FFCP PHASE1:Hg19::chr1:209797044..209797052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422894 | |EntrezGene=100422894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=38179 | |HGNC=38179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_NR_036213_5end | |association_with_transcript=-189bp_to_NR_036213_5end | ||
|cluster_id=chr1:209797044..209797052,- | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_7_at_MIR4260_5end | |description=CAGE_peak_7_at_MIR4260_5end | ||
|id=chr1:209797044..209797052,- | |id=chr1:209797044..209797052,- | ||
|ontology_enrichment_celltype=CL:0002076!6.74e-15!43;CL:0000244!3.38e-11!4;CL:0000731!3.38e-11!4;CL:0000223!4.27e-10!59;CL:0002368!1.02e-08!13;CL:0000312!1.05e-08!5;CL:0002159!1.80e-08!13;CL:0000240!2.55e-07!6;CL:0000311!2.55e-07!6;CL:0000079!2.55e-07!6;CL:0000237!2.55e-07!6;CL:0000036!2.55e-07!6;CL:0000357!2.55e-07!6;CL:0000114!2.55e-07!6;CL:0002231!3.72e-07!3;CL:0002251!5.77e-07!21;CL:0002166!6.19e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.74e-15!43;CL:0000244!3.38e-11!4;CL:0000731!3.38e-11!4;CL:0000223!4.27e-10!59;CL:0002368!1.02e-08!13;CL:0000312!1.05e-08!5;CL:0002159!1.80e-08!13;CL:0000240!2.55e-07!6;CL:0000311!2.55e-07!6;CL:0000079!2.55e-07!6;CL:0000237!2.55e-07!6;CL:0000036!2.55e-07!6;CL:0000357!2.55e-07!6;CL:0000114!2.55e-07!6;CL:0002231!3.72e-07!3;CL:0002251!5.77e-07!21;CL:0002166!6.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0000362,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease=DOID:171!1.48e-07!10;DOID:1749!2.55e-07!14 | |ontology_enrichment_disease=DOID:171!1.48e-07!10;DOID:1749!2.55e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:171;2.22e-27;10!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22!DOID:169;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22;DOID:169,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002619!3.18e-13!22;UBERON:0001869!3.25e-13!32;UBERON:0001893!2.44e-12!34;UBERON:0001950!1.45e-11!20;UBERON:0000956!1.60e-11!25;UBERON:0000203!1.60e-11!25;UBERON:0000200!2.47e-11!6;UBERON:0002791!1.55e-10!33;UBERON:0002020!3.48e-10!34;UBERON:0003528!3.48e-10!34;UBERON:0002780!6.21e-10!41;UBERON:0001890!6.21e-10!41;UBERON:0006240!6.21e-10!41;UBERON:0003080!1.18e-09!42;UBERON:0000365!4.86e-09!5;UBERON:0000924!1.15e-08!173;UBERON:0006601!1.15e-08!173;UBERON:0000349!2.47e-08!5;UBERON:0005910!1.35e-07!6 | |ontology_enrichment_uberon=UBERON:0002619!3.18e-13!22;UBERON:0001869!3.25e-13!32;UBERON:0001893!2.44e-12!34;UBERON:0001950!1.45e-11!20;UBERON:0000956!1.60e-11!25;UBERON:0000203!1.60e-11!25;UBERON:0000200!2.47e-11!6;UBERON:0002791!1.55e-10!33;UBERON:0002020!3.48e-10!34;UBERON:0003528!3.48e-10!34;UBERON:0002780!6.21e-10!41;UBERON:0001890!6.21e-10!41;UBERON:0006240!6.21e-10!41;UBERON:0003080!1.18e-09!42;UBERON:0000365!4.86e-09!5;UBERON:0000924!1.15e-08!173;UBERON:0006601!1.15e-08!173;UBERON:0000349!2.47e-08!5;UBERON:0005910!1.35e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;9.45e-18;4!UBERON:0000923;9.45e-18;4!UBERON:0010316;9.45e-18;4!UBERON:0005291;9.45e-18;4!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0002050;1.71e-14;5!UBERON:0005423;1.71e-14;5!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8 | |||
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| ||
|short_description=p7@MIR4260 | |short_description=p7@MIR4260 | ||
}} | }} |
Latest revision as of 19:26, 24 September 2015
Short description: | p7@MIR4260 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MIR4260_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | -189bp_to_NR_036213_5end |
EntrezGene: | MIR4260 |
HGNC: | 38179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
epidermal cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |
neuroendocrine tumor | 2.19e-12 | 6 |