Personal tools

UBERON:0010133: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0010133
|alt_id=
|name=neuroendocrine gland
|namespace=
|def=
|xref=MA:0000720
|is_a=UBERON:0000073;;UBERON:0002368
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010133
|is_a=UBERON:0002368
|is_obsolete=
|located_in=
|located_in=
|name=neuroendocrine gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001016
|part_of=UBERON:0001016
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MA:0000720
}}
}}

Latest revision as of 18:08, 12 September 2014

Name:neuroendocrine gland
Namespace:FANTOM
Xrefs:
links:
MA:0000720

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002368(endocrine gland)
part_of:UBERON:0001016(nervous system)



Children

is a:UBERON:0000007 (pituitary gland),UBERON:0010134 (secretory circumventricular organ)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010133 (neuroendocrine gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.57e-195FFCP PHASE1:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9p@chr19:7979708..7979734, +
2.57e-195FFCP PHASE2:Hg19::chr19:7979708..7979734,+#_f13cd36ed01f3db2171f12b6116a6ff9p@chr19:7979708..7979734, +
1.0e-156FFCP PHASE1:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8p11@SPOCK1
1.0e-156FFCP PHASE2:Hg19::chr5:136328571..136328599,-#_5514584a7e1112c80965a17d50ebf3f8p11@SPOCK1
1.5e-156FFCP PHASE2:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56p@chr12:128210626..128210641, -
1.5e-156FFCP PHASE1:Hg19::chr12:128210626..128210641,-#_cfc62a643d1f2213b7a2455041210e56p@chr12:128210626..128210641, -
6.94e-147FFCP PHASE2:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022dp@chr19:7979677..7979703, +
6.94e-147FFCP PHASE1:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022dp@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022dp@chr19:7979644..7979653, +
6.94e-147FFCP PHASE2:Hg19::chr19:49519930..49519937,-#_439b5ab41632d127d66fbe369abc022dp@chr19:49519930..49519937, -
6.94e-147FFCP PHASE1:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022dp1@LHB
6.94e-147FFCP PHASE2:Hg19::chr19:7979644..7979653,+#_439b5ab41632d127d66fbe369abc022dp@chr19:7979644..7979653, +
6.94e-147FFCP PHASE2:Hg19::chr19:49520344..49520367,-#_439b5ab41632d127d66fbe369abc022dp1@LHB
6.94e-147FFCP PHASE1:Hg19::chr19:7979677..7979703,+#_439b5ab41632d127d66fbe369abc022dp@chr19:7979677..7979703, +
2.79e-131FFCP PHASE1:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898p@chr1:99693441..99693485, -
2.79e-131FFCP PHASE2:Hg19::chr1:99693441..99693485,-#_fcc32c2376aa500a242e848747009898p@chr1:99693441..99693485, -
1.07e-130FFCP PHASE1:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030p5@ENST00000513329
1.07e-130FFCP PHASE2:Hg19::chr5:133772179..133772191,+#_bc3de8f58559da33a88b004fc6e94030p5@ENST00000513329
1.0e-112FFCP PHASE1:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8dfp3@ENST00000443800
1.0e-112FFCP PHASE2:Hg19::chr5:141783725..141783734,+#_d8bb02656b15580ecfe68c419d3ff8dfp3@ENST00000443800
1.76e-111FFCP PHASE1:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9p2@LHX3
1.76e-111FFCP PHASE2:Hg19::chr9:139096968..139096979,-#_924e67058d0974468325bc0c706a87e9p2@LHX3
8.91e-111FFCP PHASE1:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4p@chr22:47126639..47126654, +
8.91e-111FFCP PHASE2:Hg19::chr22:47126639..47126654,+#_3171f7569b31dd41dcf17597798614a4p@chr22:47126639..47126654, +
2.76e-110FFCP PHASE2:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841p17@LRRC49
2.76e-110FFCP PHASE1:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE2:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE2:Hg19::chr4:1233005..1233017,+#_37a84fd160266237ee3bcd87757f3841p@chr4:1233005..1233017, +
2.76e-110FFCP PHASE1:Hg19::chr11:75194071..75194110,-#_37a84fd160266237ee3bcd87757f3841p@chr11:75194071..75194110, -
2.76e-110FFCP PHASE1:Hg19::chr15:71228905..71228915,+#_37a84fd160266237ee3bcd87757f3841p17@LRRC49
5.02e-99FFCP PHASE1:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088p@chr12:128210666..128210685, -
5.02e-99FFCP PHASE2:Hg19::chr12:128210666..128210685,-#_8c62d767d42a86007ecf84b7efb7b088p@chr12:128210666..128210685, -
