FFCP PHASE1:Hg19::chr3:191074978..191074992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:191074978..191074992,+ | |||
|coexpression_cluster_id=C161 | |coexpression_cluster_id=C161 | ||
|description=CAGE_peak_at_chr3:191074978..191074992,+ | |description=CAGE_peak_at_chr3:191074978..191074992,+ | ||
|id=chr3:191074978..191074992,+ | |id=chr3:191074978..191074992,+ | ||
|ontology_enrichment_celltype=CL:0002097;1.82e-11;2!CL:0000077;3.86e-10;19!CL:1000413;9.65e-10;9!CL:0000174;4.52e-08;3!CL:0000076;6.06e-07;63 | |ontology_enrichment_celltype=CL:0000076!1.39e-15!62;CL:0000213!1.57e-13!57;CL:0000215!1.57e-13!57;CL:0000071!2.99e-11!18;CL:0002546!2.99e-11!18;CL:0002139!5.04e-11!24;CL:1000413!1.17e-10!9;CL:0000222!2.45e-09!119;CL:0002544!9.21e-09!6;CL:0000077!1.23e-08!19;CL:0000115!8.50e-08!35;CL:0002078!1.45e-07!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0002097;1.82e-11;2!CL:0000077;3.86e-10;19!CL:1000413;9.65e-10;9!CL:0000174;4.52e-08;3!CL:0000076;6.06e-07;63 | ||
|ontology_enrichment_disease=DOID:4468;3.34e-11;2 | |ontology_enrichment_celltype_v019_2=CL:0002097,1.82e-11,2;CL:0000076,2.53e-11,63;CL:0000077,4.30e-10,19;CL:1000413,8.46e-10,9;CL:0000213,1.06e-08,58;CL:0000215,1.06e-08,58;CL:0000174,4.52e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0003915;9.65e-10;9!UBERON:0004700;9.65e-10;9!UBERON:0001917;9.65e-10;9!UBERON:0002369;4.52e-08;3!UBERON:0001235;4.52e-08;3!UBERON:0006858;4.52e-08;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.99e-11!18;UBERON:0004638!2.99e-11!18;UBERON:0004852!2.99e-11!18;UBERON:0003915!1.17e-10!9;UBERON:0004700!1.17e-10!9;UBERON:0001917!1.17e-10!9;UBERON:0000487!2.22e-10!22;UBERON:0001981!1.02e-09!60;UBERON:0007500!1.02e-09!60;UBERON:0004537!1.02e-09!60;UBERON:0006965!1.02e-09!60;UBERON:0004535!1.09e-09!110;UBERON:0000055!1.35e-09!69;UBERON:0002049!2.88e-09!79;UBERON:0007798!2.88e-09!79;UBERON:0004872!3.25e-09!84;UBERON:0001637!3.28e-09!42;UBERON:0003509!3.28e-09!42;UBERON:0004572!3.28e-09!42;UBERON:0001009!3.29e-09!113;UBERON:0003914!5.27e-09!118;UBERON:0006914!9.00e-09!25;UBERON:0000947!9.96e-08!21;UBERON:0010191!9.96e-08!21;UBERON:0004573!4.29e-07!33;UBERON:0004571!4.29e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;9.65e-10;9!UBERON:0004700;9.65e-10;9!UBERON:0001917;9.65e-10;9!UBERON:0002369;4.52e-08;3!UBERON:0001235;4.52e-08;3!UBERON:0006858;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,8.46e-10,9;UBERON:0004700,8.46e-10,9;UBERON:0001917,8.46e-10,9;UBERON:0002369,4.52e-08,3;UBERON:0001235,4.52e-08,3;UBERON:0006858,4.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.69592382577203,0,0.275118041940067,1.46296476575767,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0,0,0,0.337552664482532,0,0,0,0,0,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.728163130497081,1.44876399560722,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0.889563386041866,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0.970722711091971,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,37.0983953078621,1.04397716786085,0.226705925512272,0,0,0,2.16161013012681,0.219284049578707,0,0.192914038270915,0.675769762612291,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,1.69592382577203,0,0.275118041940067,1.46296476575767,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0,0,0,0.337552664482532,0,0,0,0,0,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.728163130497081,1.44876399560722,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0.889563386041866,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19472429772959,0,0.970722711091971,0,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0.673498977531838,0,0,37.0983953078621,1.04397716786085,0.226705925512272,0,0,0,2.16161013012681,0.219284049578707,0,0.192914038270915,0.675769762612291,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:191074978..191074992,+ | |short_description=p@chr3:191074978..191074992,+ | ||
}} | }} |
Latest revision as of 19:28, 29 July 2015
Short description: | p@chr3:191074978..191074992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:191074978..191074992, + |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.82e-11 | 2 |
squamous epithelial cell | 2.53e-11 | 63 |
mesothelial cell | 4.30e-10 | 19 |
endothelial cell of artery | 8.46e-10 | 9 |
lining cell | 1.06e-08 | 58 |
barrier cell | 1.06e-08 | 58 |
steroid hormone secreting cell | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 8.46e-10 | 9 |
arterial system endothelium | 8.46e-10 | 9 |
endothelium of artery | 8.46e-10 | 9 |
adrenal gland | 4.52e-08 | 3 |
adrenal cortex | 4.52e-08 | 3 |
adrenal/interrenal gland | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.47e-11 | 2 |