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{{UBERON
{{UBERON
|id=UBERON:0005340
|alt_id=
|name=dorsal telencephalic commissure
|namespace=
|def="the fiber tracts that connect the dorsal region of the two cerebral hemispheres and span the longitudinal fissure, including the corpus callosum and hippocampal commissure[MP]." [MP:0008219]
|xref=
|is_a=UBERON:0001020
|synonym="dorsal commissure" EXACT [MP:0008219]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the fiber tracts that connect the dorsal region of the two cerebral hemispheres and span the longitudinal fissure, including the corpus callosum and hippocampal commissure[MP]." [MP:0008219]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005340
|is_a=UBERON:0005970 ;;UBERON:0010314
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=dorsal telencephalic commissure
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001893
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="dorsal commissure" EXACT [MP:0008219]
|union_of=
|xref=
}}
}}

Latest revision as of 17:52, 12 September 2014

Name:dorsal telencephalic commissure
Namespace:FANTOM
Definition:"the fiber tracts that connect the dorsal region of the two cerebral hemispheres and span the longitudinal fissure, including the corpus callosum and hippocampal commissure[MP]." [MP:0008219]
Synonyms: "dorsal commissure" EXACT [MP:0008219]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005970(brain commissure),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0001893(telencephalon)



Children

is a:UBERON:0002336 (corpus callosum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005340 (dorsal telencephalic commissure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr15:93827399..93827403,+#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr15:93827399..93827403,+#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr15:93827399..93827403, +
5.42e-195FFCP PHASE2:Hg19::chr17:73689469..73689476,-#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE1:Hg19::chr14:36462819..36462832,+#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE2:Hg19::chr14:36462819..36462832,+#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr14:36462819..36462832, +
5.42e-195FFCP PHASE1:Hg19::chr17:73689469..73689476,-#_9ec67a9fa4e46b17bcc9c28b4df7ef92p@chr17:73689469..73689476, -
5.42e-195FFCP PHASE2:Hg19::chr5:60927228..60927236,-#_9ec67a9fa4e46b17bcc9c28b4df7ef92p3@BC032909, p3@BC032910
5.42e-195FFCP PHASE1:Hg19::chr5:60927228..60927236,-#_9ec67a9fa4e46b17bcc9c28b4df7ef92p3@BC032909, p3@BC032910
9.37e-99FFCP PHASE1:Hg19::chr2:232548018..232548022,-#_f6f229fd608537b9d1efcac89553b532p@chr2:232548018..232548022, -
9.37e-99FFCP PHASE2:Hg19::chr14:33926303..33926307,-#_f6f229fd608537b9d1efcac89553b532p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE1:Hg19::chr14:33926303..33926307,-#_f6f229fd608537b9d1efcac89553b532p@chr14:33926303..33926307, -
9.37e-99FFCP PHASE2:Hg19::chr12:78359873..78359882,+#_f6f229fd608537b9d1efcac89553b532p41@NAV3
9.37e-99FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_f6f229fd608537b9d1efcac89553b532p41@NAV3
