UBERON:0002419: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:MA_0000146-FMA_71878 | ||
|comment=check FMA, use plural for now as general class not there | |comment=check FMA, use plural for now as general class not there | ||
|created_by= | |created_by= | ||
| | |def="A gland that is part of a skin of body [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0002419 | |||
|is_a=UBERON:0003297 ;;UBERON:0004121 ;;UBERON:0006003 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=skin gland | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002097 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=organ_slim | ||
| | |synonym="glandulae cutis" EXACT [FMA:71878, FMA:TA];;"skin glands" RELATED PLURAL [];;"skin glands set" RELATED PLURAL [] | ||
|union_of= | |||
|xref=FMA:71878;;MA:0000146 | |||
}} | }} | ||
Latest revision as of 17:31, 12 September 2014
| Name: | skin gland | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A gland that is part of a skin of body [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"glandulae cutis" EXACT [FMA:71878, FMA:TA] "skin glands" RELATED PLURAL [] "skin glands set" RELATED PLURAL [] | ||
| Comments: | check FMA, use plural for now as general class not there | ||
| Alt_id: | UBERON:MA_0000146-FMA_71878 | ||
| Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003297(gland of integumental system),UBERON:0004121(ectoderm-derived structure),UBERON:0006003(integumentary adnexa) |
|---|---|
| part_of: | UBERON:0002097(skin of body) |
Children
| is a: | UBERON:0007771 (epidermis gland),FF:0011175 (Skin - armpit sweat gland rich) |
|---|---|
| part of: | CL:0002308 (epithelial cell of skin gland) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10284-104F5
- 10312-104I6
- 10340-105C7
- 11220-116B5 (Sebocyte, donor1)
- 11301-117B5 (Sebocyte, donor2)
- 11378-118B1 (Sebocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002419 (skin gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_b8fe2ca2b1d552701c1dab6808961c21 | p2@PGLYRP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_b8fe2ca2b1d552701c1dab6808961c21 | p2@PGLYRP4 |
| 2.56e-98 | FFCP PHASE2:Hg19::chrY:7671916..7671924,-#_26e69569d5b327460b45333c3437a6e6 | p@chrY:7671916..7671924, - |
| 2.56e-98 | FFCP PHASE1:Hg19::chrY:7671916..7671924,-#_26e69569d5b327460b45333c3437a6e6 | p@chrY:7671916..7671924, - |
| 3.49e-79 | FFCP PHASE1:Hg19::chr17:19702846..19702866,-#_48c6775110e7ad30989a54aff14c5e11 | p@chr17:19702846..19702866, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr17:19702846..19702866,-#_48c6775110e7ad30989a54aff14c5e11 | p@chr17:19702846..19702866, - |
| 5.22e-79 | FFCP PHASE2:Hg19::chr1:207038965..207038969,+#_fe7a1ca962aadbc269a352538379927c | p1@IL20 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr1:207038965..207038969,+#_fe7a1ca962aadbc269a352538379927c | p1@IL20 |
| 5.53e-66 | FFCP PHASE2:Hg19::chr6:12577789..12577820,-#_7d713a3c4a30306273b8d8cfd391303a | p@chr6:12577789..12577820, - |
| 5.53e-66 | FFCP PHASE1:Hg19::chr6:12577789..12577820,-#_7d713a3c4a30306273b8d8cfd391303a | p@chr6:12577789..12577820, - |
| 4.77e-57 | FFCP PHASE1:Hg19::chr10:118187325..118187332,+#_c778e407c81ad1f59f25c1b7f2602940 | p5@PNLIPRP3 |
| 4.77e-57 | FFCP PHASE2:Hg19::chr10:118187325..118187332,+#_c778e407c81ad1f59f25c1b7f2602940 | p5@PNLIPRP3 |
| 1.13e-56 | FFCP PHASE2:Hg19::chr9:27524485..27524505,+#_efbe1c324f5c92f000fc461f067912d9 | p2@IFNK |
| 1.13e-56 | FFCP PHASE1:Hg19::chr9:27524485..27524505,+#_efbe1c324f5c92f000fc461f067912d9 | p2@IFNK |
