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DOID:3371

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Name:chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

MSH:D002813
NCI:C2946
OMIM:215300
SNOMEDCT_2010_1_31:134336003
SNOMEDCT_2010_1_31:14990007
SNOMEDCT_2010_1_31:189886003
SNOMEDCT_2010_1_31:443520009
UMLS_CUI:C0008479

UMLS_CUI:C1335473
Synonyms: "chondrosarcoma" EXACT [NCI2004_11_17:C2946]
"chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:14990007]
"chondrosarcoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189886003]
"chondrosarcoma of bone" EXACT [SNOMEDCT_2005_07_31:134336003]
"primary chondrosarcoma of bone" EXACT []
"primary chondrosarcoma of the bone" EXACT [NCI2004_11_17:C7155]
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:3370

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:201(connective tissue cancer)



Children


is a:FF:10720-109I9 (),DOID:4549 (extraosseous chondrosarcoma),DOID:5861 (myxoid chondrosarcoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3371 (chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr18:74535888..74535894,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr18:74535888..74535894, -
5.42e-195FFCP PHASE2:Hg19::chr7:94540075..94540082,+#_a94794a00b78c9028f3bf3b1af3efa58p21@PPP1R9A
5.42e-195FFCP PHASE2:Hg19::chr12:71031325..71031332,-#_a94794a00b78c9028f3bf3b1af3efa58p19@PTPRB
5.42e-195FFCP PHASE2:Hg19::chr3:1577545..1577547,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:1577545..1577547, -
5.42e-195FFCP PHASE2:Hg19::chr2:206927652..206927658,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr2:206927652..206927658, -
5.42e-195FFCP PHASE1:Hg19::chr20:36848135..36848142,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr20:36848135..36848142, -
5.42e-195FFCP PHASE2:Hg19::chr15:95751475..95751482,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr15:95751475..95751482, +
5.42e-195FFCP PHASE1:Hg19::chr3:170537826..170537835,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:170537826..170537835, +
5.42e-195FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr5:33361438..33361453, -
5.42e-195FFCP PHASE2:Hg19::chr3:106921055..106921063,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:106921055..106921063, -
5.42e-195FFCP PHASE1:Hg19::chr14:83319766..83319776,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr14:83319766..83319776, -
5.42e-195FFCP PHASE2:Hg19::chr3:157206082..157206087,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:157206082..157206087, -
5.42e-195FFCP PHASE2:Hg19::chr1:192407879..192407891,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:192407879..192407891, -
5.42e-195FFCP PHASE2:Hg19::chr12:46884845..46884851,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:46884845..46884851, +
5.42e-195FFCP PHASE1:Hg19::chr3:157231406..157231414,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:157231406..157231414, -
5.42e-195FFCP PHASE1:Hg19::chr10:63700043..63700053,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr10:63700043..63700053, +
5.42e-195FFCP PHASE2:Hg19::chr1:145473297..145473306,+#_a94794a00b78c9028f3bf3b1af3efa58p7@AB464458
5.42e-195FFCP PHASE1:Hg19::chr1:197873492..197873502,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:197873492..197873502, -
5.42e-195FFCP PHASE2:Hg19::chr12:70351971..70351975,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:70351971..70351975, +
5.42e-195FFCP PHASE1:Hg19::chr1:228783266..228783269,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:228783266..228783269, -
5.42e-195FFCP PHASE2:Hg19::chr3:127441545..127441550,-#_a94794a00b78c9028f3bf3b1af3efa58p58@MGLL
5.42e-195FFCP PHASE1:Hg19::chr1:145473286..145473295,+#_a94794a00b78c9028f3bf3b1af3efa58p5@AB464458
5.42e-195FFCP PHASE1:Hg19::chr6:150735340..150735361,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:150735340..150735361, +
5.42e-195FFCP PHASE2:Hg19::chr14:88338702..88338713,-#_a94794a00b78c9028f3bf3b1af3efa58p1@ENST00000554305
5.42e-195FFCP PHASE2:Hg19::chr10:63700043..63700053,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr10:63700043..63700053, +
5.42e-195FFCP PHASE1:Hg19::chr10:33244345..33244348,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr10:33244345..33244348, -
5.42e-195FFCP PHASE2:Hg19::chr6:152590257..152590288,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:152590257..152590288, -