9.37e-99FFCP PHASE2:Hg19::chr11:110248322..110248329,-#_f6f229fd608537b9d1efcac89553b532p@chr11:110248322..110248329, -
9.37e-99FFCP PHASE1:Hg19::chr11:110248322..110248329,-#_f6f229fd608537b9d1efcac89553b532p@chr11:110248322..110248329, -
9.37e-99FFCP PHASE2:Hg19::chr2:232548018..232548022,-#_f6f229fd608537b9d1efcac89553b532p@chr2:232548018..232548022, -
2.55e-98FFCP PHASE2:Hg19::chr19:35788742..35788752,+#_c565b333308cc35ab86a12c5f25235abp@chr19:35788742..35788752, +
2.55e-98FFCP PHASE1:Hg19::chr19:35788742..35788752,+#_c565b333308cc35ab86a12c5f25235abp@chr19:35788742..35788752, +
2.55e-98FFCP PHASE2:Hg19::chr3:15374659..15374696,-#_c565b333308cc35ab86a12c5f25235abp10@SH3BP5
2.55e-98FFCP PHASE1:Hg19::chr3:15374659..15374696,-#_c565b333308cc35ab86a12c5f25235abp10@SH3BP5
1.23e-66FFCP PHASE2:Hg19::chr10:73479518..73479527,-#_a268d8f6d990712e34c6f65576bae88fp5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr7:124391226..124391235,-#_a268d8f6d990712e34c6f65576bae88fp@chr7:124391226..124391235, -
1.23e-66FFCP PHASE2:Hg19::chr12:78359680..78359686,+#_a268d8f6d990712e34c6f65576bae88fp32@NAV3
1.23e-66FFCP PHASE1:Hg19::chr12:78359680..78359686,+#_a268d8f6d990712e34c6f65576bae88fp32@NAV3
1.23e-66FFCP PHASE1:Hg19::chr10:73479518..73479527,-#_a268d8f6d990712e34c6f65576bae88fp5@C10orf105
1.23e-66FFCP PHASE1:Hg19::chr17:72823919..72823924,-#_a268d8f6d990712e34c6f65576bae88fp@chr17:72823919..72823924, -
1.23e-66FFCP PHASE2:Hg19::chr8:42037488..42037504,+#_a268d8f6d990712e34c6f65576bae88fp@chr8:42037488..42037504, +
1.23e-66FFCP PHASE1:Hg19::chr8:42037488..42037504,+#_a268d8f6d990712e34c6f65576bae88fp@chr8:42037488..42037504, +
1.23e-66FFCP PHASE2:Hg19::chr7:124391226..124391235,-#_a268d8f6d990712e34c6f65576bae88fp@chr7:124391226..124391235, -
1.23e-66FFCP PHASE2:Hg19::chr17:72823919..72823924,-#_a268d8f6d990712e34c6f65576bae88fp@chr17:72823919..72823924, -
2.39e-66FFCP PHASE2:Hg19::chr10:61043452..61043467,-#_5fa6a0663525c8868fafeb048451b7fdp16@FAM13C
2.39e-66FFCP PHASE2:Hg19::chr10:25012236..25012245,-#_5fa6a0663525c8868fafeb048451b7fdp24@ARHGAP21
2.39e-66FFCP PHASE1:Hg19::chr6:163681762..163681767,+#_5fa6a0663525c8868fafeb048451b7fdp@chr6:163681762..163681767, +
2.39e-66FFCP PHASE1:Hg19::chr10:61043452..61043467,-#_5fa6a0663525c8868fafeb048451b7fdp16@FAM13C
2.39e-66FFCP PHASE1:Hg19::chr10:25012236..25012245,-#_5fa6a0663525c8868fafeb048451b7fdp24@ARHGAP21
2.39e-66FFCP PHASE2:Hg19::chr6:163681762..163681767,+#_5fa6a0663525c8868fafeb048451b7fdp@chr6:163681762..163681767, +
4.66e-66FFCP PHASE2:Hg19::chr5:35089799..35089804,-#_a860cc033e67c3f521fbe7942131a5b4p20@PRLR
4.66e-66FFCP PHASE1:Hg19::chr8:101522298..101522305,-#_a860cc033e67c3f521fbe7942131a5b4p@chr8:101522298..101522305, -
4.66e-66FFCP PHASE2:Hg19::chr17:40120071..40120085,+#_a860cc033e67c3f521fbe7942131a5b4p15@CNP
4.66e-66FFCP PHASE2:Hg19::chr7:129015806..129015815,+#_a860cc033e67c3f521fbe7942131a5b4p@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr5:35089799..35089804,-#_a860cc033e67c3f521fbe7942131a5b4p20@PRLR
4.66e-66FFCP PHASE2:Hg19::chr5:35089832..35089839,-#_a860cc033e67c3f521fbe7942131a5b4p26@PRLR
