FFCP PHASE1:Hg19::chr13:77463947..77463954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:77463947..77463954,- | |||
|description=CAGE_peak_at_chr13:77463947..77463954,- | |description=CAGE_peak_at_chr13:77463947..77463954,- | ||
|id=chr13:77463947..77463954,- | |id=chr13:77463947..77463954,- | ||
|ontology_enrichment_celltype=CL:0000066!6.54e-07!254 | |ontology_enrichment_celltype=CL:0000066!6.54e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1001319;2.93e-23;1!CL:1000600;2.93e-23;1!CL:0000307;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.10e-23,1;CL:1000600,2.10e-23,1;CL:0000076,5.90e-09,63;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.48e-12;2!UBERON:0010056;1.48e-12;2!CL:0000377;1.17e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!4.04e-19!14;DOID:305!3.31e-12!106;DOID:162!1.07e-08!235;DOID:0050687!1.78e-08!143;DOID:14566!2.39e-08!239 | |ontology_enrichment_disease=DOID:1749!4.04e-19!14;DOID:305!3.31e-12!106;DOID:162!1.07e-08!235;DOID:0050687!1.78e-08!143;DOID:14566!2.39e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.39e-25;14!DOID:1909;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.19e-25,14;DOID:1909,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.04e-08!4;UBERON:0004785!2.04e-08!4;UBERON:0003729!8.42e-07!5 | |ontology_enrichment_uberon=UBERON:0003343!2.04e-08!4;UBERON:0004785!2.04e-08!4;UBERON:0003729!8.42e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;2.93e-23;1!UBERON:0007195;2.93e-23;1!UBERON:0001256;2.93e-23;1!UBERON:0001259;2.93e-23;1!UBERON:0001255;2.45e-12;2!UBERON:0001556;2.45e-12;2!UBERON:0001723;8.31e-09;3!UBERON:0001033;8.31e-09;3!UBERON:0003343;6.49e-07;4!UBERON:0004785;6.49e-07;4!UBERON:0001003;8.09e-07;15!UBERON:0007376;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.10e-23,1;UBERON:0001256,2.10e-23,1;UBERON:0001259,2.10e-23,1;UBERON:0007195,4.10e-23,1;UBERON:0001255,2.07e-12,2;UBERON:0001556,2.07e-12,2;UBERON:0001723,8.31e-09,3;UBERON:0001033,8.31e-09,3;UBERON:0010056,8.31e-09,3;UBERON:0003343,6.50e-07,4;UBERON:0004785,6.50e-07,4;UBERON:0001003,8.09e-07,15;UBERON:0007376,8.09e-07,15;UBERON:0007383,8.09e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.716468181622786,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,1.0241410345695,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.587954384486266,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0.124980407962107,1.21319294033318,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.751288044986092,0,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,3.46576998451015,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,1.30245229777559,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:77463947..77463954,- | |short_description=p@chr13:77463947..77463954,- | ||
}} | }} |
Latest revision as of 17:10, 24 July 2015
Short description: | p@chr13:77463947..77463954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:77463947..77463954, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.10e-23 | 1 |
lower urinary tract cell | 2.10e-23 | 1 |
squamous epithelial cell | 5.90e-09 | 63 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.10e-23 | 1 |
wall of urinary bladder | 2.10e-23 | 1 |
mucosa of urinary bladder | 2.10e-23 | 1 |
stroma of bone marrow | 4.10e-23 | 1 |
urinary bladder | 2.07e-12 | 2 |
lower urinary tract | 2.07e-12 | 2 |
tongue | 8.31e-09 | 3 |
gustatory system | 8.31e-09 | 3 |
future tongue | 8.31e-09 | 3 |
mucosa of oral region | 6.50e-07 | 4 |
respiratory system mucosa | 6.50e-07 | 4 |
skin epidermis | 8.09e-07 | 15 |
outer epithelium | 8.09e-07 | 15 |
enveloping layer of ectoderm | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.19e-25 | 14 |
melanoma | 2.32e-12 | 2 |