FFCP PHASE1:Hg19::chr19:56091526..56091565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56091526..56091565,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr19:56091526..56091565,- | |description=CAGE_peak_at_chr19:56091526..56091565,- | ||
|id=chr19:56091526..56091565,- | |id=chr19:56091526..56091565,- | ||
|ontology_enrichment_celltype=CL:1000507;1.26e-09;10!CL:1000494;1.26e-09;10!CL:1000449;9.10e-09;15!CL:1000497;2.08e-07;17!CL:0002518;2.08e-07;17 | |ontology_enrichment_celltype=CL:0000055!1.54e-13!180;CL:0000057!1.95e-07!75 | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;1.26e-09;10!CL:1000494;1.26e-09;10!CL:1000449;9.10e-09;15!CL:1000497;2.08e-07;17!CL:0002518;2.08e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.23e-10,10;CL:1000494,4.23e-10,10;CL:1000449,3.45e-09,15;CL:1000497,9.09e-08,17;CL:0002518,9.09e-08,17;CL:0000669,6.89e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004211;1.26e-09;10!UBERON:0009773;1.26e-09;10!UBERON:0001231;1.26e-09;10!UBERON:0004810;1.26e-09;10!UBERON:0006555;9.10e-09;15!UBERON:0004819;9.10e-09;15!UBERON:0001285;9.10e-09;15!UBERON:0007684;9.10e-09;15!UBERON:0002113;9.50e-08;24!UBERON:0011143;9.50e-08;24!UBERON:0000489;9.61e-07;29 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.64e-10!365;UBERON:0005256!1.15e-08!143;UBERON:0000481!6.31e-08!347;UBERON:0000119!3.25e-07!312;UBERON:0002100!9.21e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.26e-09;10!UBERON:0009773;1.26e-09;10!UBERON:0001231;1.26e-09;10!UBERON:0004810;1.26e-09;10!UBERON:0006555;9.10e-09;15!UBERON:0004819;9.10e-09;15!UBERON:0001285;9.10e-09;15!UBERON:0007684;9.10e-09;15!UBERON:0002113;9.50e-08;24!UBERON:0011143;9.50e-08;24!UBERON:0000489;9.61e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.23e-10,10;UBERON:0003104,1.03e-09,160;UBERON:0009142,1.03e-09,160;UBERON:0004211,3.45e-09,15;UBERON:0009773,3.45e-09,15;UBERON:0001231,3.45e-09,15;UBERON:0001285,3.45e-09,15;UBERON:0007684,3.45e-09,15;UBERON:0004208,3.45e-09,15;UBERON:0006555,1.97e-08,16;UBERON:0004819,1.97e-08,16;UBERON:0002417,8.61e-08,60;UBERON:0000916,8.61e-08,60;UBERON:0002113,6.13e-07,26;UBERON:0003918,6.13e-07,26;UBERON:0011143,6.13e-07,26;UBERON:0005095,6.13e-07,26;UBERON:0007687,6.13e-07,26 | |||
|phase1_expression=1.09007027562334,1.49870366723688,0.140954404095971,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0,1.22866968250754,2.09340350391728,0.218441372130172,0.791300934685361,0.37129905888014,1.65698687863958,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,1.60057375499824,0.816002764977012,0.313454721478088,2.0036519099174,0.958120975510189,2.76193807108566,0.305653622991805,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,3.2529523714611,0.50133791063589,1.15877215168659,0,0,0.567208902984407,1.33037638477538,0.527008714158756,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0.419499436209906,0.825354125820202,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,1.31780417436063,0,0,0.496971951695318,1.13967460498122,1.19168262731897,2.0078563452417,0,1.68203280042692,1.06748995729705,1.72667283892012,0.311211035399766,0.538842688278752,0.163461903113459,0.454072282934794,0,0.468642863667593,0.312160076830321,0,0,0.352303495931295,0.485618833104395,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.741800787835671,1.82032272387605,0.718618141816238,0.168336113954066,0.250237039743928,0,0.877955241761676,2.14541457059314,0.600952235626387,0.567160915800105,3.04962380671065,1.49490172172997,0.847727604638247,1.50045548042201,0.721367704669072,0.772921620136887,1.11670113798954,2.19409231913646,1.94874010322397,1.51460264546469,0.552299391853796,0.969876340912871,1.06502877754984,2.11579406278045,1.01736355386293,0.966304265816484,1.90922284413584,0.860413786167011,0.731842236777572,0.132529768321485,0.348581828608555,0.829288440122964,0.252320850875628,0.72995471815166,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.709840800239063,0.842923450390509,0,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0,0.738155454624648,2.80483547