FFCP PHASE1:Hg19::chr1:152975503..152975534,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:152975503..152975534,+
|short_description=p1@AB587575
|description=CAGE_peak_1_at_AB587575_5end
|association_with_transcript=7bp_to_AB587575_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_AB587575_5end | |||
|cluster_id=chr1:152975503..152975534,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_AB587575_5end | |||
|id=chr1:152975503..152975534,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.90e-10!43;CL:0002623!3.68e-08!3;CL:0000349!1.41e-07!3;CL:0002577!1.41e-07!3;CL:0000223!6.55e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002623;2.21e-18;3!CL:0002537;1.76e-11;5!CL:0000622;2.00e-11;5!CL:0000154;1.13e-09;6!CL:0000150;9.78e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.94e-18,3;CL:0000622,1.85e-11,5;CL:0002537,1.85e-11,5;CL:0000154,1.06e-09,6;CL:0000150,9.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.73e-15;1!UBERON:0008814;3.82e-08;2!UBERON:0010056;3.82e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-12!14;UBERON:0000158!1.28e-12!14;UBERON:0001987!9.75e-12!4;UBERON:0004340!9.75e-12!4;UBERON:0003124!1.46e-11!7;UBERON:0003127!1.58e-11!2;UBERON:0005795!1.56e-10!22;UBERON:0004119!6.54e-10!169;UBERON:0000925!6.54e-10!169;UBERON:0006595!6.54e-10!169;UBERON:0000166!8.87e-09!21;UBERON:0000165!1.80e-08!28;UBERON:0000930!1.80e-08!28;UBERON:0001723!2.24e-08!3;UBERON:0001033!2.24e-08!3;UBERON:0010056!2.24e-08!3;UBERON:0000995!3.92e-08!21;UBERON:0001004!4.26e-08!72;UBERON:0003975!9.74e-08!22;UBERON:0000078!2.16e-07!18;UBERON:0003126!2.64e-07!7;UBERON:0001005!2.64e-07!7;UBERON:0000478!4.03e-07!24;UBERON:0000077!7.04e-07!130;UBERON:0002372!7.77e-07!1;UBERON:0001961!7.77e-07!1;UBERON:0001744!7.77e-07!1;UBERON:0001735!7.77e-07!1;UBERON:0004175!9.67e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.54e-19;3!UBERON:0001033;5.54e-19;3!UBERON:0005795;8.17e-15;1!UBERON:0002372;1.07e-14;1!UBERON:0001961;1.07e-14;1!UBERON:0001744;1.07e-14;1!UBERON:0001042;1.07e-14;1!UBERON:0001735;1.07e-14;1!UBERON:0000165;7.41e-12;28!UBERON:0001044;1.13e-09;6!UBERON:0003293;1.13e-09;6!UBERON:0003294;1.13e-09;6!UBERON:0010047;1.13e-09;6!UBERON:0003408;1.13e-09;6!UBERON:0000167;1.13e-09;6!UBERON:0001041;3.90e-09;14!UBERON:0000305;1.85e-08;7!UBERON:0000341;4.09e-08;2!UBERON:0006562;5.37e-08;2!UBERON:0003127;5.74e-08;2!UBERON:0000161;8.21e-07;19!UBERON:0000166;8.21e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,5.54e-19,3;UBERON:0001033,5.54e-19,3;UBERON:0010056,5.54e-19,3;UBERON:0000166,4.13e-15,22;UBERON:0002372,1.07e-14,1;UBERON:0001961,1.07e-14,1;UBERON:0001744,1.07e-14,1;UBERON:0001735,1.07e-14,1;UBERON:0000161,5.47e-13,36;UBERON:0001042,1.00e-12,10;UBERON:0009145,1.00e-12,10;UBERON:0006562,1.27e-11,11;UBERON:0000165,1.84e-11,29;UBERON:0000930,1.84e-11,29;UBERON:0001044,1.06e-09,6;UBERON:0003293,1.06e-09,6;UBERON:0003294,1.06e-09,6;UBERON:0010047,1.06e-09,6;UBERON:0000167,1.06e-09,6;UBERON:0000305,1.92e-08,7;UBERON:0000341,4.09e-08,2;UBERON:0003127,5.74e-08,2;UBERON:0004871,1.70e-07,8;UBERON:0000153,1.90e-07,62;UBERON:0007811,1.90e-07,62;UBERON:0001041,5.75e-07,87;UBERON:0001557,5.99e-07,19;UBERON:0001444,9.42e-07,49 | |||
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|short_description=p1@AB587575 | |||
}} | }} |
Latest revision as of 21:37, 27 July 2015
Short description: | p1@AB587575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB587575_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 7bp_to_AB587575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.94e-18 | 3 |
acinar cell | 1.85e-11 | 5 |
amnion mesenchymal stem cell | 1.85e-11 | 5 |
protein secreting cell | 1.06e-09 | 6 |
glandular epithelial cell | 9.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 5.54e-19 | 3 |
gustatory system | 5.54e-19 | 3 |
future tongue | 5.54e-19 | 3 |
oral opening | 4.13e-15 | 22 |
tonsil | 1.07e-14 | 1 |
mucosa-associated lymphoid tissue | 1.07e-14 | 1 |
lymphoid tissue | 1.07e-14 | 1 |
tonsillar ring | 1.07e-14 | 1 |
orifice | 5.47e-13 | 36 |
chordate pharynx | 1.00e-12 | 10 |
pharyngeal region of foregut | 1.00e-12 | 10 |
pharynx | 1.27e-11 | 11 |
mouth | 1.84e-11 | 29 |
stomodeum | 1.84e-11 | 29 |
saliva-secreting gland | 1.06e-09 | 6 |
gland of oral region | 1.06e-09 | 6 |
gland of foregut | 1.06e-09 | 6 |
oral gland | 1.06e-09 | 6 |
oral cavity | 1.06e-09 | 6 |
amnion | 1.92e-08 | 7 |
throat | 4.09e-08 | 2 |
open tracheal system trachea | 5.74e-08 | 2 |
somatic layer of lateral plate mesoderm | 1.70e-07 | 8 |
anterior region of body | 1.90e-07 | 62 |
craniocervical region | 1.90e-07 | 62 |
foregut | 5.75e-07 | 87 |
upper respiratory tract | 5.99e-07 | 19 |
subdivision of head | 9.42e-07 | 49 |