FFCP PHASE1:Hg19::chr6:130686742..130686749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154075 | |EntrezGene=154075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21574 | |HGNC=21574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-172bp_to_ENST00000368134,uc003qbx.2_5end | |association_with_transcript=-172bp_to_ENST00000368134,uc003qbx.2_5end | ||
|cluster_id=chr6:130686742..130686749,- | |||
|description=CAGE_peak_9_at_SAMD3_5end | |description=CAGE_peak_9_at_SAMD3_5end | ||
|id=chr6:130686742..130686749,- | |id=chr6:130686742..130686749,- | ||
|ontology_enrichment_celltype=CL:1000306!7.75e-10!4;CL:0002547!7.75e-10!4;CL:0002594!7.92e-10!4;CL:0002334!8.84e-10!12;CL:0000055!1.69e-09!180;CL:0000359!1.83e-07!32;CL:0002579!4.59e-07!3;CL:0000192!4.73e-07!42;CL:0000514!4.73e-07!42 | |ontology_enrichment_celltype=CL:1000306!7.75e-10!4;CL:0002547!7.75e-10!4;CL:0002594!7.92e-10!4;CL:0002334!8.84e-10!12;CL:0000055!1.69e-09!180;CL:0000359!1.83e-07!32;CL:0002579!4.59e-07!3;CL:0000192!4.73e-07!42;CL:0000514!4.73e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000228;5.05e-34;1!CL:0002372;5.05e-34;1!CL:1000306;5.98e-34;4!CL:0002547;5.98e-34;4!CL:0002579;2.59e-12;3!CL:0000056;1.44e-09;4!CL:0000737;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,5.05e-34,1;CL:0002372,5.05e-34,1;CL:1000306,7.07e-34,4;CL:0002547,7.07e-34,4;CL:0002579,3.24e-12,3;CL:0000737,1.44e-09,4;CL:0000515,1.44e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.44e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.97e-08!14 | |ontology_enrichment_disease=DOID:2394!1.97e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!7.75e-10!4;UBERON:0007240!7.75e-10!4;UBERON:0005742!7.75e-10!4;UBERON:0005734!7.75e-10!4;UBERON:0004664!7.75e-10!4;UBERON:0004663!7.75e-10!4;UBERON:0001310!7.92e-10!4;UBERON:0002118!3.60e-07!5;UBERON:0004532!3.60e-07!5 | |ontology_enrichment_uberon=UBERON:0000415!7.75e-10!4;UBERON:0007240!7.75e-10!4;UBERON:0005742!7.75e-10!4;UBERON:0005734!7.75e-10!4;UBERON:0004664!7.75e-10!4;UBERON:0004663!7.75e-10!4;UBERON:0001310!7.92e-10!4;UBERON:0002118!3.60e-07!5;UBERON:0004532!3.60e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.98e-34;4!UBERON:0000415;5.98e-34;4!UBERON:0007240;5.98e-34;4!UBERON:0005742;5.98e-34;4!UBERON:0005734;5.98e-34;4!UBERON:0004664;5.98e-34;4!UBERON:0004663;5.98e-34;4!UBERON:0000947;6.23e-15;21!UBERON:0010191;6.23e-15;21!UBERON:0004573;1.27e-09;33!UBERON:0004571;1.27e-09;33!UBERON:0001637;1.04e-07;42!UBERON:0003509;1.04e-07;42!UBERON:0004572;1.04e-07;42!UBERON:0003688;8.48e-07;6!UBERON:0002358;8.48e-07;6!UBERON:0003684;8.48e-07;6!UBERON:0001178;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.07e-34,4;UBERON:0007240,7.07e-34,4;UBERON:0005742,7.07e-34,4;UBERON:0005734,7.07e-34,4;UBERON:0004664,7.07e-34,4;UBERON:0004663,7.07e-34,4;UBERON:0004797,7.13e-20,7;UBERON:0000947,6.23e-15,21;UBERON:0010191,6.23e-15,21;UBERON:0004573,8.77e-10,33;UBERON:0004571,8.77e-10,33;UBERON:0001637,7.76e-08,42;UBERON:0003509,7.76e-08,42;UBERON:0004572,7.76e-08,42;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
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| ||
|short_description=p9@SAMD3 | |short_description=p9@SAMD3 | ||
}} | }} |
Latest revision as of 17:30, 24 September 2015
Short description: | p9@SAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -172bp_to_ENST00000368134, uc003qbx.2_5end |
EntrezGene: | SAMD3 |
HGNC: | 21574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 5.05e-34 | 1 |
myotube | 5.05e-34 | 1 |
fibroblast of tunica adventitia of artery | 7.07e-34 | 4 |
fibroblast of the aortic adventitia | 7.07e-34 | 4 |
omentum preadipocyte | 3.24e-12 | 3 |
striated muscle cell | 1.44e-09 | 4 |
skeletal muscle myoblast | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.07e-34 | 4 |
tunica adventitia of artery | 7.07e-34 | 4 |
adventitia | 7.07e-34 | 4 |
tunica adventitia of blood vessel | 7.07e-34 | 4 |
aorta tunica adventitia | 7.07e-34 | 4 |
aorta wall | 7.07e-34 | 4 |
blood vessel layer | 7.13e-20 | 7 |
aorta | 6.23e-15 | 21 |
aortic system | 6.23e-15 | 21 |
systemic artery | 8.77e-10 | 33 |
systemic arterial system | 8.77e-10 | 33 |
artery | 7.76e-08 | 42 |
arterial blood vessel | 7.76e-08 | 42 |
arterial system | 7.76e-08 | 42 |
omentum | 9.49e-07 | 6 |
peritoneum | 9.49e-07 | 6 |
abdominal cavity | 9.49e-07 | 6 |
visceral peritoneum | 9.49e-07 | 6 |