606892,4.5273141246454,5.88034845542168,1.26755034821831,0,0,0.441463099414651,1.72183813960359,0.343135620597051,1.75600456653801,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.695582429850461,1.05667824812239,0.288732895522148,0,0,0,0,0,0.468008530278475,0,0,1.51183915378974,0.992425680696705,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,1.23344192779897,1.74384027533312,0.51336800074665,1.55126058909333,0,0,2.12750493267896,1.04007436911366,0.771622122786426,1.41849132023278,0.799266537048298,0,3.7983512377401,0,0,1.42156779497018,0,6.63166629531089,16.5591357134056,8.19778527692868,0,0,0,1.19812427745791,0,2.85273810081437,0.289562613335158,2.87666851570537,0.537182889719687,0,0.197030760201927,0.215627574859517,0.256686072559497,2.54094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,1.10422342547226,1.00034104211935,0.813795071099207,0.623912584592421,2.14114786556594,0.630809660135739,0.234282829985426,0.902838299183157,2.27407504055985,0,1.32845119707087,1.29058417979192,0.434418072340414,2.93701736194111,1.71571711905428,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0.496215615637554,0.767309866440312,0.841980283299221,0.512556597022804,2.55853624533352,1.28683136914886,1.48418066444991,0.462629081407967,0.177561725313127,0.739144404124282,0,0.581051892299796,1.81289174387433,1.60405176242628,0.184161977871793,0.229628896329213,0.546273504020151,0.917870904715969,1.35359883872224,1.46329140498388,1.56869953835371,4.38417673959782,1.58327443339314,0,0,0.863663664408557,1.54227252690289,11.9216432519295,10.5354852509519,1.27438136522519,0,1.79099803777743,0,0,0,5.576248976895,1.30151357865721,0.103041011647722,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0.870036464629098,0,0.15350367472613,0.137836572484531,1.07420244868274,0.725083469571143,0.511359764496605,1.95870478422822,0,0.192190067365106,1.02090169995667,0.2023155617111,1.85938219718914,0.94443704049192,0,0.308033580176089,1.06461206063404,1.73986598415015,0.37064843820784,0.143124886741991,1.48863347743867,1.89827654831236,1.14378116354295,2.55897791311334,0.855877976067841,0,0.78494864019923,0.719489830333259,1.37268514868027,0.235624804691373,0.606547444719948,0,0.421258456238981,0.975267478179181,1.46228093778771,1.05650146756755,1.09199929126389,1.1312434556297,0,0.551365343546124,0,0.438450885253763,2.31510213706675,0,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.491245205065606,0,0,0.42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|phase1_expression=1.09007027562334,1.49870366723688,0.140954404095971,1.0007329835313,1.34088328328186,4.36169262050184,0,0,0,1.22866968250754,2.09340350391728,0.218441372130172,0.791300934685361,0.37129905888014,1.65698687863958,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,1.60057375499824,0.816002764977012,0.313454721478088,2.0036519099174,0.958120975510189,2.76193807108566,0.305653622991805,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,3.2529523714611,0.50133791063589,1.15877215168659,0,0,0.567208902984407,1.33037638477538,0.527008714158756,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0.419499436209906,0.825354125820202,0,0,0.35576626268671,0,0.805658634218294,0.760272105718513,0.732186172644509,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,1.31780417436063,0,0,0.496971951695318,1.13967460498122,1.19168262731897,2.0078563452417,0,1.68203280042692,1.06748995729705,1.72667283892012,0.311211035399766,0.538842688278752,0.163461903113459,0.454072282934794,0,0.468642863667593,0.312160076830321,0,0,0.352303495931295,0.485618833104395,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.741800787835671,1.82032272387605,0.718618141816238,0.168336113954066,0.250237039743928,0,0.877955241761676,2.14541457059314,0.600952235626387,0.567160915800105,3.04962380671065,1.49490172172997,0.847727604638247,1.50045548042201,0.721367704669072,0.772921620136887,1.11670113798954,2.19409231913646,1.94874010322397,1.51460264546469,0.552299391853796,0.969876340912871,1.06502877754984,2.11579406278045,1.01736355