FFCP PHASE1:Hg19::chr1:11561846..11561857,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:11561846..11561857,+
|short_description=p5@PTCHD2
|description=CAGE_peak_5_at_PTCHD2_5end
|association_with_transcript=-134bp_to_AL117236_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57540 | |EntrezGene=57540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29251 | |HGNC=29251 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2K9 | |UniProt=Q9P2K9 | ||
|association_with_transcript=-134bp_to_AL117236_5end | |||
|cluster_id=chr1:11561846..11561857,+ | |||
|description=CAGE_peak_5_at_PTCHD2_5end | |||
|id=chr1:11561846..11561857,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.61e-34;2!CL:0002535;5.96e-34;2!CL:0000174;2.62e-23;3!CL:0002548;2.59e-12;6!CL:0000150;1.04e-08;9!CL:0000163;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.61e-34,2;CL:0002535,5.04e-34,2;CL:0000174,2.62e-23,3;CL:0002548,2.74e-12,6;CL:0000150,1.04e-08,9;CL:0000163,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.71e-14;5!DOID:170;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.60e-14,5;DOID:170,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.29e-19!32;UBERON:0001049!7.91e-19!57;UBERON:0005068!7.91e-19!57;UBERON:0006241!7.91e-19!57;UBERON:0007135!7.91e-19!57;UBERON:0000956!1.81e-18!25;UBERON:0000203!1.81e-18!25;UBERON:0002616!4.78e-18!59;UBERON:0001017!5.21e-18!82;UBERON:0002020!5.34e-18!34;UBERON:0003528!5.34e-18!34;UBERON:0001893!8.06e-18!34;UBERON:0003075!2.34e-17!86;UBERON:0007284!2.34e-17!86;UBERON:0005743!6.16e-17!86;UBERON:0002780!9.46e-17!41;UBERON:0001890!9.46e-17!41;UBERON:0006240!9.46e-17!41;UBERON:0002346!2.38e-16!90;UBERON:0000955!2.39e-16!69;UBERON:0006238!2.39e-16!69;UBERON:0003080!2.79e-16!42;UBERON:0001950!3.86e-16!20;UBERON:0002791!7.26e-16!33;UBERON:0000073!7.49e-15!94;UBERON:0001016!7.49e-15!94;UBERON:0002619!1.45e-14!22;UBERON:0007023!1.95e-14!115;UBERON:0003135!9.24e-13!11;UBERON:0000473!1.62e-12!8;UBERON:0003056!2.97e-10!61;UBERON:0000200!6.38e-10!6;UBERON:0000025!1.27e-08!194;UBERON:0002360!2.49e-08!2;UBERON:0000094!2.49e-08!2;UBERON:0007645!2.49e-08!2;UBERON:0001871!8.06e-08!7;UBERON:0004121!9.36e-08!169;UBERON:0001872!1.81e-07!5;UBERON:0000924!1.87e-07!173;UBERON:0006601!1.87e-07!173;UBERON:0000033!2.59e-07!123;UBERON:0000153!8.77e-07!129;UBERON:0007811!8.77e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.96e-34;2!UBERON:0004801;5.96e-34;2!UBERON:0002369;2.62e-23;3!UBERON:0001235;2.62e-23;3!UBERON:0006858;2.62e-23;3!UBERON:0000002;2.59e-12;6!UBERON:0001560;2.59e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.04e-34,2;UBERON:0004801,5.04e-34,2;UBERON:0002369,2.62e-23,3;UBERON:0001235,2.62e-23,3;UBERON:0006858,2.62e-23,3;UBERON:0000002,2.45e-12,6;UBERON:0001560,2.45e-12,6 | |||
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| ||
|short_description=p5@PTCHD2 | |||
}} | }} |
Latest revision as of 07:43, 16 September 2015
Short description: | p5@PTCHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTCHD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -134bp_to_AL117236_5end |
EntrezGene: | PTCHD2 |
HGNC: | 29251 |
UniProt: | Q9P2K9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.61e-34 | 2 |
epithelial cell of cervix | 5.04e-34 | 2 |
steroid hormone secreting cell | 2.62e-23 | 3 |
cardiac fibroblast | 2.74e-12 | 6 |
glandular epithelial cell | 1.04e-08 | 9 |
endocrine cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.04e-34 | 2 |
cervix epithelium | 5.04e-34 | 2 |
adrenal gland | 2.62e-23 | 3 |
adrenal cortex | 2.62e-23 | 3 |
adrenal/interrenal gland | 2.62e-23 | 3 |
uterine cervix | 2.45e-12 | 6 |
neck of organ | 2.45e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.60e-14 | 5 |
endocrine gland cancer | 2.19e-12 | 6 |