4.66e-66FFCP PHASE2:Hg19::chr7:129012882..129012891,-#_a860cc033e67c3f521fbe7942131a5b4p@chr7:129012882..129012891, -
4.66e-66FFCP PHASE1:Hg19::chr7:129015806..129015815,+#_a860cc033e67c3f521fbe7942131a5b4p@chr7:129015806..129015815, +
4.66e-66FFCP PHASE1:Hg19::chr5:35089832..35089839,-#_a860cc033e67c3f521fbe7942131a5b4p26@PRLR
4.66e-66FFCP PHASE1:Hg19::chr17:40120071..40120085,+#_a860cc033e67c3f521fbe7942131a5b4p15@CNP
4.66e-66FFCP PHASE1:Hg19::chr7:129012882..129012891,-#_a860cc033e67c3f521fbe7942131a5b4p@chr7:129012882..129012891, -
4.66e-66FFCP PHASE2:Hg19::chr4:174293011..174293022,-#_a860cc033e67c3f521fbe7942131a5b4p@chr4:174293011..174293022, -
4.66e-66FFCP PHASE2:Hg19::chr4:645709..645712,+#_a860cc033e67c3f521fbe7942131a5b4p15@PDE6B
4.66e-66FFCP PHASE1:Hg19::chr13:99135698..99135706,+#_a860cc033e67c3f521fbe7942131a5b4p@chr13:99135698..99135706, +
4.66e-66FFCP PHASE2:Hg19::chr13:99135698..99135706,+#_a860cc033e67c3f521fbe7942131a5b4p@chr13:99135698..99135706, +
4.66e-66FFCP PHASE1:Hg19::chr14:91199850..91199861,-#_a860cc033e67c3f521fbe7942131a5b4p@chr14:91199850..91199861, -
4.66e-66FFCP PHASE2:Hg19::chr14:91199850..91199861,-#_a860cc033e67c3f521fbe7942131a5b4p@chr14:91199850..91199861, -
4.66e-66FFCP PHASE1:Hg19::chr4:174293011..174293022,-#_a860cc033e67c3f521fbe7942131a5b4p@chr4:174293011..174293022, -
4.66e-66FFCP PHASE2:Hg19::chr8:101522298..101522305,-#_a860cc033e67c3f521fbe7942131a5b4p@chr8:101522298..101522305, -
4.66e-66FFCP PHASE1:Hg19::chr4:645709..645712,+#_a860cc033e67c3f521fbe7942131a5b4p15@PDE6B
1.46e-50FFCP PHASE2:Hg19::chr6:170571770..170571782,-#_ac89301c14ddc572b02ae2cb0ccf3d18p2@LOC154449
1.46e-50FFCP PHASE1:Hg19::chr6:170571770..170571782,-#_ac89301c14ddc572b02ae2cb0ccf3d18p2@LOC154449
2.42e-50FFCP PHASE1:Hg19::chr7:30202318..30202329,+#_adb47973dedf351e7a0e3e937de5f820p@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr4:74005833..74005844,-#_adb47973dedf351e7a0e3e937de5f820p@chr4:74005833..74005844, -
2.42e-50FFCP PHASE2:Hg19::chr10:7454514..7454525,-#_adb47973dedf351e7a0e3e937de5f820p@chr10:7454514..7454525, -
2.42e-50FFCP PHASE1:Hg19::chr10:7454514..7454525,-#_adb47973dedf351e7a0e3e937de5f820p@chr10:7454514..7454525, -
2.42e-50FFCP PHASE2:Hg19::chrX:103031196..103031205,-#_adb47973dedf351e7a0e3e937de5f820p@chrX:103031196..103031205, -
2.42e-50FFCP PHASE2:Hg19::chr12:106697974..106697990,-#_adb47973dedf351e7a0e3e937de5f820p31@CKAP4
2.42e-50FFCP PHASE1:Hg19::chr12:106697974..106697990,-#_adb47973dedf351e7a0e3e937de5f820p31@CKAP4
2.42e-50FFCP PHASE2:Hg19::chr19:15751984..15751994,+#_adb47973dedf351e7a0e3e937de5f820p6@CYP4F3
2.42e-50FFCP PHASE1:Hg19::chrX:103031196..103031205,-#_adb47973dedf351e7a0e3e937de5f820p@chrX:103031196..103031205, -
2.42e-50FFCP PHASE2:Hg19::chr7:30202318..30202329,+#_adb47973dedf351e7a0e3e937de5f820p@chr7:30202318..30202329, +
2.42e-50FFCP PHASE1:Hg19::chr19:15751984..15751994,+#_adb47973dedf351e7a0e3e937de5f820p6@CYP4F3
2.42e-50FFCP PHASE2:Hg19::chr11:133996343..133996351,+#_adb47973dedf351e7a0e3e937de5f820p8@JAM3
2.42e-50FFCP PHASE2:Hg19::chr4:74005833..74005844,-#_adb47973dedf351e7a0e3e937de5f820p@chr4:74005833..74005844, -
2.42e-50FFCP PHASE1:Hg19::chr11:133996343..133996351,+#_adb47973dedf351e7a0e3e937de5f820p8@JAM3
