FFCP PHASE1:Hg19::chr21:28022135..28022171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:28022135..28022171,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr21:28022135..28022171,+ | |description=CAGE_peak_at_chr21:28022135..28022171,+ | ||
|id=chr21:28022135..28022171,+ | |id=chr21:28022135..28022171,+ | ||
|ontology_enrichment_celltype=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000333;1.48e-40;5!CL:0002321;1.22e-14;15 | ||
|ontology_enrichment_disease=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!2.53e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;4.27e-34;6!DOID:171;3.81e-21;10!DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.27e-34,6;DOID:171,3.81e-21,10;DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001874!3.25e-19!1;UBERON:0001882!5.62e-19!1;UBERON:0005403!5.62e-19!1;UBERON:0000369!9.72e-19!4;UBERON:0002435!9.72e-19!4;UBERON:0000204!9.72e-19!4;UBERON:0010082!9.72e-19!4;UBERON:0004733!3.30e-14!12;UBERON:0002028!3.30e-14!12;UBERON:0007277!3.30e-14!12;UBERON:0004732!3.63e-13!13;UBERON:0002037!4.01e-13!6;UBERON:0006215!4.01e-13!6;UBERON:0003076!1.70e-11!15;UBERON:0003057!1.70e-11!15;UBERON:0009663!3.85e-11!7;UBERON:0001049!4.79e-11!57;UBERON:0005068!4.79e-11!57;UBERON:0006241!4.79e-11!57;UBERON:0007135!4.79e-11!57;UBERON:0002616!1.13e-10!59;UBERON:0000007!1.89e-10!2;UBERON:0002346!2.12e-09!90;UBERON:0002680!4.61e-09!9;UBERON:0001895!4.61e-09!9;UBERON:0010092!4.61e-09!9;UBERON:0000955!5.41e-09!69;UBERON:0006238!5.41e-09!69;UBERON:0002308!7.16e-09!9;UBERON:0002420!7.16e-09!9;UBERON:0000125!7.16e-09!9;UBERON:0007245!7.16e-09!9;UBERON:0010009!7.16e-09!9;UBERON:0010011!7.16e-09!9;UBERON:0000454!7.16e-09!9;UBERON:0000073!8.43e-09!94;UBERON:0001016!8.43e-09!94;UBERON:0001017!1.44e-07!82;UBERON:0007023!2.56e-07!115;UBERON:0003075!2.66e-07!86;UBERON:0007284!2.66e-07!86;UBERON:0005383!2.79e-07!3;UBERON:0005382!2.79e-07!3;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3;UBERON:0005743!3.25e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.48e-40;5!UBERON:0002410;1.48e-40;5!UBERON:0000010;2.62e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.48e-40,5;UBERON:0002410,1.48e-40,5;UBERON:0000010,2.62e-23,8 | |||
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|short_description=p@chr21:28022135..28022171,+ | |short_description=p@chr21:28022135..28022171,+ | ||
}} | }} |
Latest revision as of 17:05, 28 July 2015
Short description: | p@chr21:28022135..28022171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:28022135..28022171, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.48e-40 | 5 |
autonomic nervous system | 1.48e-40 | 5 |
peripheral nervous system | 2.62e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.27e-34 | 6 |
neuroectodermal tumor | 3.81e-21 | 10 |
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |