FFCP PHASE1:Hg19::chr1:218614908..218614923,+: Difference between revisions
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|id=chr1:218614908..218614923,+
|short_description=p@chr1:218614908..218614923,+
|description=CAGE_peak_at_chr1:218614908..218614923,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:218614908..218614923,+ | |||
|coexpression_cluster_id=C3939 | |||
|description=CAGE_peak_at_chr1:218614908..218614923,+ | |||
|id=chr1:218614908..218614923,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;8.00e-16;3!CL:0000067;8.00e-16;3!CL:0005012;8.00e-16;3!CL:0002304;8.00e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.96e-16,3;CL:0000067,6.96e-16,3;CL:0005012,6.96e-16,3;CL:0002304,6.96e-16,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.10e-11!123;UBERON:0000153!3.17e-10!129;UBERON:0007811!3.17e-10!129;UBERON:0000119!7.50e-09!312;UBERON:0000481!1.36e-08!347;UBERON:0000483!3.38e-08!309;UBERON:0000955!1.89e-07!69;UBERON:0006238!1.89e-07!69;UBERON:0007625!5.20e-07!11;UBERON:0002616!7.55e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.60e-20;4!UBERON:0001778;8.00e-16;3!UBERON:0001775;8.00e-16;3!UBERON:0007625;8.76e-16;11!UBERON:0002203;1.71e-13;6!UBERON:0001768;1.71e-13;6!UBERON:0002200;1.71e-13;6!UBERON:0001801;2.87e-12;14!UBERON:0006876;5.13e-11;11!UBERON:0000019;7.14e-09;19!UBERON:0000047;7.14e-09;19!UBERON:0004088;7.14e-09;19!UBERON:0010230;7.14e-09;19!UBERON:0010371;8.36e-09;31!UBERON:0000970;2.14e-08;20!UBERON:0002104;5.76e-08;21!UBERON:0001456;5.76e-08;21!UBERON:0002114;3.00e-07;2!UBERON:0000020;3.23e-07;23!UBERON:0001032;6.86e-07;24!UBERON:0004456;6.86e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,4.22e-20,4;UBERON:0001778,6.96e-16,3;UBERON:0001775,6.96e-16,3;UBERON:0007625,7.38e-16,11;UBERON:0002203,1.90e-13,6;UBERON:0001768,1.90e-13,6;UBERON:0002200,1.90e-13,6;UBERON:0001801,2.51e-12,14;UBERON:0006876,6.81e-11,11;UBERON:0000019,1.95e-08,20;UBERON:0000047,1.95e-08,20;UBERON:0010312,1.95e-08,20;UBERON:0004088,1.95e-08,20;UBERON:0010230,1.95e-08,20;UBERON:0003072,1.95e-08,20;UBERON:0004128,1.95e-08,20;UBERON:0003071,1.95e-08,20;UBERON:0000970,5.29e-08,21;UBERON:0002104,5.29e-08,21;UBERON:0001456,1.31e-07,22;UBERON:0002114,2.19e-07,2;UBERON:0000020,6.37e-07,24;UBERON:0001032,6.37e-07,24;UBERON:0004456,6.37e-07,24 | |||
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| ||
|short_description=p@chr1:218614908..218614923,+ | |||
}} | }} |
Latest revision as of 03:58, 28 July 2015
Short description: | p@chr1:218614908..218614923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:218614908..218614923, + |
Coexpression cluster: | C3939_Lens_Ciliary_anaplastic_mesothelioma_osteoclastoma_pharyngeal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.96e-16 | 3 |
ciliated epithelial cell | 6.96e-16 | 3 |
multi-ciliated epithelial cell | 6.96e-16 | 3 |
non-pigmented ciliary epithelial cell | 6.96e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 4.22e-20 | 4 |
ciliary epithelium | 6.96e-16 | 3 |
ciliary body | 6.96e-16 | 3 |
pigment epithelium of eye | 7.38e-16 | 11 |
vasculature of eye | 1.90e-13 | 6 |
uvea | 1.90e-13 | 6 |
vasculature of head | 1.90e-13 | 6 |
anterior segment of eyeball | 2.51e-12 | 14 |
vasculature of organ | 6.81e-11 | 11 |
camera-type eye | 1.95e-08 | 20 |
simple eye | 1.95e-08 | 20 |
immature eye | 1.95e-08 | 20 |
ocular region | 1.95e-08 | 20 |
eyeball of camera-type eye | 1.95e-08 | 20 |
optic cup | 1.95e-08 | 20 |
optic vesicle | 1.95e-08 | 20 |
eye primordium | 1.95e-08 | 20 |
eye | 5.29e-08 | 21 |
visual system | 5.29e-08 | 21 |
face | 1.31e-07 | 22 |
duodenum | 2.19e-07 | 2 |
sense organ | 6.37e-07 | 24 |
sensory system | 6.37e-07 | 24 |
entire sense organ system | 6.37e-07 | 24 |