON:0001630;;UBERON:0005177
|is_obsolete=
|located_in=
|located_in=
|name=muscle of trunk
|namespace=
|obo_creation_date=
|part_of=UBERON:0002100
|part_of=UBERON:0002100
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim;;vertebrate_core
|preceded_by=
|synonym="body musculature" EXACT [ZFA:0000473];;"muscle organ of torso" EXACT [OBOL:automatic];;"muscle organ of trunk" EXACT [OBOL:automatic];;"torso muscle organ" EXACT [OBOL:automatic];;"trunk muscle" EXACT [];;"trunk muscle organ" EXACT [OBOL:automatic];;"trunk musculature" EXACT []
|union_of=
|xref=AAO:0000611;;EFO:0003531;;FMA:58274;;MA:0000514;;TAO:0000473;;XAO:0003230;;ZFA:0000473
}}
}}

Latest revision as of 18:39, 29 November 2012

Name:muscle of trunk
Definition:"Muscle organ which is a part of the trunk. Examples: external intercostal muscle, external oblique, levator ani." []
Xrefs:
links:

AAO:0000611
EFO:0003531
FMA:58274
MA:0000514
TAO:0000473
XAO:0003230

ZFA:0000473
Synonyms: "body musculature" EXACT [ZFA:0000473]
"muscle organ of torso" EXACT [OBOL:automatic]
"muscle organ of trunk" EXACT [OBOL:automatic]
"torso muscle organ" EXACT [OBOL:automatic]
"trunk muscle" EXACT []
"trunk muscle organ" EXACT [OBOL:automatic]
"trunk musculature" EXACT []
Comments:TODO - check muscle organ vs musculature
Alt_id: UBERON:FMA_58274-MA_0000514
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001630(muscle organ),UBERON:0005177(trunk region element)
part_of:UBERON:0002100(trunk)



