Personal tools

CL:0000514: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000514
|alt_id=
|name=smooth muscle myoblast
|namespace=cell;;efo
|def="A precursor cell destined to differentiate into smooth muscle myocytes." [GOC:tfm, MESH:A.11.635.510, MESH:D032390]
|xref=FMA:84798
|is_a=CL:0000056;;CL:0000187
|synonym="myoblast, smooth muscle" EXACT [MESH:D032390];;"satellite cell" RELATED []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A precursor cell destined to differentiate into smooth muscle myocytes." [GOC:tfm, MESH:A.11.635.510, MESH:D032390]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000514
|is_a=CL:0000056
|is_obsolete=
|located_in=
|located_in=
|name=smooth muscle myoblast
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="myoblast, smooth muscle" EXACT [MESH:D032390];;"satellite cell" RELATED []
|union_of=
|xref=FMA:84798
}}
}}

Latest revision as of 16:34, 12 September 2014

Name:smooth muscle myoblast
Namespace:FANTOM
Definition:"A precursor cell destined to differentiate into smooth muscle myocytes." [GOC:tfm, MESH:A.11.635.510, MESH:D032390]
Xrefs:
links:
FMA:84798
Synonyms: "myoblast, smooth muscle" EXACT [MESH:D032390]
"satellite cell" RELATED []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000056(myoblast)