3.99e-50FFCP PHASE1:Hg19::chr9:20927844..20927855,+#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr9:20927844..20927855, +
3.99e-50FFCP PHASE2:Hg19::chr17:36726052..36726061,-#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE1:Hg19::chr17:36726052..36726061,-#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr17:36726052..36726061, -
3.99e-50FFCP PHASE2:Hg19::chr11:45922629..45922637,+#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr11:45922629..45922637, +
3.99e-50FFCP PHASE1:Hg19::chr11:45922629..45922637,+#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr11:45922629..45922637, +
3.99e-50FFCP PHASE2:Hg19::chr6:164364681..164364684,-#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE2:Hg19::chr3:160203278..160203289,-#_ad13df7f7ef5c5f1771fda67e8ea4368p8@TRIM59
3.99e-50FFCP PHASE1:Hg19::chr3:160203278..160203289,-#_ad13df7f7ef5c5f1771fda67e8ea4368p8@TRIM59
3.99e-50FFCP PHASE1:Hg19::chr6:164364681..164364684,-#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr6:164364681..164364684, -
3.99e-50FFCP PHASE2:Hg19::chr9:20927844..20927855,+#_ad13df7f7ef5c5f1771fda67e8ea4368p@chr9:20927844..20927855, +
6.58e-50FFCP PHASE2:Hg19::chr6:133119649..133119655,-#_05c051d7347247ec563cda8acc0444f4p6@C6orf192
6.58e-50FFCP PHASE1:Hg19::chr2:219610931..219610941,+#_05c051d7347247ec563cda8acc0444f4p13@TTLL4
6.58e-50FFCP PHASE1:Hg19::chr12:99288459..99288464,-#_05c051d7347247ec563cda8acc0444f4p38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr12:99288459..99288464,-#_05c051d7347247ec563cda8acc0444f4p38@ANKS1B
6.58e-50FFCP PHASE2:Hg19::chr4:7412700..7412704,+#_05c051d7347247ec563cda8acc0444f4p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE1:Hg19::chr6:133119649..133119655,-#_05c051d7347247ec563cda8acc0444f4p6@C6orf192
6.58e-50FFCP PHASE2:Hg19::chr3:190578500..190578506,-#_05c051d7347247ec563cda8acc0444f4p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr4:7412700..7412704,+#_05c051d7347247ec563cda8acc0444f4p@chr4:7412700..7412704, +
6.58e-50FFCP PHASE2:Hg19::chr3:10706167..10706179,-#_05c051d7347247ec563cda8acc0444f4p@chr3:10706167..10706179, -
6.58e-50FFCP PHASE2:Hg19::chrX:28605300..28605301,+#_05c051d7347247ec563cda8acc0444f4p8@IL1RAPL1
6.58e-50FFCP PHASE1:Hg19::chr3:190578500..190578506,-#_05c051d7347247ec563cda8acc0444f4p@chr3:190578500..190578506, -
6.58e-50FFCP PHASE1:Hg19::chr3:10706167..10706179,-#_05c051d7347247ec563cda8acc0444f4p@chr3:10706167..10706179, -
6.58e-50FFCP PHASE1:Hg19::chrX:28605300..28605301,+#_05c051d7347247ec563cda8acc0444f4p8@IL1RAPL1
6.58e-50FFCP PHASE2:Hg19::chr11:67190503..67190512,+#_05c051d7347247ec563cda8acc0444f4p8@CARNS1
6.58e-50FFCP PHASE2:Hg19::chr9:112191163..112191174,-#_05c051d7347247ec563cda8acc0444f4p10@PTPN3
6.58e-50FFCP PHASE2:Hg19::chr2:219610931..219610941,+#_05c051d7347247ec563cda8acc0444f4p13@TTLL4
6.58e-50FFCP PHASE2:Hg19::chr11:117585539..117585541,-#_05c051d7347247ec563cda8acc0444f4p@chr11:117585539..117585541, -
6.58e-50FFCP PHASE1:Hg19::chr9:112191163..112191174,-#_05c051d7347247ec563cda8acc0444f4p10@PTPN3

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