FFCP PHASE1:Hg19::chr1:159915336..159915350,-: Difference between revisions
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|id=chr1:159915336..159915350,-
|short_description=p@chr1:159915336..159915350,-
|description=CAGE_peak_at_chr1:159915336..159915350,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:159915336..159915350,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr1:159915336..159915350,- | |||
|id=chr1:159915336..159915350,- | |||
|ontology_enrichment_celltype=CL:0002322!1.01e-16!5;CL:0002319!6.91e-11!25;CL:0000047!3.92e-10!8;CL:0000540!6.34e-08!6;CL:0000031!6.34e-08!6;CL:0000404!6.34e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.74e-50;2!CL:0000242;2.74e-50;2!CL:0000312;4.21e-21;5!CL:0000240;7.67e-18;6!CL:0000311;7.67e-18;6!CL:0000079;7.67e-18;6!CL:0000237;7.67e-18;6!CL:0000362;2.19e-12;9!CL:0002159;1.86e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.74e-50,2;CL:0000312,4.21e-21,5;CL:0000240,7.67e-18,6;CL:0000311,7.67e-18,6;CL:0000079,7.67e-18,6;CL:0000237,7.67e-18,6;CL:0000036,7.67e-18,6;CL:0000357,7.67e-18,6;CL:0000114,7.67e-18,6;CL:0000362,2.19e-12,9;CL:0002159,1.86e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;7.67e-18;6!CL:0000114;7.67e-18;6!UBERON:0009117;3.02e-11;10!UBERON:0005564;3.02e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.07e-13;8!UBERON:0003135;2.37e-10;11!UBERON:0001003;5.55e-08;15!UBERON:0007376;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.07e-13,8;UBERON:0003135,2.37e-10,11;UBERON:0001003,5.55e-08,15;UBERON:0007376,5.55e-08,15;UBERON:0007383,5.55e-08,15 | |||
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|short_description=p@chr1:159915336..159915350,- | |||
}} | }} |
Latest revision as of 23:11, 27 July 2015
Short description: | p@chr1:159915336..159915350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:159915336..159915350, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.74e-50 | 2 |
keratinocyte | 4.21e-21 | 5 |
stratified squamous epithelial cell | 7.67e-18 | 6 |
keratin accumulating cell | 7.67e-18 | 6 |
stratified epithelial cell | 7.67e-18 | 6 |
keratinizing barrier epithelial cell | 7.67e-18 | 6 |
epithelial fate stem cell | 7.67e-18 | 6 |
stratified epithelial stem cell | 7.67e-18 | 6 |
surface ectodermal cell | 7.67e-18 | 6 |
epidermal cell | 2.19e-12 | 9 |
general ecto-epithelial cell | 1.86e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 1.07e-13 | 8 |
male reproductive organ | 2.37e-10 | 11 |
skin epidermis | 5.55e-08 | 15 |
outer epithelium | 5.55e-08 | 15 |
enveloping layer of ectoderm | 5.55e-08 | 15 |