| 4.0e-50 | FFCP PHASE2:Hg19::chr8:22844791..22844808,+#_695ae8047fbedc41d50d3a0ce10aaa07 | p16@RHOBTB2 |
| 4.0e-50 | FFCP PHASE1:Hg19::chr8:22844791..22844808,+#_695ae8047fbedc41d50d3a0ce10aaa07 | p16@RHOBTB2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr12:122430653..122430662,+#_53356d5e1e3dda925bca074b7048d663 | p@chr12:122430653..122430662, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr15:42566576..42566581,+#_53356d5e1e3dda925bca074b7048d663 | p18@GANC |
| 4.52e-50 | FFCP PHASE1:Hg19::chr15:42566576..42566581,+#_53356d5e1e3dda925bca074b7048d663 | p18@GANC |
| 4.52e-50 | FFCP PHASE2:Hg19::chr5:150951045..150951053,-#_53356d5e1e3dda925bca074b7048d663 | p@chr5:150951045..150951053, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr12:122430653..122430662,+#_53356d5e1e3dda925bca074b7048d663 | p@chr12:122430653..122430662, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr5:150951045..150951053,-#_53356d5e1e3dda925bca074b7048d663 | p@chr5:150951045..150951053, - |
| 5.15e-50 | FFCP PHASE2:Hg19::chr2:238933920..238933935,+#_f6b1e107a37742a4a55eab884eb6ca13 | p7@UBE2F |
| 5.15e-50 | FFCP PHASE1:Hg19::chr2:238933920..238933935,+#_f6b1e107a37742a4a55eab884eb6ca13 | p7@UBE2F |
| 1.09e-49 | FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_982512916feb46cb738b1e8f3d055a41 | p@chr7:121156367..121156370, - |
| 1.09e-49 | FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_982512916feb46cb738b1e8f3d055a41 | p@chr7:121156367..121156370, - |
| 3.19e-45 | FFCP PHASE2:Hg19::chr18:9538358..9538360,+#_7bcacff0a61ce7869516f8913a154d79 | p@chr18:9538358..9538360, + |
| 3.19e-45 | FFCP PHASE1:Hg19::chr18:9538358..9538360,+#_7bcacff0a61ce7869516f8913a154d79 | p@chr18:9538358..9538360, + |
| 9.79e-45 | FFCP PHASE1:Hg19::chr9:117972180..117972191,+#_920a703cb7944294d90eeefa43f00964 | p@chr9:117972180..117972191, + |
| 9.79e-45 | FFCP PHASE2:Hg19::chr9:117972180..117972191,+#_920a703cb7944294d90eeefa43f00964 | p@chr9:117972180..117972191, + |
| 1.91e-44 | FFCP PHASE1:Hg19::chr10:47740297..47740299,+#_8593d985094c35a52527d89cfa96f086 | p1@FAM25HP |
| 1.91e-44 | FFCP PHASE2:Hg19::chr10:47740297..47740299,+#_8593d985094c35a52527d89cfa96f086 | p1@FAM25HP |
| 1.34e-40 | FFCP PHASE1:Hg19::chr3:189654013..189654016,-#_39dcd2309c7bf96c542ba30f9204fe94 | p@chr3:189654013..189654016, - |
| 1.34e-40 | FFCP PHASE2:Hg19::chr7:97984729..97984742,-#_39dcd2309c7bf96c542ba30f9204fe94 | p14@BAIAP2L1 |
| 1.34e-40 | FFCP PHASE1:Hg19::chr7:97984729..97984742,-#_39dcd2309c7bf96c542ba30f9204fe94 | p14@BAIAP2L1 |
| 1.34e-40 | FFCP PHASE2:Hg19::chr3:189654013..189654016,-#_39dcd2309c7bf96c542ba30f9204fe94 | p@chr3:189654013..189654016, - |
| 2.01e-40 | FFCP PHASE1:Hg19::chr17:38652332..38652344,-#_f02426d6d8657f8f1164c3445475a070 | p18@TNS4 |
| 2.01e-40 | FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_f02426d6d8657f8f1164c3445475a070 | p@chr2:131669803..131669810, + |
| 2.01e-40 | FFCP PHASE2:Hg19::chr17:38652332..38652344,-#_f02426d6d8657f8f1164c3445475a070 | p18@TNS4 |
| 2.01e-40 | FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_f02426d6d8657f8f1164c3445475a070 | p@chr2:131669803..131669810, + |
| 2.46e-40 | FFCP PHASE1:Hg19::chr9:27524537..27524559,+#_ab23a1b6fbe5ea3211a1e4ca02636313 | p1@IFNK |
| 2.46e-40 | FFCP PHASE2:Hg19::chr9:27524537..27524559,+#_ab23a1b6fbe5ea3211a1e4ca02636313 | p1@IFNK |
| 5.49e-40 | FFCP PHASE2:Hg19::chr5:134906500..134906526,+#_eb60d5533ad19159a8e6eb4b256e8df1 | p@chr5:134906500..134906526, + |
