FFCP PHASE1:Hg19::chr15:75639675..75639680,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79661 | |EntrezGene=79661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18448 | |HGNC=18448 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-298bp_to_uc002bae.2_5end | |association_with_transcript=-298bp_to_uc002bae.2_5end | ||
|cluster_id=chr15:75639675..75639680,+ | |||
|description=CAGE_peak_13_at_NEIL1_5end | |description=CAGE_peak_13_at_NEIL1_5end | ||
|id=chr15:75639675..75639680,+ | |id=chr15:75639675..75639680,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.97e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.56e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002020!4.30e-18!34;UBERON:0003528!4.30e-18!34;UBERON:0001869!5.01e-17!32;UBERON:0002780!7.25e-16!41;UBERON:0001890!7.25e-16!41;UBERON:0006240!7.25e-16!41;UBERON:0001893!8.52e-16!34;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0003080!2.22e-15!42;UBERON:0002619!5.43e-15!22;UBERON:0002791!1.59e-14!33;UBERON:0001950!4.81e-14!20;UBERON:0007023!5.22e-14!115;UBERON:0002616!1.67e-13!59;UBERON:0000956!6.80e-13!25;UBERON:0000203!6.80e-13!25;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0001017!3.96e-10!82;UBERON:0005743!2.12e-09!86;UBERON:0003056!3.45e-09!61;UBERON:0000073!7.69e-09!94;UBERON:0001016!7.69e-09!94;UBERON:0002346!8.58e-09!90;UBERON:0003075!1.55e-08!86;UBERON:0007284!1.55e-08!86;UBERON:0000153!4.36e-07!129;UBERON:0007811!4.36e-07!129;UBERON:0002308!9.77e-07!9;UBERON:0000125!9.77e-07!9 | |ontology_enrichment_uberon=UBERON:0002020!4.30e-18!34;UBERON:0003528!4.30e-18!34;UBERON:0001869!5.01e-17!32;UBERON:0002780!7.25e-16!41;UBERON:0001890!7.25e-16!41;UBERON:0006240!7.25e-16!41;UBERON:0001893!8.52e-16!34;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0003080!2.22e-15!42;UBERON:0002619!5.43e-15!22;UBERON:0002791!1.59e-14!33;UBERON:0001950!4.81e-14!20;UBERON:0007023!5.22e-14!115;UBERON:0002616!1.67e-13!59;UBERON:0000956!6.80e-13!25;UBERON:0000203!6.80e-13!25;UBERON:0000955!1.53e-10!69;UBERON:0006238!1.53e-10!69;UBERON:0001017!3.96e-10!82;UBERON:0005743!2.12e-09!86;UBERON:0003056!3.45e-09!61;UBERON:0000073!7.69e-09!94;UBERON:0001016!7.69e-09!94;UBERON:0002346!8.58e-09!90;UBERON:0003075!1.55e-08!86;UBERON:0007284!1.55e-08!86;UBERON:0000153!4.36e-07!129;UBERON:0007811!4.36e-07!129;UBERON:0002308!9.77e-07!9;UBERON:0000125!9.77e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.40e-14,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08454080812422,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.321146125482298,1.41696576325585,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.193766729508018,0.744896571550295,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08454080812422,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0.415440338029185,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.321146125482298,1.41696576325585,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.459474497674225,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.193766729508018,0.744896571550295,0,0,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p13@NEIL1 | |short_description=p13@NEIL1 | ||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p13@NEIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NEIL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -298bp_to_uc002bae.2_5end |
EntrezGene: | NEIL1 |
HGNC: | 18448 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.40e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.56e-08 | 10 |