1.38e-98FFCP PHASE1:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07bebp@chr9:139095116..139095139, +
1.38e-98FFCP PHASE2:Hg19::chr9:139095116..139095139,+#_f4da311a38164dc15ff212a45bb07bebp@chr9:139095116..139095139, +
1.55e-98FFCP PHASE1:Hg19::chr6:22287728..22287735,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr6:22287728..22287735, -
1.55e-98FFCP PHASE2:Hg19::chr11:18041199..18041200,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:18041199..18041200, -
1.55e-98FFCP PHASE1:Hg19::chr7:9178561..9178568,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr7:9178561..9178568, -
1.55e-98FFCP PHASE2:Hg19::chr11:18063669..18063678,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:18063669..18063678, -
1.55e-98FFCP PHASE1:Hg19::chr11:18067904..18067908,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:18067904..18067908, -
1.55e-98FFCP PHASE1:Hg19::chr8:135473063..135473075,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:135473063..135473075, -
1.55e-98FFCP PHASE2:Hg19::chr16:18066399..18066411,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr16:18066399..18066411, -
1.55e-98FFCP PHASE2:Hg19::chr5:119868809..119868839,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr5:119868809..119868839, +
1.55e-98FFCP PHASE2:Hg19::chr12:89881337..89881342,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr12:89881337..89881342, -
1.55e-98FFCP PHASE2:Hg19::chr1:99860786..99860791,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:99860786..99860791, -
1.55e-98FFCP PHASE2:Hg19::chr8:135504337..135504342,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:135504337..135504342, -
1.55e-98FFCP PHASE1:Hg19::chr12:99734965..99734976,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr12:99734965..99734976, -
1.55e-98FFCP PHASE1:Hg19::chr1:99860883..99860921,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:99860883..99860921, -
1.55e-98FFCP PHASE1:Hg19::chr8:135504353..135504365,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:135504353..135504365, -
1.55e-98FFCP PHASE1:Hg19::chr19:49519357..49519372,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p1@CU678753
1.55e-98FFCP PHASE2:Hg19::chr17:61996018..61996019,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p5@AB591020
1.55e-98FFCP PHASE2:Hg19::chr6:22287720..22287725,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr6:22287720..22287725, -
1.55e-98FFCP PHASE2:Hg19::chr5:158737729..158737738,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr5:158737729..158737738, -
1.55e-98FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr14:49512240..49512248, -
1.55e-98FFCP PHASE1:Hg19::chr13:52650530..52650533,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr13:52650530..52650533, -
1.55e-98FFCP PHASE2:Hg19::chr16:17930871..17930877,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr16:17930871..17930877, -
1.55e-98FFCP PHASE2:Hg19::chr4:1188439..1188454,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr4:1188439..1188454, -
1.55e-98FFCP PHASE2:Hg19::chr3:107545606..107545631,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr3:107545606..107545631, -
1.55e-98FFCP PHASE2:Hg19::chr2:216447404..216447411,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p1@ENST00000457625
1.55e-98FFCP PHASE1:Hg19::chr2:241080084..241080093,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p5@OTOS
1.55e-98FFCP PHASE1:Hg19::chr2:216447425..216447432,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p2@ENST00000457625
1.55e-98FFCP PHASE2:Hg19::chr17:61995371..61995384,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr17:61995371..61995384, +
1.55e-98FFCP PHASE1:Hg19::chr8:87751918..87751928,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:87751918..87751928, -
1.55e-98FFCP PHASE1:Hg19::chr18:56963107..56963117,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr18:56963107..56963117, -
1.55e-98FFCP PHASE1:Hg19::chr17:61995906..61995914,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p6@AB591020
1.55e-98FFCP PHASE1:Hg19::chr4:20985690..20985695,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p38@KCNIP4
1.55e-98FFCP PHASE1:Hg19::chr9:137539895..137539904,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr9:137539895..137539904, +
