FFCP PHASE1:Hg19::chr12:57625582..57625598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6472 | |EntrezGene=6472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10852 | |HGNC=10852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=351bp_to_ENST00000555213_5end | |association_with_transcript=351bp_to_ENST00000555213_5end | ||
|cluster_id=chr12:57625582..57625598,+ | |||
|description=CAGE_peak_11_at_SHMT2_5end | |description=CAGE_peak_11_at_SHMT2_5end | ||
|id=chr12:57625582..57625598,+ | |id=chr12:57625582..57625598,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.18e-11!679;CL:0000004!3.18e-11!679;CL:0000255!3.18e-11!679;CL:0000012!1.18e-10!682;CL:0000066!3.67e-08!254;CL:0002321!9.45e-08!248;CL:0000220!2.62e-07!246;CL:0000003!3.05e-07!722 | |ontology_enrichment_celltype=CL:0000548!3.18e-11!679;CL:0000004!3.18e-11!679;CL:0000255!3.18e-11!679;CL:0000012!1.18e-10!682;CL:0000066!3.67e-08!254;CL:0002321!9.45e-08!248;CL:0000220!2.62e-07!246;CL:0000003!3.05e-07!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.00e-08!239;DOID:162!5.89e-08!235 | |ontology_enrichment_disease=DOID:14566!4.00e-08!239;DOID:162!5.89e-08!235 | ||
|ontology_enrichment_disease_v019=DOID:154;8.34e-07;2!DOID:4236;8.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,9.90e-07,2;DOID:4236,9.90e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0,1.39560233594486,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,1.34465029290355,1.80808358407193,1.46062018077475,0,0,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0.251085279189606,0.61130724598361,0.738905305049512,0.393553906568396,0,0,0,0,0.30120591877825,2.9580320813343,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.422510572623884,0.425208599930087,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,1.44846518960824,0,3.40644409211845,0.283604451492204,0.665188192387692,0.43917392846563,0.130979075497713,0,1.48313777113772,0.324547393654683,0,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.550236083880135,0.626984899610432,0.516833518338658,0,0,0,0,0.24406205754817,0,1.62028389576352,0.446498641420399,0.673588117878509,0.225222960966644,1.53316637465883,0,0.732806975721629,0,0,0.436094052142534,0,0.506522046658319,0,0,0.354668382198357,0.560677600142307,1.06748995729705,1.2333377420858,0,0.942974704487816,0.653847612453835,0,0,0,0,0.570471821544449,0.597794722207204,0.352303495931295,0.485618833104395,0.140450806702248,0,0.982674538494144,0.206651562351531,0,0.989067717114227,0,0,0,0.750711119231785,0,0.438977620880838,0.30648779579902,0.751190294532984,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,1.70763188581434,0.530119073285941,0.580969714347592,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,1.65629520055781,0.168584690078102,0.241011029883482,0.661763836394364,0.435758888184812,0.949082476444386,0.674156540800822,0.588664395376038,0.769494313892781,0,1.40241773803446,0,1.47008711385542,0,1.96565443335525,0,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,1.10581869652794,0.0925884451585296,0.651616610620649,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.268675568108545,0,1.91691339582606,0,0,0,0,0,0,0,2.34434894420094,0,0.822619941626588,0,0,0,0,0.2933531432838,0.258543431515556,3.57656445851882,1.690605505112,0,0,0,1.41849132023278,0.799266537048298,0.57191197463259,0.542621605391443,1.64648067356154,0,0.710783897485092,0,0,0,0.199945982364114,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0.205476322550383,0,0.448340575974109,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,1.00034104211935,1.89885516589815,1.24782516918484,3.21172179834891,1.41932173530541,0.35142424497814,0,0,2.0694614258501,0,0.368738337083406,0.260650843404249,0.195801157462741,1.02943027143257,0,0.215714200818617,0.106727557803444,0,1.66435439510497,1.81434175997808,0.496215615637554,0,0.561320188866147,0.128139149255701,0,0.482561763430822,0,0.308419387605311,0.710246901252508,0,0.519254429183621,0.697262270759755,0.241718899183244,0.601519410909855,0.276242966807689,0,0.546273504020151,0.917870904715969,0,0.385076685522074,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,0.732555718546747,0.247528499761764,0,0,0,0.193341436584244,0.616194468458578,0.614014698904518,0.275673144969061,0.429680979473094,0.145016693914229,0.511359764496605,0.267096106940212,0,0.768760269460425,0.127612712494584,0.50578890427775,0.929691098594572,0,0,0,0,0,0,0.572499546967965,0,0,0.38126038784765,0,0,0.318203247925937,2.35484592059769,0,0.823611089208164,1.06031162111118,0,1.58510321173008,0.842516912477962,0.975267478179181,0.243713489631284,3.16950440270266,0.136499911407986,1.27264888758341,1.13008116620243,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.563391205064483,0.286822704408103,0.294747123039363,0.7133421029625,0.709522128141196,0.844430541190656,0.658589785919804,0,1.74967360122491,0.192444225451024,0,2.17781969722645,0.188287601553558,1.29151611801369,1.68471475667626,0.886860307073351,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0.490080431962063,0.185803175125719,0,0.426851060090485,0,0.399158742865633,0.191505370132367,0.423347165447766,0.649243880549111,0,0,0.313359791546046,2.50634477090067,0,0.321176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| ||
|short_description=p11@SHMT2 | |short_description=p11@SHMT2 | ||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p11@SHMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SHMT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 351bp_to_ENST00000555213_5end |
EntrezGene: | SHMT2 |
HGNC: | 10852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 9.90e-07 | 2 |
carcinosarcoma | 9.90e-07 | 2 |