5.42e-195FFCP PHASE2:Hg19::chr13:23733478..23733489,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr13:23733478..23733489, -
5.42e-195FFCP PHASE1:Hg19::chr12:71031310..71031321,-#_a94794a00b78c9028f3bf3b1af3efa58p14@PTPRB
5.42e-195FFCP PHASE1:Hg19::chr9:12848028..12848033,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr9:12848028..12848033, -
5.42e-195FFCP PHASE1:Hg19::chr3:196296715..196296737,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:196296715..196296737, -
5.42e-195FFCP PHASE1:Hg19::chr11:30105969..30105977,-#_a94794a00b78c9028f3bf3b1af3efa58p1@ENST00000527819
5.42e-195FFCP PHASE1:Hg19::chr12:89917192..89917200,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:89917192..89917200, -
5.42e-195FFCP PHASE1:Hg19::chr21:38309134..38309135,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr21:38309134..38309135, -
5.42e-195FFCP PHASE2:Hg19::chr4:169935479..169935481,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr4:169935479..169935481, -
5.42e-195FFCP PHASE1:Hg19::chr1:43637641..43637648,-#_a94794a00b78c9028f3bf3b1af3efa58p16@EBNA1BP2
5.42e-195FFCP PHASE1:Hg19::chr7:18439523..18439524,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr7:18439523..18439524, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141862..2141887,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:2141862..2141887, -
5.42e-195FFCP PHASE2:Hg19::chr10:33244345..33244348,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr10:33244345..33244348, -
5.42e-195FFCP PHASE1:Hg19::chr3:127441501..127441504,-#_a94794a00b78c9028f3bf3b1af3efa58p59@MGLL
5.42e-195FFCP PHASE1:Hg19::chr1:172009977..172009985,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:172009977..172009985, +
5.42e-195FFCP PHASE2:Hg19::chr3:99680705..99680734,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:99680705..99680734, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141775..2141783,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:2141775..2141783, -
5.42e-195FFCP PHASE2:Hg19::chr11:30105969..30105977,-#_a94794a00b78c9028f3bf3b1af3efa58p1@ENST00000527819
5.42e-195FFCP PHASE2:Hg19::chr6:96913362..96913393,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:96913362..96913393, -
5.42e-195FFCP PHASE1:Hg19::chr1:112916133..112916138,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:112916133..112916138, -
5.42e-195FFCP PHASE1:Hg19::chr14:87689429..87689432,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr6:142993137..142993142,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:142993137..142993142, +
5.42e-195FFCP PHASE2:Hg19::chr3:157230582..157230593,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:157230582..157230593, +
5.42e-195FFCP PHASE2:Hg19::chr12:80818234..80818245,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:80818234..80818245, +
5.42e-195FFCP PHASE1:Hg19::chr3:2141982..2141990,+#_a94794a00b78c9028f3bf3b1af3efa58p16@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr6:152589345..152589353,-#_a94794a00b78c9028f3bf3b1af3efa58p63@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr2:175629357..175629367,-#_a94794a00b78c9028f3bf3b1af3efa58p6@CHRNA1
5.42e-195FFCP PHASE1:Hg19::chr15:96181433..96181441,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr15:96181433..96181441, -
5.42e-195FFCP PHASE2:Hg19::chr3:2140234..2140235,+#_a94794a00b78c9028f3bf3b1af3efa58p36@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr12:70636933..70636940,+#_a94794a00b78c9028f3bf3b1af3efa58p28@CNOT2
5.42e-195FFCP PHASE2:Hg19::chr1:154942216..154942223,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:154942216..154942223, -
5.42e-195FFCP PHASE2:Hg19::chr9:13006722..13006729,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr9:13006722..13006729, -
5.42e-195FFCP PHASE1:Hg19::chr3:2140207..2140208,+#_a94794a00b78c9028f3bf3b1af3efa58p34@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr11:30253410..30253431,+#_a94794a00b78c9028f3bf3b1af3efa58p2@FSHB
5.42e-195FFCP PHASE1:Hg19::chr3:2141759..2141771,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:2141759..2141771, -
5.42e-195FFCP PHASE1:Hg19::chr1:154942206..154942211,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:154942206..154942211, -
5.42e-195FFCP PHASE2:Hg19::chr12:95941674..95941679,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:95941674..95941679, +
5.42e-195FFCP PHASE2:Hg19::chr2:188420470..188420480,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr2:188420470..188420480, +
5.42e-195FFCP PHASE2:Hg19::chr3:30442082..30442087,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:30442082..30442087, -
5.42e-195FFCP PHASE1:Hg19::chr3:99508248..99508255,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:99508248..99508255, -
5.42e-195FFCP PHASE2:Hg19::chrX:135338329..135338337,-#_a94794a00b78c9028f3bf3b1af3efa58p@chrX:135338329..135338337, -
5.42e-195FFCP PHASE1:Hg19::chr3:157230506..157230511,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:157230506..157230511, +
5.42e-195FFCP PHASE2:Hg19::chr1:145471703..145471706,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:145471703..145471706, +
5.42e-195FFCP PHASE1:Hg19::chr1:192444852..192444861,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:192444852..192444861, +
5.42e-195FFCP PHASE1:Hg19::chr12:79920639..79920642,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:79920639..79920642, -
5.42e-195FFCP PHASE2:Hg19::chr7:80080929..80080934,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr7:80080929..80080934, +
5.42e-195FFCP PHASE2:Hg19::chr9:18504821..18504825,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr9:18504821..18504825, +
5.42e-195FFCP PHASE1:Hg19::chr4:72885984..72885997,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr4:72885984..72885997, -
5.42e-195FFCP PHASE2:Hg19::chr14:88282738..88282741,-#_a94794a00b78c9028f3bf3b1af3efa58p1@ENST00000554519
5.42e-195FFCP PHASE2:Hg19::chr3:177555440..177555446,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:177555440..177555446, -
5.42e-195FFCP PHASE2:Hg19::chr1:197889977..197890013,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr1:197889977..197890013, +
5.42e-195FFCP PHASE1:Hg19::chrX:135338397..135338402,-#_a94794a00b78c9028f3bf3b1af3efa58p@chrX:135338397..135338402, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589396..152589401,-#_a94794a00b78c9028f3bf3b1af3efa58p68@SYNE1
5.42e-195FFCP PHASE1:Hg19::chr6:152792957..152792960,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:152792957..152792960, -
5.42e-195FFCP PHASE1:Hg19::chr2:188420455..188420469,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr2:188420455..188420469, +
5.42e-195FFCP PHASE1:Hg19::chr17:46178195..46178202,-#_a94794a00b78c9028f3bf3b1af3efa58p12@CBX1
5.42e-195FFCP PHASE2:Hg19::chr11:30253410..30253431,+#_a94794a00b78c9028f3bf3b1af3efa58p2@FSHB
5.42e-195FFCP PHASE1:Hg19::chr12:70351934..70351939,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:70351934..70351939, +
5.42e-195FFCP PHASE2:Hg19::chr18:74535969..74535980,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr18:74535969..74535980, -
5.42e-195FFCP PHASE2:Hg19::chr8:107074411..107074421,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr8:107074411..107074421, +
5.42e-195FFCP PHASE2:Hg19::chr12:71031372..71031377,-#_a94794a00b78c9028f3bf3b1af3efa58p25@PTPRB
5.42e-195FFCP PHASE2:Hg19::chr2:175614951..175614956,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr2:175614951..175614956, -
5.42e-195FFCP PHASE2:Hg19::chr12:108955070..108955084,-#_a94794a00b78c9028f3bf3b1af3efa58p16@SART3
5.42e-195FFCP PHASE2:Hg19::chr3:1577559..1577577,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr3:1577559..1577577, -
5.42e-195FFCP PHASE1:Hg19::chr6:152590052..152590068,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr6:152590052..152590068, -
5.42e-195FFCP PHASE2:Hg19::chr13:23027835..23027846,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr13:23027835..23027846, +
5.42e-195FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr2:206927691..206927699, -
5.42e-195FFCP PHASE1:Hg19::chr12:46884845..46884851,+#_a94794a00b78c9028f3bf3b1af3efa58p@chr12:46884845..46884851, +
5.42e-195FFCP PHASE2:Hg19::chr18:22251681..22251685,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr18:22251681..22251685, -
5.42e-195FFCP PHASE2:Hg19::chr15:96181408..96181419,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr15:96181408..96181419, -
5.42e-195FFCP PHASE2:Hg19::chr5:39548606..39548614,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr5:39548606..39548614, -
5.42e-195FFCP PHASE1:Hg19::chr6:109702786..109702795,-#_a94794a00b78c9028f3bf3b1af3efa58p21@CD164
5.42e-195FFCP PHASE1:Hg19::chr4:169935453..169935460,-#_a94794a00b78c9028f3bf3b1af3efa58p@chr4:169935453..169935460, -
5.42e-195FFCP PHASE2:Hg19::chrX:591202..591211,-#_a94794a00b78c9028f3bf3b1af3efa58p@chrX:591202..591211, -

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