Children


develops from:CL:0000192 (smooth muscle cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000514 (smooth muscle myoblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_46507ff929e7c1371590e90700ee6871p@chr2:178190171..178190178, +
1.58e-86FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_46507ff929e7c1371590e90700ee6871p@chr2:178190171..178190178, +
1.58e-86FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_46507ff929e7c1371590e90700ee6871p@chrX:160839744..160839754, +
1.58e-86FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_46507ff929e7c1371590e90700ee6871p@chr2:112043522..112043530, -
1.58e-86FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_46507ff929e7c1371590e90700ee6871p@chr8:69228447..69228492, +
1.58e-86FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_46507ff929e7c1371590e90700ee6871p@chr8:69228447..69228492, +
1.58e-86FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_46507ff929e7c1371590e90700ee6871p5@Adamts2
1.58e-86FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_46507ff929e7c1371590e90700ee6871p@chrX:160839744..160839754, +
1.58e-86FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_46507ff929e7c1371590e90700ee6871p@chr17:14827154..14827169, -
1.58e-86FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_46507ff929e7c1371590e90700ee6871p@chr17:87574327..87574332, +
1.58e-86FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_46507ff929e7c1371590e90700ee6871p@chr17:14827154..14827169, -
1.58e-86FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_46507ff929e7c1371590e90700ee6871p@chr17:14802633..14802637, -
1.58e-86FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_46507ff929e7c1371590e90700ee6871p@chr17:14802633..14802637, -
1.58e-86FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_46507ff929e7c1371590e90700ee6871p@chr17:87574327..87574332, +
1.58e-86FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_46507ff929e7c1371590e90700ee6871p5@Adamts2
1.58e-86FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_46507ff929e7c1371590e90700ee6871p@chr2:112043522..112043530, -
9.37e-70FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_e4d4f689504ef649d92549611bb3fa5dp@chr6:53359400..53359406, +
9.37e-70FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_e4d4f689504ef649d92549611bb3fa5dp@chr6:53359400..53359406, +
1.33e-65FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_d479490ce5773e44a97b6730c9516766p6@Npy1r
1.33e-65FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_d479490ce5773e44a97b6730c9516766p6@Npy1r
1.33e-65FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_d479490ce5773e44a97b6730c9516766p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_d479490ce5773e44a97b6730c9516766p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_d479490ce5773e44a97b6730c9516766p5@Myl12b
1.33e-65FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_d479490ce5773e44a97b6730c9516766p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_d479490ce5773e44a97b6730c9516766p5@Myl12b
1.33e-65FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_d479490ce5773e44a97b6730c9516766p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_d479490ce5773e44a97b6730c9516766p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_d479490ce5773e44a97b6730c9516766p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_d479490ce5773e44a97b6730c9516766p@chr11:118164535..118164544, -
1.33e-65FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_d479490ce5773e44a97b6730c9516766p@chr11:118164535..118164544, -
2.21e-65FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_bb6b6b487b29644bf35caeadb8b9b0cbp1@ENSMUST00000150529
2.21e-65FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_bb6b6b487b29644bf35caeadb8b9b0cbp1@ENSMUST00000150529
3.28e-58FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_5de596618ccb5a16792deea087160138p@chrX:160811352..160811356, -
3.28e-58FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_5de596618ccb5a16792deea087160138p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_5de596618ccb5a16792deea087160138p8@Vit
3.28e-58FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_5de596618ccb5a16792deea087160138p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_5de596618ccb5a16792deea087160138p@chr17:14817013..14817022, -
3.28e-58FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_5de596618ccb5a16792deea087160138p@chr10:33816181..33816195, -
3.28e-58FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_5de596618ccb5a16792deea087160138p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_5de596618ccb5a16792deea087160138p@chr17:14817013..14817022, -
3.28e-58FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_5de596618ccb5a16792deea087160138p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_5de596618ccb5a16792deea087160138p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_5de596618ccb5a16792deea087160138p12@Gpr39
3.28e-58FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_5de596618ccb5a16792deea087160138p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_5de596618ccb5a16792deea087160138p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_5de596618ccb5a16792deea087160138p@chrX:160811352..160811356, -
3.28e-58FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_5de596618ccb5a16792deea087160138p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_5de596618ccb5a16792deea087160138p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_5de596618ccb5a16792deea087160138p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_5de596618ccb5a16792deea087160138p12@Gpr39
3.28e-58FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_5de596618ccb5a16792deea087160138p8@Vit
3.28e-58FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_5de596618ccb5a16792deea087160138p@chr10:33816181..33816195, -
4.9e-53FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_f556bb83e92d7109868db018ec3848fep@chr10:67821185..67821217, -
4.9e-53FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_f556bb83e92d7109868db018ec3848fep@chr2:113589030..113589077, -
4.9e-53FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_f556bb83e92d7109868db018ec3848fep@chr2:113589030..113589077, -
4.9e-53FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f556bb83e92d7109868db018ec3848fep@chr7:91081998..91082010, -
4.9e-53FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_f556bb83e92d7109868db018ec3848fep@chr10:67821185..67821217, -
4.9e-53FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f556bb83e92d7109868db018ec3848fep@chr7:91081998..91082010, -
4.9e-53FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_f556bb83e92d7109868db018ec3848fep@chr17:29227828..29227839, -
4.9e-53FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_f556bb83e92d7109868db018ec3848fep@chr14:24251717..24251731, +
4.9e-53FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_f556bb83e92d7109868db018ec3848fep4@Il6st
4.9e-53FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_f556bb83e92d7109868db018ec3848fep@chr14:24251717..24251731, +
4.9e-53FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_f556bb83e92d7109868db018ec3848fep@chr17:29227828..29227839, -
4.9e-53FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_f556bb83e92d7109868db018ec3848fep@chr10:67598037..67598049, -
4.9e-53FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_f556bb83e92d7109868db018ec3848fep@chr10:67598037..67598049, -
4.9e-53FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_f556bb83e92d7109868db018ec3848fep5@Npy1r
4.9e-53FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_f556bb83e92d7109868db018ec3848fep5@Npy1r
4.9e-53FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_f556bb83e92d7109868db018ec3848fep4@Il6st
6.91e-53FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_3824e1238f851abf221b552ff40e8f86p@chr11:102661517..102661541, -
6.91e-53FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_3824e1238f851abf221b552ff40e8f86p@chr11:102661517..102661541, -
7.35e-53FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_748a6c7bab038c9f069614198897049fp11@Svep1
7.35e-53FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_748a6c7bab038c9f069614198897049fp11@Svep1
1.1e-52FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_f2d07319317326db82c7890c11656dbbp@chrX:160838787..160838800, +
1.1e-52FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_f2d07319317326db82c7890c11656dbbp@chrX:160838787..160838800, +
1.65e-52FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_9318602e97949d3e2b9e6b0b449220d3p5@Phlda3
1.65e-52FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_9318602e97949d3e2b9e6b0b449220d3p5@Phlda3
2.52e-52FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_87abee61d050f6a90c3c75ea9dfb3d9dp@chr4:74703497..74703511, +
2.52e-52FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_87abee61d050f6a90c3c75ea9dfb3d9dp@chr4:74703497..74703511, +
5.51e-52FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_c820357a4418f874627439002dc3117dp@chr2:65009852..65009866, -
5.51e-52FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_c820357a4418f874627439002dc3117dp@chr2:65009852..65009866, -
5.68e-52FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_fdce95db84a44303accbd6bea92ecef8p@chr4:7846444..7846449, -
5.68e-52FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_fdce95db84a44303accbd6bea92ecef8p@chr4:7846444..7846449, -
2.41e-47FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_2bcdb2f101df6aaf4648c826fb73675fp@chr2:134548872..134548879, -
2.41e-47FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_2bcdb2f101df6aaf4648c826fb73675fp@chr2:134548872..134548879, -
2.91e-46FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_472918432923851317dceef3350076e0p@chr4:74703963..74703975, +
2.91e-46FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_472918432923851317dceef3350076e0p@chr4:74703963..74703975, +
1.18e-44FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_8d6c74956b7cba003f8159b17471c33cp10@Gpr39
1.18e-44FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_8d6c74956b7cba003f8159b17471c33cp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_8d6c74956b7cba003f8159b17471c33cp@chrX:160838683..160838694, +
1.18e-44FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_8d6c74956b7cba003f8159b17471c33cp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_8d6c74956b7cba003f8159b17471c33cp10@Gpr39
1.18e-44FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_8d6c74956b7cba003f8159b17471c33cp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_8d6c74956b7cba003f8159b17471c33cp@chrX:160838683..160838694, +
1.18e-44FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_8d6c74956b7cba003f8159b17471c33cp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_8d6c74956b7cba003f8159b17471c33cp@chr2:178190136..178190151, +
1.18e-44FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_8d6c74956b7cba003f8159b17471c33cp@chr17:14813242..14813246, -
1.18e-44FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_8d6c74956b7cba003f8159b17471c33cp@chr2:178190136..178190151, +
1.18e-44FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_8d6c74956b7cba003f8159b17471c33cp@chr17:14813242..14813246, -
1.66e-44FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_5cc136783a7cd05c55d8261a8378ae74p@chrX:160839663..160839673, +
1.66e-44FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_5cc136783a7cd05c55d8261a8378ae74p9@Fgf10

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000514&oldid=3275291"