FFCP PHASE1:Hg19::chr7:84122054..84122070,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |UniProt=C9JD25 | ||
|association_with_transcript=-14bp_to_ENST00000424555_5end | |association_with_transcript=-14bp_to_ENST00000424555_5end | ||
|cluster_id=chr7:84122054..84122070,- | |||
|description=CAGE_peak_15_at_SEMA3A_5end | |description=CAGE_peak_15_at_SEMA3A_5end | ||
|id=chr7:84122054..84122070,- | |id=chr7:84122054..84122070,- | ||
|ontology_enrichment_celltype=CL:0002620!1.13e-25!23;CL:0000057!1.03e-15!75;CL:0000136!3.97e-07!15;CL:0002551!8.68e-07!6 | |ontology_enrichment_celltype=CL:0002620!1.13e-25!23;CL:0000057!1.03e-15!75;CL:0000136!3.97e-07!15;CL:0002551!8.68e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.35e-20;23!CL:0000136;9.40e-12;13!CL:0000057;1.55e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.29e-20,23;CL:0000057,1.31e-16,76;CL:0000136,3.42e-10,15;CL:0002320,2.21e-07,361;CL:0000134,8.05e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.65e-10!5;DOID:450!3.65e-10!5;DOID:66!3.65e-10!5;DOID:423!3.65e-10!5;DOID:0080000!3.65e-10!5;DOID:11722!3.65e-10!5 | |ontology_enrichment_disease=DOID:17!3.65e-10!5;DOID:450!3.65e-10!5;DOID:66!3.65e-10!5;DOID:423!3.65e-10!5;DOID:0080000!3.65e-10!5;DOID:11722!3.65e-10!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.39e-11;5!DOID:450;1.39e-11;5!DOID:66;1.39e-11;5!DOID:423;1.39e-11;5!DOID:0080000;1.39e-11;5!DOID:11722;1.39e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.35e-11,5;DOID:450,1.35e-11,5;DOID:66,1.35e-11,5;DOID:423,1.35e-11,5;DOID:0080000,1.35e-11,5;DOID:11722,1.35e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.27e-21!45;UBERON:0002416!1.27e-21!45;UBERON:0002097!4.18e-19!40;UBERON:0003102!1.32e-15!95;UBERON:0000475!7.30e-07!365 | |ontology_enrichment_uberon=UBERON:0002199!1.27e-21!45;UBERON:0002416!1.27e-21!45;UBERON:0002097!4.18e-19!40;UBERON:0003102!1.32e-15!95;UBERON:0000475!7.30e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.32e-12;46!UBERON:0002416;1.32e-12;46!UBERON:0002097;1.98e-12;41!UBERON:0003102;3.02e-10;50!UBERON:0007029;2.75e-07;1!UBERON:0005795;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.93e-16,46;UBERON:0002416,1.93e-16,46;UBERON:0002097,1.04e-15,41;UBERON:0003102,9.58e-14,99;UBERON:0002384,7.34e-08,371;UBERON:0007029,2.67e-07,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,1.56711376919903,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,1.01392563272577,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.117434498643765,0.323745888736263,0.561803226808994,1.83738754129404,0,1.65321249881225,0,0,0,0,2.02003336744879,0.625592599359821,2.49357703935765,0,0,0,0,0.358779271377724,0.85422955527427,3.81477422087211,4.20127534518163,3.81294358182224,3.34932702059318,4.28068769562657,1.35021065793013,0.68205903612839,3.02920529092937,7.17989209409935,5.81925804547723,0.710019185033229,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,4.9076596687656,0,0,0,0,0,0,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,1.06765302817952,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0.849523652246594,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,1.37897349296586,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.957003479195758,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0.458146384663663,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,15.7765162977147,9.02483618481721,7.65863941908654,11.1476694441334,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,1.24415452006595,0.127894371303652,0.107824811396682,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0.336283722218824,2.42786241694653,0.91064876540519,0.443511850813194,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.214429632529969,0,0.116241425368125,0.869291361512897,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,0,2.4285549652957,0,0.397901550322736,0.237840181555137,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,2.83988811947732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0,0,0,0.435433495793923,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,1.22068853494722,0,0.402547587182052,0 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| ||
|short_description=p15@SEMA3A | |short_description=p15@SEMA3A | ||
}} | }} |
Latest revision as of 19:49, 19 September 2015
Short description: | p15@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.29e-20 | 23 |
fibroblast | 1.31e-16 | 76 |
fat cell | 3.42e-10 | 15 |
connective tissue cell | 2.21e-07 | 361 |
mesenchymal cell | 8.05e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
integument | 1.93e-16 | 46 |
integumental system | 1.93e-16 | 46 |
skin of body | 1.04e-15 | 41 |
surface structure | 9.58e-14 | 99 |
connective tissue | 7.34e-08 | 371 |
surface | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.35e-11 | 5 |
myotonic disease | 1.35e-11 | 5 |
muscle tissue disease | 1.35e-11 | 5 |
myopathy | 1.35e-11 | 5 |
muscular disease | 1.35e-11 | 5 |
myotonic dystrophy | 1.35e-11 | 5 |