| 5.49e-40 | FFCP PHASE1:Hg19::chr5:134906500..134906526,+#_eb60d5533ad19159a8e6eb4b256e8df1 | p@chr5:134906500..134906526, + |
| 1.89e-37 | FFCP PHASE2:Hg19::chr5:167247103..167247112,+#_bf050167ab614db880279542a1690aa1 | p@chr5:167247103..167247112, + |
| 1.89e-37 | FFCP PHASE1:Hg19::chr5:167247103..167247112,+#_bf050167ab614db880279542a1690aa1 | p@chr5:167247103..167247112, + |
| 4.73e-37 | FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_4010da873e17f09c7262acca260d8850 | p@chr5:52619638..52619641, + |
| 4.73e-37 | FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_4010da873e17f09c7262acca260d8850 | p@chr5:52619638..52619641, + |
| 1.18e-36 | FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_35b7086d9cf972315e2a77fd2ac6bda6 | p7@LYPD5 |
| 1.18e-36 | FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_35b7086d9cf972315e2a77fd2ac6bda6 | p7@LYPD5 |
| 1.42e-36 | FFCP PHASE2:Hg19::chr14:51955760..51955769,+#_3edd7385fc22c6050f875d17721dfcfb | p29@FRMD6 |
| 1.42e-36 | FFCP PHASE1:Hg19::chr14:51955760..51955769,+#_3edd7385fc22c6050f875d17721dfcfb | p29@FRMD6 |
| 1.7e-36 | FFCP PHASE2:Hg19::chr2:213770576..213770587,+#_fed88055f3be065719432be616e3a8fb | p@chr2:213770576..213770587, + |
| 1.7e-36 | FFCP PHASE1:Hg19::chr2:213770576..213770587,+#_fed88055f3be065719432be616e3a8fb | p@chr2:213770576..213770587, + |
| 2.04e-36 | FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_771be67f68ddc24539e87174e2bf32f1 | p@chr13:30259768..30259777, + |
| 2.04e-36 | FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_771be67f68ddc24539e87174e2bf32f1 | p@chr13:30259768..30259777, + |
| 2.45e-36 | FFCP PHASE2:Hg19::chr2:62257232..62257274,+#_544495e5e185b28b5d6faa744cc1d821 | p@chr2:62257232..62257274, + |
| 2.45e-36 | FFCP PHASE1:Hg19::chr2:62257232..62257274,+#_544495e5e185b28b5d6faa744cc1d821 | p@chr2:62257232..62257274, + |
| 3.61e-34 | FFCP PHASE2:Hg19::chr5:93905715..93905716,+#_57b9f00bd8b9eda676fffbb6bbfa9527 | p2@uc003kkq.1 |
| 3.61e-34 | FFCP PHASE1:Hg19::chr5:93905715..93905716,+#_57b9f00bd8b9eda676fffbb6bbfa9527 | p2@uc003kkq.1 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr16:57954541..57954548,-#_fedaccc120a9c21a5ce4c5eaa141243d | p@chr16:57954541..57954548, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:64400723..64400730,-#_fedaccc120a9c21a5ce4c5eaa141243d | p@chr5:64400723..64400730, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr16:57954541..57954548,-#_fedaccc120a9c21a5ce4c5eaa141243d | p@chr16:57954541..57954548, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:64400723..64400730,-#_fedaccc120a9c21a5ce4c5eaa141243d | p@chr5:64400723..64400730, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:87770064..87770069,-#_9f4f3f6e7648cd5085081cad08b737e4 | p13@SLC10A6 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:87770064..87770069,-#_9f4f3f6e7648cd5085081cad08b737e4 | p13@SLC10A6 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:44963669..44963674,+#_9f4f3f6e7648cd5085081cad08b737e4 | p@chr4:44963669..44963674, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:44963669..44963674,+#_9f4f3f6e7648cd5085081cad08b737e4 | p@chr4:44963669..44963674, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:17719182..17719193,-#_9f4f3f6e7648cd5085081cad08b737e4 | p@chr7:17719182..17719193, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr19:1611369..1611372,-#_9f4f3f6e7648cd5085081cad08b737e4 | p13@TCF3 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:17719182..17719193,-#_9f4f3f6e7648cd5085081cad08b737e4 | p@chr7:17719182..17719193, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr19:1611369..1611372,-#_9f4f3f6e7648cd5085081cad08b737e4 | p13@TCF3 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr12:28125953..28125964,-#_058fbf94f4dca1c93f05e4e50a7d09d3 | p17@PTHLH |
