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{{DOID
{{DOID
|id=DOID:5861
|alt_id=
|name=myxoid chondrosarcoma
|namespace=disease_ontology
|def=
|xref=NCI:C4303;;SNOMEDCT_2010_1_31:189881008;;SNOMEDCT_2010_1_31:75622000;;UMLS_CUI:C0334551
|is_a=DOID:3371
|synonym=" Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008];;"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]
|comment=
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|created_by=
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|id=DOID:5861
|is_a=DOID:3371
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|name=myxoid chondrosarcoma
|namespace=FANTOM
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
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|preceded_by=
|synonym=" Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008];;"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]
|union_of=
|xref=NCI:C4303;;SNOMEDCT_2010_1_31:189881008;;SNOMEDCT_2010_1_31:75622000;;UMLS_CUI:C0334551
}}
}}

Latest revision as of 16:52, 12 September 2014

Name:myxoid chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

NCI:C4303
SNOMEDCT_2010_1_31:189881008
SNOMEDCT_2010_1_31:75622000

UMLS_CUI:C0334551
Synonyms: " Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189881008]
"Myxoid chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:75622000]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3371(chondrosarcoma)



Children


is a:DOID:6496 (extraskeletal myxoid chondrosarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5861 (myxoid chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr3:2141888..2141892,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141888..2141892, -
5.42e-195FFCP PHASE2:Hg19::chr14:88282738..88282741,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000554519
5.42e-195FFCP PHASE1:Hg19::chr6:152589396..152589401,-#_6ef67aad4781bdf0faef4ef7a3601b2fp68@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr8:107074457..107074458,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074457..107074458, +
5.42e-195FFCP PHASE2:Hg19::chr3:196296715..196296737,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:196296715..196296737, -
5.42e-195FFCP PHASE1:Hg19::chr1:192408018..192408032,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192408018..192408032, -
5.42e-195FFCP PHASE1:Hg19::chr12:95941674..95941679,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:95941674..95941679, +
5.42e-195FFCP PHASE1:Hg19::chr4:169935485..169935488,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:169935485..169935488, -
5.42e-195FFCP PHASE1:Hg19::chr1:145473286..145473295,+#_6ef67aad4781bdf0faef4ef7a3601b2fp5@AB464458
5.42e-195FFCP PHASE2:Hg19::chr4:139817600..139817609,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817600..139817609, -
5.42e-195FFCP PHASE2:Hg19::chr13:23027835..23027846,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027835..23027846, +
5.42e-195FFCP PHASE2:Hg19::chr15:96181408..96181419,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181408..96181419, -
5.42e-195FFCP PHASE1:Hg19::chr14:88282738..88282741,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000554519
5.42e-195FFCP PHASE2:Hg19::chr6:150735319..150735330,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735319..150735330, +
5.42e-195FFCP PHASE1:Hg19::chr8:107074411..107074421,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074411..107074421, +
5.42e-195FFCP PHASE1:Hg19::chr1:198595896..198595910,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:198595896..198595910, +
5.42e-195FFCP PHASE1:Hg19::chr1:112916133..112916138,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:112916133..112916138, -
5.42e-195FFCP PHASE1:Hg19::chr10:63700043..63700053,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700043..63700053, +
5.42e-195FFCP PHASE2:Hg19::chr3:30570717..30570723,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:30570717..30570723, -
5.42e-195FFCP PHASE2:Hg19::chr3:127441501..127441504,-#_6ef67aad4781bdf0faef4ef7a3601b2fp59@MGLL
5.42e-195FFCP PHASE2:Hg19::chr12:71031372..71031377,-#_6ef67aad4781bdf0faef4ef7a3601b2fp25@PTPRB
5.42e-195FFCP PHASE1:Hg19::chr6:150735014..150735021,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735014..150735021, -
5.42e-195FFCP PHASE1:Hg19::chr11:30105969..30105977,-#_6ef67aad4781bdf0faef4ef7a3601b2fp1@ENST00000527819
5.42e-195FFCP PHASE1:Hg19::chr20:36848135..36848142,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr20:36848135..36848142, -
5.42e-195FFCP PHASE2:Hg19::chr3:2141759..2141771,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141759..2141771, -
5.42e-195FFCP PHASE1:Hg19::chr9:13006722..13006729,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:13006722..13006729, -
5.42e-195FFCP PHASE1:Hg19::chr4:139817573..139817580,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:139817573..139817580, -
5.42e-195FFCP PHASE1:Hg19::chr10:33244345..33244348,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:33244345..33244348, -
5.42e-195FFCP PHASE1:Hg19::chr13:23027835..23027846,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027835..23027846, +
5.42e-195FFCP PHASE2:Hg19::chr7:18439510..18439521,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439510..18439521, +
5.42e-195FFCP PHASE1:Hg19::chr15:96181408..96181419,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181408..96181419, -
5.42e-195FFCP PHASE2:Hg19::chr6:152592460..152592465,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:152592460..152592465, -
5.42e-195FFCP PHASE2:Hg19::chr2:175629357..175629367,-#_6ef67aad4781bdf0faef4ef7a3601b2fp6@CHRNA1
5.42e-195FFCP PHASE2:Hg19::chr3:157230506..157230511,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157230506..157230511, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407879..192407891,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192407879..192407891, -
5.42e-195FFCP PHASE1:Hg19::chr7:18439468..18439477,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr7:18439468..18439477, +
5.42e-195FFCP PHASE1:Hg19::chrX:135338329..135338337,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:135338329..135338337, -
5.42e-195FFCP PHASE2:Hg19::chr3:2140207..2140208,+#_6ef67aad4781bdf0faef4ef7a3601b2fp34@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:145471703..145471706,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:145471703..145471706, +
5.42e-195FFCP PHASE2:Hg19::chr13:23733607..23733611,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733607..23733611, -
5.42e-195FFCP PHASE1:Hg19::chr7:79999046..79999051,+#_6ef67aad4781bdf0faef4ef7a3601b2fp41@CD36
5.42e-195FFCP PHASE1:Hg19::chr3:1577628..1577634,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577628..1577634, -
5.42e-195FFCP PHASE1:Hg19::chr1:197873492..197873502,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197873492..197873502, -
5.42e-195FFCP PHASE2:Hg19::chr11:30257128..30257133,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589315..152589320,-#_6ef67aad4781bdf0faef4ef7a3601b2fp72@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr3:2141813..2141822,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:2141813..2141822, -
5.42e-195FFCP PHASE1:Hg19::chr2:74780643..74780673,-#_6ef67aad4781bdf0faef4ef7a3601b2fp30@LOXL3
5.42e-195FFCP PHASE2:Hg19::chr2:188420455..188420469,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:188420455..188420469, +
5.42e-195FFCP PHASE2:Hg19::chr10:33244066..33244083,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:33244066..33244083, -
5.42e-195FFCP PHASE1:Hg19::chr6:152589291..152589303,-#_6ef67aad4781bdf0faef4ef7a3601b2fp38@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr5:109694595..109694599,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:109694595..109694599, +
5.42e-195FFCP PHASE2:Hg19::chr13:23169005..23169009,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23169005..23169009, +
5.42e-195FFCP PHASE1:Hg19::chr3:157221979..157222025,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157221979..157222025, -
5.42e-195FFCP PHASE1:Hg19::chr17:46178195..46178202,-#_6ef67aad4781bdf0faef4ef7a3601b2fp12@CBX1
5.42e-195FFCP PHASE2:Hg19::chr9:79634044..79634053,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:79634044..79634053, -
5.42e-195FFCP PHASE1:Hg19::chr9:18504821..18504825,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:18504821..18504825, +
5.42e-195FFCP PHASE1:Hg19::chr3:2140149..2140157,+#_6ef67aad4781bdf0faef4ef7a3601b2fp25@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:228783266..228783269,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:228783266..228783269, -
5.42e-195FFCP PHASE1:Hg19::chr13:23733607..23733611,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23733607..23733611, -
5.42e-195FFCP PHASE1:Hg19::chr1:43637641..43637648,-#_6ef67aad4781bdf0faef4ef7a3601b2fp16@EBNA1BP2
5.42e-195FFCP PHASE1:Hg19::chr11:30253410..30253431,+#_6ef67aad4781bdf0faef4ef7a3601b2fp2@FSHB
5.42e-195FFCP PHASE1:Hg19::chr1:172009977..172009985,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:172009977..172009985, +
5.42e-195FFCP PHASE2:Hg19::chr18:22251681..22251685,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:22251681..22251685, -
5.42e-195FFCP PHASE2:Hg19::chr12:80818259..80818266,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:80818259..80818266, +
5.42e-195FFCP PHASE1:Hg19::chr13:23169005..23169009,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23169005..23169009, +
5.42e-195FFCP PHASE2:Hg19::chr18:74535969..74535980,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535969..74535980, -
5.42e-195FFCP PHASE1:Hg19::chr2:53436150..53436154,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:53436150..53436154, -
5.42e-195FFCP PHASE1:Hg19::chr21:38309134..38309135,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr21:38309134..38309135, -
5.42e-195FFCP PHASE2:Hg19::chr3:1577545..1577547,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:1577545..1577547, -
5.42e-195FFCP PHASE1:Hg19::chr18:74535888..74535894,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:74535888..74535894, -
5.42e-195FFCP PHASE2:Hg19::chr2:206927652..206927658,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr2:206927652..206927658, -
5.42e-195FFCP PHASE1:Hg19::chr5:128083931..128083952,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr5:128083931..128083952, +
5.42e-195FFCP PHASE2:Hg19::chr9:18993581..18993586,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr9:18993581..18993586, -
5.42e-195FFCP PHASE2:Hg19::chr13:23734279..23734283,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23734279..23734283, +
5.42e-195FFCP PHASE1:Hg19::chr3:170537826..170537835,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:170537826..170537835, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141982..2141990,+#_6ef67aad4781bdf0faef4ef7a3601b2fp16@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr3:106921055..106921063,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:106921055..106921063, -
5.42e-195FFCP PHASE2:Hg19::chr1:154942216..154942223,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942216..154942223, -
5.42e-195FFCP PHASE1:Hg19::chrX:591202..591211,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chrX:591202..591211, -
5.42e-195FFCP PHASE2:Hg19::chr3:99508248..99508255,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:99508248..99508255, -
5.42e-195FFCP PHASE2:Hg19::chr3:157206082..157206087,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157206082..157206087, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141949..2141956,+#_6ef67aad4781bdf0faef4ef7a3601b2fp21@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:154942206..154942211,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:154942206..154942211, -
5.42e-195FFCP PHASE1:Hg19::chr12:70351934..70351939,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:70351934..70351939, +
5.42e-195FFCP PHASE1:Hg19::chr6:152589452..152589462,-#_6ef67aad4781bdf0faef4ef7a3601b2fp43@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr1:113250450..113250457,-#_6ef67aad4781bdf0faef4ef7a3601b2fp18@RHOC
5.42e-195FFCP PHASE1:Hg19::chr3:157231406..157231414,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:157231406..157231414, -
5.42e-195FFCP PHASE1:Hg19::chr1:192444852..192444861,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:192444852..192444861, +
5.42e-195FFCP PHASE1:Hg19::chr12:46884845..46884851,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr12:46884845..46884851, +
5.42e-195FFCP PHASE1:Hg19::chr1:145473297..145473306,+#_6ef67aad4781bdf0faef4ef7a3601b2fp7@AB464458
5.42e-195FFCP PHASE1:Hg19::chr13:23734279..23734283,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23734279..23734283, +
5.42e-195FFCP PHASE2:Hg19::chr1:197889977..197890013,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr1:197889977..197890013, +
5.42e-195FFCP PHASE2:Hg19::chr13:23027882..23027888,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr13:23027882..23027888, +
5.42e-195FFCP PHASE2:Hg19::chr18:22253588..22253590,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr18:22253588..22253590, +
5.42e-195FFCP PHASE2:Hg19::chr15:96181421..96181428,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr15:96181421..96181428, -
5.42e-195FFCP PHASE2:Hg19::chr6:150735340..150735361,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr6:150735340..150735361, +
5.42e-195FFCP PHASE2:Hg19::chr4:72885984..72885997,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr4:72885984..72885997, -
5.42e-195FFCP PHASE1:Hg19::chr8:107074457..107074458,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr8:107074457..107074458, +
5.42e-195FFCP PHASE1:Hg19::chr3:196296715..196296737,-#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr3:196296715..196296737, -
5.42e-195FFCP PHASE1:Hg19::chr10:63700076..63700086,+#_6ef67aad4781bdf0faef4ef7a3601b2fp@chr10:63700076..63700086, +

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