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{{CL
{{CL
|id=CL:0000077
|alt_id=
|name=mesothelial cell
|namespace=cell;;efo
|def="A flattened epithelial cell of mesenchymal origin that lines the serous cavity." [GOC:tfm, ISBN:0721662544]
|xref=FMA:66773
|is_a=CL:0000076;;CL:0000213
|synonym="mesotheliocyte" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A flattened epithelial cell of mesenchymal origin that lines the serous cavity." [GOC:tfm, ISBN:0721662544]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=CL:0000222
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000077
|is_a=CL:0000076 ;;CL:0000213
|is_obsolete=
|located_in=
|located_in=
|name=mesothelial cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="mesotheliocyte" EXACT []
|union_of=
|xref=FMA:66773
}}
}}

Latest revision as of 16:29, 12 September 2014

Name:mesothelial cell
Namespace:FANTOM
Definition:"A flattened epithelial cell of mesenchymal origin that lines the serous cavity." [GOC:tfm, ISBN:0721662544]
Xrefs:
links:
FMA:66773
Synonyms: "mesotheliocyte" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000076(squamous epithelial cell),CL:0000213(lining cell)
develops_from:CL:0000222(mesodermal cell)



Children


is a:CL:0002625 (seminiferous tubule epithelial cell)
derives from:FF:0000099 (human mesothelial cell sample),FF:0102424 (mesothelioma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000077 (mesothelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.97e-72FFCP PHASE1:Hg19::chr12:120502376..120502385,+#_74424a3bda9bf76a89fd4812cb91d630p8@CCDC64
1.97e-72FFCP PHASE2:Hg19::chr12:120502376..120502385,+#_74424a3bda9bf76a89fd4812cb91d630p8@CCDC64
1.92e-69FFCP PHASE2:Hg19::chr13:34727644..34727660,-#_ce0b82bb391d71bcf53648703f632c47p@chr13:34727644..34727660, -
1.92e-69FFCP PHASE1:Hg19::chr13:34727644..34727660,-#_ce0b82bb391d71bcf53648703f632c47p@chr13:34727644..34727660, -
2.23e-64FFCP PHASE2:Hg19::chr14:100003871..100003888,-#_e35083b97a50a4f00c6ff5e19f66cc81p@chr14:100003871..100003888, -
2.23e-64FFCP PHASE1:Hg19::chr14:100003871..100003888,-#_e35083b97a50a4f00c6ff5e19f66cc81p@chr14:100003871..100003888, -
9.09e-55FFCP PHASE2:Hg19::chr20:1612073..1612090,+#_64103e5534174516c159e00da12bc53bp@chr20:1612073..1612090, +
9.09e-55FFCP PHASE1:Hg19::chr20:1612073..1612090,+#_64103e5534174516c159e00da12bc53bp@chr20:1612073..1612090, +
6.83e-51FFCP PHASE2:Hg19::chr19:10687954..10687965,-#_994ba33e48eea05acff77f258f5a6b7cp@chr19:10687954..10687965, -
6.83e-51FFCP PHASE1:Hg19::chr19:10687954..10687965,-#_994ba33e48eea05acff77f258f5a6b7cp@chr19:10687954..10687965, -
1.71e-49FFCP PHASE2:Hg19::chr2:234451186..234451205,-#_e89626041f531e460c7e10b3d034e681p5@USP40
1.71e-49FFCP PHASE1:Hg19::chr2:234451186..234451205,-#_e89626041f531e460c7e10b3d034e681p5@USP40
6.45e-47FFCP PHASE2:Hg19::chr11:117150581..117150628,+#_ec17df339d2494ae111bd40fdcd35189p@chr11:117150581..117150628, +
6.45e-47FFCP PHASE1:Hg19::chr11:117150581..117150628,+#_ec17df339d2494ae111bd40fdcd35189p@chr11:117150581..117150628, +
