FFCP PHASE1:Hg19::chr1:155048200..155048207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:155048200..155048207,+ | |||
|coexpression_cluster_id=C150 | |coexpression_cluster_id=C150 | ||
|description=CAGE_peak_at_chr1:155048200..155048207,+ | |description=CAGE_peak_at_chr1:155048200..155048207,+ | ||
|id=chr1:155048200..155048207,+ | |id=chr1:155048200..155048207,+ | ||
|ontology_enrichment_celltype=CL:0000242!2.04e-45!2;CL:0002553!2.10e-23!1;CL:0000312!7.24e-19!5;CL:0000240!6.71e-16!6;CL:0000311!6.71e-16!6;CL:0000079!6.71e-16!6;CL:0000237!6.71e-16!6;CL:0000036!6.71e-16!6;CL:0000357!6.71e-16!6;CL:0000114!6.71e-16!6;CL:0000362!3.54e-12!8;CL:0002159!7.50e-08!13 | |ontology_enrichment_celltype=CL:0000242!2.04e-45!2;CL:0002553!2.10e-23!1;CL:0000312!7.24e-19!5;CL:0000240!6.71e-16!6;CL:0000311!6.71e-16!6;CL:0000079!6.71e-16!6;CL:0000237!6.71e-16!6;CL:0000036!6.71e-16!6;CL:0000357!6.71e-16!6;CL:0000114!6.71e-16!6;CL:0000362!3.54e-12!8;CL:0002159!7.50e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0000123;4.61e-131;2!CL:0000242;4.61e-131;2!CL:0000312;2.19e-53;5!CL:0000240;9.76e-45;6!CL:0000311;9.76e-45;6!CL:0000079;9.76e-45;6!CL:0000237;9.76e-45;6!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000095;4.91e-15;17!CL:0002319;6.25e-11;25!CL:0002077;1.21e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.61e-131,2;CL:0000312,2.19e-53,5;CL:0000240,9.76e-45,6;CL:0000311,9.76e-45,6;CL:0000079,9.76e-45,6;CL:0000237,9.76e-45,6;CL:0000036,9.76e-45,6;CL:0000357,9.76e-45,6;CL:0000114,9.76e-45,6;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0002319,6.25e-11,25;CL:0002077,6.54e-09,34;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;9.76e-45;6!CL:0000114;9.76e-45;6 | |||
|ontology_enrichment_disease=DOID:3119!2.95e-07!14;DOID:1324!8.58e-07!15 | |ontology_enrichment_disease=DOID:3119!2.95e-07!14;DOID:1324!8.58e-07!15 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.22e-44!2;UBERON:0003296!6.42e-23!4;UBERON:0010133!6.42e-23!4;UBERON:0001894!1.49e-13!7;UBERON:0006222!1.49e-13!7;UBERON:0001003!2.36e-07!14;UBERON:0007376!2.36e-07!14;UBERON:0007383!2.36e-07!14 | |ontology_enrichment_uberon=UBERON:0000007!1.22e-44!2;UBERON:0003296!6.42e-23!4;UBERON:0010133!6.42e-23!4;UBERON:0001894!1.49e-13!7;UBERON:0006222!1.49e-13!7;UBERON:0001003!2.36e-07!14;UBERON:0007376!2.36e-07!14;UBERON:0007383!2.36e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
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|short_description=p@chr1:155048200..155048207,+ | |short_description=p@chr1:155048200..155048207,+ | ||
}} | }} |
Latest revision as of 22:10, 27 July 2015
Short description: | p@chr1:155048200..155048207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155048200..155048207, + |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.61e-131 | 2 |
keratinocyte | 2.19e-53 | 5 |
stratified squamous epithelial cell | 9.76e-45 | 6 |
keratin accumulating cell | 9.76e-45 | 6 |
stratified epithelial cell | 9.76e-45 | 6 |
keratinizing barrier epithelial cell | 9.76e-45 | 6 |
epithelial fate stem cell | 9.76e-45 | 6 |
stratified epithelial stem cell | 9.76e-45 | 6 |
surface ectodermal cell | 9.76e-45 | 6 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neural cell | 6.25e-11 | 25 |
ecto-epithelial cell | 6.54e-09 | 34 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.04e-18 | 15 |
outer epithelium | 1.04e-18 | 15 |
enveloping layer of ectoderm | 1.04e-18 | 15 |
skin of body | 1.42e-07 | 41 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |