FFCP PHASE1:Hg19::chr1:107823239..107823243,+: Difference between revisions
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|id=chr1:107823239..107823243,+
|short_description=p@chr1:107823239..107823243,+
|description=CAGE_peak_at_chr1:107823239..107823243,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:107823239..107823243,+ | |||
|description=CAGE_peak_at_chr1:107823239..107823243,+ | |||
|id=chr1:107823239..107823243,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.10e-07!9;CL:0000594!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.13e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;7.01e-08;5 | |||
|ontology_enrichment_disease=DOID:171!3.82e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:154;1.07e-17;2!DOID:4236;1.07e-17;2!DOID:171;2.66e-14;10!DOID:3095;4.94e-07;22!DOID:2994;4.94e-07;22!DOID:169;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.07e-18,2;DOID:4236,9.07e-18,2;DOID:171,2.66e-14,10;DOID:3095,4.94e-07,22;DOID:2994,4.94e-07,22;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000010!3.79e-08!8;UBERON:0000013!7.25e-07!5;UBERON:0002410!7.25e-07!5;UBERON:0006331!9.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.12e-09;4!UBERON:0000923;1.12e-09;4!UBERON:0010316;1.12e-09;4!UBERON:0005291;1.12e-09;4!UBERON:0002050;5.35e-08;5!UBERON:0005423;5.35e-08;5!UBERON:0000013;6.13e-08;5!UBERON:0002410;6.13e-08;5!UBERON:0002046;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.13e-08,5;UBERON:0002410,6.13e-08,5;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5 | |||
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| ||
|short_description=p@chr1:107823239..107823243,+ | |||
}} | }} |
Latest revision as of 19:10, 27 July 2015
Short description: | p@chr1:107823239..107823243, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:107823239..107823243, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.13e-08 | 5 |
autonomic nervous system | 6.13e-08 | 5 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.07e-18 | 2 |
carcinosarcoma | 9.07e-18 | 2 |
neuroectodermal tumor | 2.66e-14 | 10 |
germ cell and embryonal cancer | 4.94e-07 | 22 |
germ cell cancer | 4.94e-07 | 22 |
neuroendocrine tumor | 8.02e-07 | 6 |