8.87e-47FFCP PHASE2:Hg19::chrX:64898352..64898387,+#_b0794602e853f204460af25bc6bf2620p10@MSN
8.87e-47FFCP PHASE1:Hg19::chrX:64898352..64898387,+#_b0794602e853f204460af25bc6bf2620p10@MSN
7.54e-46FFCP PHASE2:Hg19::chr22:27622736..27622761,-#_624c2f33fc7be8a3c9eea99a9486057ep2@uc003adh.2
7.54e-46FFCP PHASE1:Hg19::chr22:27622736..27622761,-#_624c2f33fc7be8a3c9eea99a9486057ep2@uc003adh.2
4.57e-44FFCP PHASE2:Hg19::chr2:25326312..25326322,+#_6f67da0cb525b93ce885c42af1abe0dbp@chr2:25326312..25326322, +
4.57e-44FFCP PHASE1:Hg19::chr2:25326312..25326322,+#_6f67da0cb525b93ce885c42af1abe0dbp@chr2:25326312..25326322, +
3.83e-42FFCP PHASE2:Hg19::chr20:1435971..1435982,-#_77b23fc0d7f5de5f138f620b48e25239p@chr20:1435971..1435982, -
3.83e-42FFCP PHASE1:Hg19::chr20:1435971..1435982,-#_77b23fc0d7f5de5f138f620b48e25239p@chr20:1435971..1435982, -
3.83e-42FFCP PHASE2:Hg19::chr19:38902076..38902104,-#_77b23fc0d7f5de5f138f620b48e25239p@chr19:38902076..38902104, -
3.83e-42FFCP PHASE1:Hg19::chr19:38902076..38902104,-#_77b23fc0d7f5de5f138f620b48e25239p@chr19:38902076..38902104, -
8.89e-42FFCP PHASE2:Hg19::chrX:140048723..140048740,+#_77226ffc88fa0ec35274831bc68b3aacp@chrX:140048723..140048740, +
8.89e-42FFCP PHASE1:Hg19::chrX:140048723..140048740,+#_77226ffc88fa0ec35274831bc68b3aacp@chrX:140048723..140048740, +
9.54e-42FFCP PHASE2:Hg19::chr2:220309819..220309833,+#_3315da0d9a9169f1209a47e99e8ce000p26@SPEG
9.54e-42FFCP PHASE1:Hg19::chr2:220309819..220309833,+#_3315da0d9a9169f1209a47e99e8ce000p26@SPEG
2.76e-39FFCP PHASE2:Hg19::chr8:98900255..98900325,+#_25f6b67da87a47580d85b84e327dc7f7p2@MATN2
2.76e-39FFCP PHASE1:Hg19::chr8:98900255..98900325,+#_25f6b67da87a47580d85b84e327dc7f7p2@MATN2
4.43e-39FFCP PHASE2:Hg19::chr8:74498501..74498510,-#_b28e70d33c8bbdeaec48b5b0850bd1f7p@chr8:74498501..74498510, -
4.43e-39FFCP PHASE1:Hg19::chr8:74498501..74498510,-#_b28e70d33c8bbdeaec48b5b0850bd1f7p@chr8:74498501..74498510, -
1.4e-38FFCP PHASE2:Hg19::chr1:240926680..240926686,+#_325caaebcb5285bdfb886fe604da6bb0p@chr1:240926680..240926686, +
1.4e-38FFCP PHASE1:Hg19::chr1:240926680..240926686,+#_325caaebcb5285bdfb886fe604da6bb0p@chr1:240926680..240926686, +
1.71e-37FFCP PHASE2:Hg19::chr8:19171466..19171477,+#_abbda087072f70e6ed127b9690ab1abcp6@SH2D4A
1.71e-37FFCP PHASE1:Hg19::chr8:19171466..19171477,+#_abbda087072f70e6ed127b9690ab1abcp6@SH2D4A
4.07e-37FFCP PHASE2:Hg19::chr19:10688044..10688070,-#_13d450f11ab30e21820dfdb0ff15766ep@chr19:10688044..10688070, -
4.07e-37FFCP PHASE1:Hg19::chr19:10688044..10688070,-#_13d450f11ab30e21820dfdb0ff15766ep@chr19:10688044..10688070, -
1.9e-36FFCP PHASE2:Hg19::chr19:10688000..10688029,-#_26a0db458cf93b62c0646060b3f4bc47p@chr19:10688000..10688029, -
1.9e-36FFCP PHASE1:Hg19::chr19:10688000..10688029,-#_26a0db458cf93b62c0646060b3f4bc47p@chr19:10688000..10688029, -
2.59e-36FFCP PHASE1:Hg19::chr12:53344266..53344294,+#_4d252dab61ede7c16bc7a52db981dd70p10@KRT18
2.59e-36FFCP PHASE2:Hg19::chr12:53344266..53344294,+#_4d252dab61ede7c16bc7a52db981dd70p10@KRT18
4.12e-35FFCP PHASE2:Hg19::chr1:11919027..11919058,-#_256ee15f247fee981c2ddc862a2bfcbep2@NPPB
4.12e-35FFCP PHASE1:Hg19::chr1:11919027..11919058,-#_256ee15f247fee981c2ddc862a2bfcbep2@NPPB
1.27e-34FFCP PHASE2:Hg19::chr8:98900132..98900183,+#_d1d23154695137f4772b971c62b74725p3@MATN2
1.27e-34FFCP PHASE1:Hg19::chr8:98900132..98900183,+#_d1d23154695137f4772b971c62b74725p3@MATN2
1.62e-34FFCP PHASE2:Hg19::chr8:22418409..22418450,+#_253b2d0775b3eee3850cb7583ef9327ap42@SORBS3
1.62e-34FFCP PHASE1:Hg19::chr8:22418409..22418450,+#_253b2d0775b3eee3850cb7583ef9327ap42@SORBS3
2.85e-34FFCP PHASE2:Hg19::chr4:142141683..142141694,+#_40ba501245c6eb2b271bb397fc1a4370p3@ZNF330
2.85e-34FFCP PHASE1:Hg19::chr4:142141683..142141694,+#_40ba501245c6eb2b271bb397fc1a4370p3@ZNF330
3.81e-34FFCP PHASE2:Hg19::chr12:120502386..120502408,+#_b8f0f3f980e07841fed982261bdf0edcp1@CCDC64
3.81e-34FFCP PHASE1:Hg19::chr12:120502386..120502408,+#_b8f0f3f980e07841fed982261bdf0edcp1@CCDC64
5.69e-34FFCP PHASE2:Hg19::chr11:27882366..27882372,+#_365beca8bdb3836e81697c5d73580aa5p@chr11:27882366..27882372, +
5.69e-34FFCP PHASE1:Hg19::chr11:27882366..27882372,+#_365beca8bdb3836e81697c5d73580aa5p@chr11:27882366..27882372, +
7.04e-34FFCP PHASE1:Hg19::chr11:117150669..117150717,+#_80a6ae3003666169aaed1390c08737d1p@chr11:117150669..117150717, +
7.04e-34FFCP PHASE2:Hg19::chr2:170115546..170115580,-#_80a6ae3003666169aaed1390c08737d1p@chr2:170115546..170115580, -
7.04e-34FFCP PHASE1:Hg19::chr2:170115546..170115580,-#_80a6ae3003666169aaed1390c08737d1p@chr2:170115546..170115580, -
7.04e-34FFCP PHASE2:Hg19::chr11:117150669..117150717,+#_80a6ae3003666169aaed1390c08737d1p@chr11:117150669..117150717, +
7.04e-34FFCP PHASE2:Hg19::chr9:123128390..123128421,-#_80a6ae3003666169aaed1390c08737d1p@chr9:123128390..123128421, -
7.04e-34FFCP PHASE1:Hg19::chr9:123128390..123128421,-#_80a6ae3003666169aaed1390c08737d1p@chr9:123128390..123128421, -
7.67e-34FFCP PHASE2:Hg19::chr18:20419512..20419521,-#_4b82e82f4ab5d486d96b7b293f7cc304p@chr18:20419512..20419521, -
7.67e-34FFCP PHASE2:Hg19::chr7:129940193..129940197,+#_4b82e82f4ab5d486d96b7b293f7cc304p@chr7:129940193..129940197, +
7.67e-34FFCP PHASE1:Hg19::chr7:129940193..129940197,+#_4b82e82f4ab5d486d96b7b293f7cc304p@chr7:129940193..129940197, +
7.67e-34FFCP PHASE1:Hg19::chr18:20419512..20419521,-#_4b82e82f4ab5d486d96b7b293f7cc304p@chr18:20419512..20419521, -
7.67e-34FFCP PHASE2:Hg19::chr7:6285086..6285095,+#_4b82e82f4ab5d486d96b7b293f7cc304p@chr7:6285086..6285095, +
7.67e-34FFCP PHASE1:Hg19::chr7:6285086..6285095,+#_4b82e82f4ab5d486d96b7b293f7cc304p@chr7:6285086..6285095, +
7.67e-34FFCP PHASE2:Hg19::chr14:105952794..105952805,+#_4b82e82f4ab5d486d96b7b293f7cc304p18@CRIP1
7.67e-34FFCP PHASE1:Hg19::chr14:105952794..105952805,+#_4b82e82f4ab5d486d96b7b293f7cc304p18@CRIP1
9.88e-34FFCP PHASE2:Hg19::chr1:107067629..107067653,+#_ab65db15912a73b9005568589749c158p@chr1:107067629..107067653, +
9.88e-34FFCP PHASE1:Hg19::chr1:107067629..107067653,+#_ab65db15912a73b9005568589749c158p@chr1:107067629..107067653, +
1.27e-32FFCP PHASE1:Hg19::chr7:129963582..129963596,+#_04442aab254e0b0768640244e418128ep@chr7:129963582..129963596, +