1.55e-98FFCP PHASE1:Hg19::chr6:22294718..22294725,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p11@PRL
1.55e-98FFCP PHASE1:Hg19::chr16:18066345..18066365,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr16:18066345..18066365, -
1.55e-98FFCP PHASE1:Hg19::chr12:121088132..121088135,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p15@CABP1
1.55e-98FFCP PHASE2:Hg19::chr13:56628548..56628553,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr13:56628548..56628553, -
1.55e-98FFCP PHASE1:Hg19::chr15:55470984..55471009,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr15:55470984..55471009, -
1.55e-98FFCP PHASE2:Hg19::chr10:18580269..18580290,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr10:18580269..18580290, +
1.55e-98FFCP PHASE1:Hg19::chr8:135473748..135473753,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:135473748..135473753, -
1.55e-98FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr7:9782610..9782613, +
1.55e-98FFCP PHASE1:Hg19::chr1:45782019..45782028,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:45782019..45782028, +
1.55e-98FFCP PHASE1:Hg19::chr6:22290440..22290455,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr6:22290440..22290455, +
1.55e-98FFCP PHASE1:Hg19::chr16:51174216..51174239,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr16:51174216..51174239, -
1.55e-98FFCP PHASE1:Hg19::chr5:135732675..135732680,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p3@ENST00000514282
1.55e-98FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr12:55422565..55422604, +
1.55e-98FFCP PHASE2:Hg19::chr1:57907030..57907050,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:57907030..57907050, +
1.55e-98FFCP PHASE1:Hg19::chr7:9194488..9194491,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr7:9194488..9194491, -
1.55e-98FFCP PHASE2:Hg19::chr13:52650486..52650491,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr13:52650486..52650491, -
1.55e-98FFCP PHASE2:Hg19::chr11:18067959..18067962,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:18067959..18067962, -
1.55e-98FFCP PHASE1:Hg19::chr1:57914395..57914398,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:57914395..57914398, +
1.55e-98FFCP PHASE2:Hg19::chr7:120842768..120842790,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr7:120842768..120842790, -
1.55e-98FFCP PHASE1:Hg19::chr8:1066886..1066919,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:1066886..1066919, +
1.55e-98FFCP PHASE2:Hg19::chr11:70178863..70178874,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:70178863..70178874, +
1.55e-98FFCP PHASE2:Hg19::chr8:135515989..135515991,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:135515989..135515991, +
1.55e-98FFCP PHASE2:Hg19::chr19:49547457..49547458,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p2@CGB5
1.55e-98FFCP PHASE2:Hg19::chr17:18021982..18021985,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p3@MYO15A
1.55e-98FFCP PHASE1:Hg19::chr7:120969099..120969104,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p3@WNT16
1.55e-98FFCP PHASE2:Hg19::chr1:45782001..45782009,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:45782001..45782009, +
1.55e-98FFCP PHASE2:Hg19::chr8:126582844..126582849,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr8:126582844..126582849, -
1.55e-98FFCP PHASE2:Hg19::chr17:61996393..61996421,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p4@CSHL1, p4@GH1
1.55e-98FFCP PHASE2:Hg19::chr6:22287815..22287820,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr6:22287815..22287820, -
1.55e-98FFCP PHASE1:Hg19::chr15:47662877..47662880,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr15:47662877..47662880, -
1.55e-98FFCP PHASE1:Hg19::chr12:55422293..55422300,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr12:55422293..55422300, +
1.55e-98FFCP PHASE1:Hg19::chr2:17040158..17040170,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr2:17040158..17040170, +
1.55e-98FFCP PHASE2:Hg19::chr11:18039672..18039678,-#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr11:18039672..18039678, -
1.55e-98FFCP PHASE2:Hg19::chr1:13820103..13820109,+#_16bda1cbf03ffc1c3e661cf4c80f9d91p@chr1:13820103..13820109, +