386293,0.966304265816484,1.90922284413584,0.860413786167011,0.731842236777572,0.132529768321485,0.348581828608555,0.829288440122964,0.252320850875628,0.72995471815166,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.709840800239063,0.842923450390509,0,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0,0.738155454624648,2.80483547606892,4.5273141246454,5.88034845542168,1.26755034821831,0,0,0.441463099414651,1.72183813960359,0.343135620597051,1.75600456653801,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.695582429850461,1.05667824812239,0.288732895522148,0,0,0,0,0,0.468008530278475,0,0,1.51183915378974,0.992425680696705,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,1.23344192779897,1.74384027533312,0.51336800074665,1.55126058909333,0,0,2.12750493267896,1.04007436911366,0.771622122786426,1.41849132023278,0.799266537048298,0,3.7983512377401,0,0,1.42156779497018,0,6.63166629531089,16.5591357134056,8.19778527692868,0,0,0,1.19812427745791,0,2.85273810081437,0.289562613335158,2.87666851570537,0.537182889719687,0,0.197030760201927,0.215627574859517,0.256686072559497,2.54094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,1.10422342547226,1.00034104211935,0.813795071099207,0.623912584592421,2.14114786556594,0.630809660135739,0.234282829985426,0.902838299183157,2.27407504055985,0,1.32845119707087,1.29058417979192,0.434418072340414,2.93701736194111,1.71571711905428,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0,0.496215615637554,0.767309866440312,0.841980283299221,0.512556597022804,2.55853624533352,1.28683136914886,1.48418066444991,0.462629081407967,0.177561725313127,0.739144404124282,0,0.581051892299796,1.81289174387433,1.60405176242628,0.184161977871793,0.229628896329213,0.546273504020151,0.917870904715969,1.35359883872224,1.46329140498388,1.56869953835371,4.38417673959782,1.58327443339314,0,0,0.863663664408557,1.54227252690289,11.9216432519295,10.5354852509519,1.27438136522519,0,1.79099803777743,0,0,0,5.576248976895,1.30151357865721,0.103041011647722,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0.870036464629098,0,0.15350367472613,0.137836572484531,1.07420244868274,0.725083469571143,0.511359764496605,1.95870478422822,0,0.192190067365106,1.02090169995667,0.2023155617111,1.85938219718914,0.94443704049192,0,0.308033580176089,1.06461206063404,1.73986598415015,0.37064843820784,0.143124886741991,1.48863347743867,1.89827654831236,1.14378116354295,2.55897791311334,0.855877976067841,0,0.78494864019923,0.719489830333259,1.37268514868027,0.235624804691373,0.606547444719948,0,0.421258456238981,0.975267478179181,1.46228093778771,1.05650146756755,1.09199929126389,1.1312434556297,0,0.551365343546124,0,0.438450885253763,2.31510213706675,0,0.608731130888112,0.30982349809975,0.281695602532241,0.143411352204052,0.491245205065606,0,0,0.42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| ||
|short_description=p@chr19:56091526..56091565,- | |short_description=p@chr19:56091526..56091565,- | ||
}} | }} |
Latest revision as of 17:33, 27 July 2015
Short description: | p@chr19:56091526..56091565, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56091526..56091565, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.23e-10 | 10 |
nephron tubule epithelial cell | 4.23e-10 | 10 |
epithelial cell of nephron | 3.45e-09 | 15 |
kidney cell | 9.09e-08 | 17 |
kidney epithelial cell | 9.09e-08 | 17 |
pericyte cell | 6.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 4.23e-10 | 10 |
mesenchyme | 1.03e-09 | 160 |
entire embryonic mesenchyme | 1.03e-09 | 160 |
nephron epithelium | 3.45e-09 | 15 |
renal tubule | 3.45e-09 | 15 |
nephron tubule | 3.45e-09 | 15 |
nephron | 3.45e-09 | 15 |
uriniferous tubule | 3.45e-09 | 15 |
nephrogenic mesenchyme | 3.45e-09 | 15 |
excretory tube | 1.97e-08 | 16 |
kidney epithelium | 1.97e-08 | 16 |
abdominal segment of trunk | 8.61e-08 | 60 |
abdomen | 8.61e-08 | 60 |
kidney | 6.13e-07 | 26 |
kidney mesenchyme | 6.13e-07 | 26 |
upper urinary tract | 6.13e-07 | 26 |
kidney rudiment | 6.13e-07 | 26 |
kidney field | 6.13e-07 | 26 |