1.27e-32FFCP PHASE2:Hg19::chr7:129963582..129963596,+#_04442aab254e0b0768640244e418128ep@chr7:129963582..129963596, +
4.52e-32FFCP PHASE1:Hg19::chr12:120502465..120502470,+#_0f1b53cccf6e8e7deb29002558ee2881p12@CCDC64
4.52e-32FFCP PHASE2:Hg19::chr12:120502465..120502470,+#_0f1b53cccf6e8e7deb29002558ee2881p12@CCDC64
4.52e-32FFCP PHASE1:Hg19::chr18:7813360..7813367,+#_0f1b53cccf6e8e7deb29002558ee2881p@chr18:7813360..7813367, +
4.52e-32FFCP PHASE2:Hg19::chr9:35027511..35027519,-#_0f1b53cccf6e8e7deb29002558ee2881p@chr9:35027511..35027519, -
4.52e-32FFCP PHASE1:Hg19::chr9:35027511..35027519,-#_0f1b53cccf6e8e7deb29002558ee2881p@chr9:35027511..35027519, -
4.52e-32FFCP PHASE2:Hg19::chr4:28801404..28801410,-#_0f1b53cccf6e8e7deb29002558ee2881p@chr4:28801404..28801410, -
4.52e-32FFCP PHASE1:Hg19::chr4:28801404..28801410,-#_0f1b53cccf6e8e7deb29002558ee2881p@chr4:28801404..28801410, -
4.52e-32FFCP PHASE1:Hg19::chr11:7506866..7506875,+#_0f1b53cccf6e8e7deb29002558ee2881p8@OLFML1
4.52e-32FFCP PHASE2:Hg19::chr11:7506866..7506875,+#_0f1b53cccf6e8e7deb29002558ee2881p8@OLFML1
4.52e-32FFCP PHASE2:Hg19::chr18:7813360..7813367,+#_0f1b53cccf6e8e7deb29002558ee2881p@chr18:7813360..7813367, +
4.52e-32FFCP PHASE2:Hg19::chr13:38083829..38083838,+#_0f1b53cccf6e8e7deb29002558ee2881p@chr13:38083829..38083838, +
4.52e-32FFCP PHASE1:Hg19::chr13:38083829..38083838,+#_0f1b53cccf6e8e7deb29002558ee2881p@chr13:38083829..38083838, +
1.1e-31FFCP PHASE2:Hg19::chr9:130285057..130285094,-#_f69844e20ffc4946b67a2819645e0fc6p@chr9:130285057..130285094, -
1.1e-31FFCP PHASE1:Hg19::chr9:130285057..130285094,-#_f69844e20ffc4946b67a2819645e0fc6p@chr9:130285057..130285094, -
1.14e-31FFCP PHASE2:Hg19::chr22:37892776..37892816,-#_d9730f94beb7d054be53c414d0358d02p4@CARD10
1.14e-31FFCP PHASE1:Hg19::chr22:37892776..37892816,-#_d9730f94beb7d054be53c414d0358d02p4@CARD10
2.08e-31FFCP PHASE1:Hg19::chr12:132863063..132863075,-#_97b71cec7e8ec77e8867795cd50eefdbp4@GALNT9
2.08e-31FFCP PHASE2:Hg19::chr12:132863063..132863075,-#_97b71cec7e8ec77e8867795cd50eefdbp4@GALNT9
6.45e-31FFCP PHASE2:Hg19::chrX:8472470..8472482,-#_da191c96e0bb891d7f7c6f4e90b1b796p@chrX:8472470..8472482, -
6.45e-31FFCP PHASE1:Hg19::chrX:8472470..8472482,-#_da191c96e0bb891d7f7c6f4e90b1b796p@chrX:8472470..8472482, -
9.91e-31FFCP PHASE2:Hg19::chr19:10687983..10687998,-#_af463be426b049590385566c79554638p@chr19:10687983..10687998, -
9.91e-31FFCP PHASE1:Hg19::chr19:10687983..10687998,-#_af463be426b049590385566c79554638p@chr19:10687983..10687998, -
1.67e-30FFCP PHASE2:Hg19::chr1:248020627..248020645,+#_c72b59f99b1456e3790374aa6dec2a99p4@TRIM58
1.67e-30FFCP PHASE1:Hg19::chr1:248020627..248020645,+#_c72b59f99b1456e3790374aa6dec2a99p4@TRIM58
2.2e-30FFCP PHASE1:Hg19::chr12:132863007..132863039,-#_4b1c987a6c3ce505732ce4b0e4460973p2@GALNT9
2.2e-30FFCP PHASE2:Hg19::chr12:132863007..132863039,-#_4b1c987a6c3ce505732ce4b0e4460973p2@GALNT9
2.8e-30FFCP PHASE2:Hg19::chr22:27622699..27622733,-#_6a1979568d3ce35653aef637c487b292p1@uc003adh.2
2.8e-30FFCP PHASE1:Hg19::chr22:27622699..27622733,-#_6a1979568d3ce35653aef637c487b292p1@uc003adh.2

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