FFCP PHASE1:Hg19::chr1:116915085..116915100,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=476 | |EntrezGene=476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=799 | |HGNC=799 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_uc010owv.1_5end | |association_with_transcript=81bp_to_uc010owv.1_5end | ||
|cluster_id=chr1:116915085..116915100,+ | |||
|coexpression_cluster_id=C84 | |coexpression_cluster_id=C84 | ||
|description=CAGE_peak_47_at_ATP1A1_5end | |description=CAGE_peak_47_at_ATP1A1_5end | ||
|id=chr1:116915085..116915100,+ | |id=chr1:116915085..116915100,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.28e-09!3 | |ontology_enrichment_celltype=CL:0002541!2.28e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000083;5.14e-23;4!CL:0002541;1.26e-08;3!CL:0002231;1.26e-08;3!CL:0002563;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,4.60e-23,4;CL:0002231,1.40e-08,3;CL:0002541,1.51e-08,3;CL:0002563,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.67e-23;1 | |||
|ontology_enrichment_disease=DOID:1749!9.57e-07!14 | |ontology_enrichment_disease=DOID:1749!9.57e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.49e-23;1!DOID:10165;1.49e-23;1!DOID:1798;1.49e-23;1!DOID:1793;5.14e-23;4!DOID:170;1.05e-15;6!DOID:4074;2.74e-12;2!DOID:4905;2.74e-12;2!DOID:3498;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.34e-23,1;DOID:10165,1.34e-23,1;DOID:1798,1.34e-23,1;DOID:1793,4.60e-23,4;DOID:170,9.74e-16,6;DOID:4074,2.59e-12,2;DOID:4905,2.59e-12,2;DOID:3498,2.59e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.66e-19!14;UBERON:0000158!1.66e-19!14;UBERON:0003124!9.94e-15!7;UBERON:0000478!1.83e-10!24;UBERON:0004175!7.26e-10!25;UBERON:0000476!2.28e-09!3;UBERON:0000920!2.28e-09!3;UBERON:0000995!1.11e-07!21;UBERON:0000064!1.34e-07!219;UBERON:0001987!2.55e-07!4;UBERON:0004340!2.55e-07!4;UBERON:0005795!2.87e-07!22;UBERON:0003975!2.87e-07!22;UBERON:0000305!3.43e-07!7;UBERON:0004923!5.08e-07!57;UBERON:0003127!5.96e-07!2 | |ontology_enrichment_uberon=UBERON:0005631!1.66e-19!14;UBERON:0000158!1.66e-19!14;UBERON:0003124!9.94e-15!7;UBERON:0000478!1.83e-10!24;UBERON:0004175!7.26e-10!25;UBERON:0000476!2.28e-09!3;UBERON:0000920!2.28e-09!3;UBERON:0000995!1.11e-07!21;UBERON:0000064!1.34e-07!219;UBERON:0001987!2.55e-07!4;UBERON:0004340!2.55e-07!4;UBERON:0005795!2.87e-07!22;UBERON:0003975!2.87e-07!22;UBERON:0000305!3.43e-07!7;UBERON:0004923!5.08e-07!57;UBERON:0003127!5.96e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.67e-23;1!UBERON:0001829;2.74e-12;2!UBERON:0001264;8.09e-10;10!UBERON:0003124;1.26e-08;3!UBERON:0000920;1.26e-08;3!UBERON:0001242;8.85e-07;4!UBERON:0001262;8.85e-07;4!UBERON:0004786;8.85e-07;4!UBERON:0004808;8.85e-07;4!UBERON:0001277;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,2.10e-23,1;UBERON:0006298,2.10e-23,1;UBERON:0001829,2.07e-12,2;UBERON:0001264,7.74e-10,10;UBERON:0000920,1.51e-08,3;UBERON:0001242,9.11e-07,4;UBERON:0001262,9.11e-07,4;UBERON:0004786,9.11e-07,4;UBERON:0004808,9.11e-07,4;UBERON:0001277,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,5.21507385225639,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.0979923974143777,0.261177619741208,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.785181748008205,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0,0.135075169236789,0,0.206686796501184,0,0.546974809018219,0,0,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,1.65482611523229,0,0,0.342233301085281,0,0.358611026963382,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0.179515288819544,5.21507385225639,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.0979923974143777,0.261177619741208,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,2.11444506695002,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.785181748008205,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0,0.135075169236789,0,0.206686796501184,0,0.546974809018219,0,0,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,1.65482611523229,0,0,0.342233301085281,0,0.358611026963382,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p47@ATP1A1 | |short_description=p47@ATP1A1 | ||
}} | }} |
Latest revision as of 08:43, 16 September 2015
Short description: | p47@ATP1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_ATP1A1_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 81bp_to_uc010owv.1_5end |
EntrezGene: | ATP1A1 |
HGNC: | 799 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 4.60e-23 | 4 |
epithelial cell of prostate | 1.40e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
intestinal epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 2.10e-23 | 1 |
submandibular gland primordium | 2.10e-23 | 1 |
major salivary gland | 2.07e-12 | 2 |
pancreas | 7.74e-10 | 10 |
egg chorion | 1.51e-08 | 3 |
intestinal mucosa | 9.11e-07 | 4 |
wall of intestine | 9.11e-07 | 4 |
gastrointestinal system mucosa | 9.11e-07 | 4 |
gastrointestinal system epithelium | 9.11e-07 | 4 |
intestinal epithelium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.34e-23 | 1 |
endocrine pancreas cancer | 1.34e-23 | 1 |
pancreatic endocrine carcinoma | 1.34e-23 | 1 |
pancreatic cancer | 4.60e-23 | 4 |
endocrine gland cancer | 9.74e-16 | 6 |
pancreas adenocarcinoma | 2.59e-12 | 2 |
pancreatic carcinoma | 2.59e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.59e-12 | 2 |