| 1.17e-33 | FFCP PHASE2:Hg19::chr12:28125953..28125964,-#_058fbf94f4dca1c93f05e4e50a7d09d3 | p17@PTHLH |
| 1.39e-33 | FFCP PHASE1:Hg19::chr16:69145093..69145094,+#_497973f232953afe36cf59ee6f9be13e | p@chr16:69145093..69145094, + |
| 1.39e-33 | FFCP PHASE2:Hg19::chr16:69145093..69145094,+#_497973f232953afe36cf59ee6f9be13e | p@chr16:69145093..69145094, + |
| 2.29e-33 | FFCP PHASE1:Hg19::chr11:128812910..128812927,-#_3ee3200a8c0e264a338ffc4d66bd46d9 | p2@TP53AIP1 |
| 2.29e-33 | FFCP PHASE2:Hg19::chr11:128812910..128812927,-#_3ee3200a8c0e264a338ffc4d66bd46d9 | p2@TP53AIP1 |
| 7.33e-32 | FFCP PHASE1:Hg19::chr17:38120375..38120394,+#_dcf9636aab861cb3ad0079c06bfadc14 | p@chr17:38120375..38120394, + |
| 7.33e-32 | FFCP PHASE2:Hg19::chr17:38120375..38120394,+#_dcf9636aab861cb3ad0079c06bfadc14 | p@chr17:38120375..38120394, + |
| 1.87e-31 | FFCP PHASE2:Hg19::chr17:60782123..60782133,+#_20bf23023c2ecea12850520702b8cb51 | p@chr17:60782123..60782133, + |
| 1.87e-31 | FFCP PHASE1:Hg19::chr17:60782123..60782133,+#_20bf23023c2ecea12850520702b8cb51 | p@chr17:60782123..60782133, + |
| 4.04e-31 | FFCP PHASE1:Hg19::chr11:72295793..72295812,-#_1114e8c816fc15a075e34a9af70bf20c | p9@PDE2A |
| 4.04e-31 | FFCP PHASE2:Hg19::chr11:72295793..72295812,-#_1114e8c816fc15a075e34a9af70bf20c | p9@PDE2A |
| 2.22e-29 | FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_972133208daa31ed3f06a36bdce4900f | p@chr21:44957855..44957891, - |
| 2.22e-29 | FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_972133208daa31ed3f06a36bdce4900f | p@chr21:44957855..44957891, - |
| 2.56e-29 | FFCP PHASE2:Hg19::chr17:80037380..80037391,-#_57a3cafdd87dbede723ac7ead78c782d | p6@BC065179 |
| 2.56e-29 | FFCP PHASE1:Hg19::chr17:80037380..80037391,-#_57a3cafdd87dbede723ac7ead78c782d | p6@BC065179 |
| 3.41e-29 | FFCP PHASE2:Hg19::chr5:167247213..167247223,+#_fc872d4b97a4548838f0bd6810923660 | p@chr5:167247213..167247223, + |
| 3.41e-29 | FFCP PHASE1:Hg19::chr5:167247213..167247223,+#_fc872d4b97a4548838f0bd6810923660 | p@chr5:167247213..167247223, + |
| 6.06e-29 | FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_0e4b16594dfee525ae107ce4388143d1 | p2@HEPHL1 |
| 6.06e-29 | FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_0e4b16594dfee525ae107ce4388143d1 | p2@HEPHL1 |
| 8.13e-28 | FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_4184241a267b8db289171faef1d1e44f | p@chr7:40883521..40883532, + |
| 8.13e-28 | FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_4184241a267b8db289171faef1d1e44f | p@chr7:40883521..40883532, + |
| 1.22e-27 | FFCP PHASE2:Hg19::chr5:111445067..111445085,-#_10fb1204b00f8ecd4351c7b97fb7ca7c | p@chr5:111445067..111445085, - |
| 1.22e-27 | FFCP PHASE1:Hg19::chr5:111445067..111445085,-#_10fb1204b00f8ecd4351c7b97fb7ca7c | p@chr5:111445067..111445085, - |
| 1.6e-27 | FFCP PHASE2:Hg19::chr7:157086249..157086269,-#_5e3cffb6bb74aad9810588941dbcb725 | p@chr7:157086249..157086269, - |
| 1.6e-27 | FFCP PHASE1:Hg19::chr7:157086249..157086269,-#_5e3cffb6bb74aad9810588941dbcb725 | p@chr7:157086249..157086269, - |
| 1.6e-27 | FFCP PHASE2:Hg19::chr1:209601525..209601530,+#_5e3cffb6bb74aad9810588941dbcb725 | p@chr1:209601525..209601530, + |
| 1.6e-27 | FFCP PHASE1:Hg19::chr1:209601525..209601530,+#_5e3cffb6bb74aad9810588941dbcb725 | p@chr1:209601525..209601530, + |