Children

is a:UBERON:0003830 (thoracic segment muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001774 (muscle of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_cd5a52e230e8f4ed74145332512d8cb2p@chr18:10458574..10458579, -
5.42e-195FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_cd5a52e230e8f4ed74145332512d8cb2p@chr18:10458574..10458579, -
2.55e-98FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_213c7793a1f0bebf376843011f40d599p@chr17:10428881..10428898, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_213c7793a1f0bebf376843011f40d599p@chr1:223065647..223065654, +
2.55e-98FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-5
2.55e-98FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_213c7793a1f0bebf376843011f40d599p1@KRTAP9-8
2.55e-98FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_213c7793a1f0bebf376843011f40d599p@chr17:10428881..10428898, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_213c7793a1f0bebf376843011f40d599p@chr1:223065647..223065654, +
2.55e-98FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-5
2.55e-98FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_213c7793a1f0bebf376843011f40d599p@chr20:31571662..31571664, +
2.55e-98FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_213c7793a1f0bebf376843011f40d599p@chr1:223065664..223065673, +
2.55e-98FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-3
2.55e-98FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_213c7793a1f0bebf376843011f40d599p@chr9:101832711..101832718, +
2.55e-98FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_213c7793a1f0bebf376843011f40d599p@chr20:31571662..31571664, +
2.55e-98FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_213c7793a1f0bebf376843011f40d599p@chr1:223065664..223065673, +
2.55e-98FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-3
2.55e-98FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_213c7793a1f0bebf376843011f40d599p13@BOC
2.55e-98FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_213c7793a1f0bebf376843011f40d599p@chr8:115584851..115584862, +
2.55e-98FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-2
2.55e-98FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_213c7793a1f0bebf376843011f40d599p13@BOC
2.55e-98FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_213c7793a1f0bebf376843011f40d599p19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_213c7793a1f0bebf376843011f40d599p1@KRTAP4-2
2.55e-98FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_213c7793a1f0bebf376843011f40d599p@chr9:101832711..101832718, +
2.55e-98FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_213c7793a1f0bebf376843011f40d599p1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_213c7793a1f0bebf376843011f40d599p19@PYGM
2.55e-98FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_213c7793a1f0bebf376843011f40d599p1@KRTAP9-3, p1@KRTAP9-9
2.55e-98FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_213c7793a1f0bebf376843011f40d599p@chr8:115584851..115584862, +
2.55e-98FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_213c7793a1f0bebf376843011f40d599p1@KRTAP9-8
1.23e-66FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p4@RPUSD4
1.23e-66FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p6@PPP3CB
1.23e-66FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_e4f5b08e4c7edc8edce3eaf5e61503d6p@chr19:50994855..50994864, -
1.23e-66FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_e4f5b08e4c7edc8edce3eaf5e61503d6p@chr12:102075405..102075407, +
1.23e-66FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_e4f5b08e4c7edc8edce3eaf5e61503d6p@chr12:102075405..102075407, +
2.39e-66FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179588230..179588237, -
2.39e-66FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_2eda16666808caa5cff9c3eb3732a209p@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_2eda16666808caa5cff9c3eb3732a209p@chr10:99343436..99343448, +
2.39e-66FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_2eda16666808caa5cff9c3eb3732a209p@chr10:99343436..99343448, +
2.39e-66FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_2eda16666808caa5cff9c3eb3732a209p23@TNNT3
2.39e-66FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_2eda16666808caa5cff9c3eb3732a209p@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_2eda16666808caa5cff9c3eb3732a209p@chr7:123241760..123241766, -
2.39e-66FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179548750..179548755, -
2.39e-66FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179588230..179588237, -
2.39e-66FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_2eda16666808caa5cff9c3eb3732a209p@chr10:24407264..24407270, -
2.39e-66FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_2eda16666808caa5cff9c3eb3732a209p47@RBPJ
2.39e-66FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179542420..179542428, -
2.39e-66FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_2eda16666808caa5cff9c3eb3732a209p23@TNNT3
2.39e-66FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179548750..179548755, -
2.39e-66FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_2eda16666808caa5cff9c3eb3732a209p19@ADCY2
2.39e-66FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_2eda16666808caa5cff9c3eb3732a209p@chr2:179542420..179542428, -
2.39e-66FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_2eda16666808caa5cff9c3eb3732a209p19@ADCY2
2.39e-66FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_2eda16666808caa5cff9c3eb3732a209p3@PGPEP1L
2.39e-66FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_2eda16666808caa5cff9c3eb3732a209p@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_2eda16666808caa5cff9c3eb3732a209p@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_2eda16666808caa5cff9c3eb3732a209p3@PGPEP1L
2.39e-66FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_2eda16666808caa5cff9c3eb3732a209p47@RBPJ
2.39e-66FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_2eda16666808caa5cff9c3eb3732a209p@chr19:50997736..50997745, -
2.39e-66FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_2eda16666808caa5cff9c3eb3732a209p@chr12:68185216..68185218, +
2.39e-66FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_2eda16666808caa5cff9c3eb3732a209p5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_2eda16666808caa5cff9c3eb3732a209p@chr17:10533450..10533457, +
2.39e-66FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_2eda16666808caa5cff9c3eb3732a209p@chr7:123241760..123241766, -
2.39e-66FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_2eda16666808caa5cff9c3eb3732a209p5@OTOF
2.39e-66FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_2eda16666808caa5cff9c3eb3732a209p@chr14:97684658..97684662, +
2.39e-66FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_2eda16666808caa5cff9c3eb3732a209p@chr17:10533450..10533457, +
4.66e-66FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@FABP9
4.66e-66FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr17:10544511..10544520, -
4.66e-66FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT33A
4.66e-66FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152393686..152393693, -
4.66e-66FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152514527..152514536, -
4.66e-66FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152476098..152476105, -
4.66e-66FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT33A
4.66e-66FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT25
4.66e-66FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152514527..152514536, -
4.66e-66FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_86faed7dea303f2dbd59ba37b1b2eb85p4@KRT86
4.66e-66FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_86faed7dea303f2dbd59ba37b1b2eb85p4@KRT86
4.66e-66FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT25
4.66e-66FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_86faed7dea303f2dbd59ba37b1b2eb85p14@FLT1
4.66e-66FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152419209..152419216, -
4.66e-66FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_86faed7dea303f2dbd59ba37b1b2eb85p14@FLT1
4.66e-66FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@KRT27
4.66e-66FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_86faed7dea303f2dbd59ba37b1b2eb85p34@XIRP2
4.66e-66FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_86faed7dea303f2dbd59ba37b1b2eb85p28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_86faed7dea303f2dbd59ba37b1b2eb85p1@FABP9
4.66e-66FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152419209..152419216, -
4.66e-66FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152342364..152342373, -
4.66e-66FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_86faed7dea303f2dbd59ba37b1b2eb85p34@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_86faed7dea303f2dbd59ba37b1b2eb85p28@XIRP2
4.66e-66FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_86faed7dea303f2dbd59ba37b1b2eb85p@chr2:152342364..152342373, -
1.46e-50FFCP PHASE2:Hg19::chrX:21672387..21672391,-#_09cf63b062c8c080a0af3fe10ab97d91p@chrX:21672387..21672391, -
1.46e-50FFCP PHASE1:Hg19::chr10:35104131..35104138,-#_09cf63b062c8c080a0af3fe10ab97d91p4@PARD3
1.46e-50FFCP PHASE2:Hg19::chr10:35104131..35104138,-#_09cf63b062c8c080a0af3fe10ab97d91p4@PARD3
1.46e-50FFCP PHASE2:Hg19::chr22:32647133..32647135,-#_09cf63b062c8c080a0af3fe10ab97d91p@chr22:32647133..32647135, -
1.46e-50FFCP PHASE1:Hg19::chr22:32647133..32647135,-#_09cf63b062c8c080a0af3fe10ab97d91p@chr22:32647133..32647135, -
1.46e-50FFCP PHASE2:Hg19::chr11:94476841..94476846,+#_09cf63b062c8c080a0af3fe10ab97d91p@chr11:94476841..94476846, +

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