FFCP PHASE1:Hg19::chr15:39888305..39888312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888305..39888312,+ | |||
|coexpression_cluster_id=C142 | |coexpression_cluster_id=C142 | ||
|description=CAGE_peak_at_chr15:39888305..39888312,+ | |description=CAGE_peak_at_chr15:39888305..39888312,+ | ||
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|ontology_enrichment_celltype=CL:0000057!6.05e-13!75;CL:0002371!8.71e-11!591;CL:0000144!4.49e-09!625;CL:0002139!1.32e-08!24;CL:0002620!1.30e-07!23;CL:0000548!1.81e-07!679;CL:0000004!1.81e-07!679;CL:0000255!1.81e-07!679;CL:0000055!3.02e-07!180;CL:0000012!3.17e-07!682;CL:0002334!4.39e-07!12 | |ontology_enrichment_celltype=CL:0000057!6.05e-13!75;CL:0002371!8.71e-11!591;CL:0000144!4.49e-09!625;CL:0002139!1.32e-08!24;CL:0002620!1.30e-07!23;CL:0000548!1.81e-07!679;CL:0000004!1.81e-07!679;CL:0000255!1.81e-07!679;CL:0000055!3.02e-07!180;CL:0000012!3.17e-07!682;CL:0002334!4.39e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002580;8.52e-15;3!CL:0002334;7.97e-14;12!CL:0002617;8.12e-11;2!CL:0002559;4.62e-09;5!CL:0000197;8.49e-08;6!CL:0000098;8.49e-08;6!CL:0002167;8.49e-08;6!CL:0002579;1.78e-07;3!CL:0000346;1.99e-07;3!CL:1000428;1.99e-07;3 | |ontology_enrichment_celltype_v019=CL:0002580;8.52e-15;3!CL:0002334;7.97e-14;12!CL:0002617;8.12e-11;2!CL:0002559;4.62e-09;5!CL:0000197;8.49e-08;6!CL:0000098;8.49e-08;6!CL:0002167;8.49e-08;6!CL:0002579;1.78e-07;3!CL:0000346;1.99e-07;3!CL:1000428;1.99e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.31e-15,3;CL:0002334,6.60e-14,12;CL:0000057,1.52e-13,76;CL:0002617,8.97e-11,2;CL:0002559,4.20e-09,5;CL:0000197,7.49e-08,6;CL:0000098,7.49e-08,6;CL:0002167,7.49e-08,6;CL:0000346,1.96e-07,3;CL:1000428,1.96e-07,3;CL:0002579,2.02e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.12e-12!69;UBERON:0001981!7.52e-11!60;UBERON:0007500!7.52e-11!60;UBERON:0004537!7.52e-11!60;UBERON:0006965!7.52e-11!60;UBERON:0004872!2.40e-10!84;UBERON:0002049!4.90e-10!79;UBERON:0007798!4.90e-10!79;UBERON:0003914!5.10e-08!118;UBERON:0003102!7.76e-08!95;UBERON:0001637!9.16e-08!42;UBERON:0003509!9.16e-08!42;UBERON:0004572!9.16e-08!42;UBERON:0002097!1.32e-07!40;UBERON:0001009!1.87e-07!113;UBERON:0004535!1.89e-07!110;UBERON:0003688!2.70e-07!6;UBERON:0002358!2.70e-07!6;UBERON:0003684!2.70e-07!6;UBERON:0001178!2.70e-07!6;UBERON:0002199!6.43e-07!45;UBERON:0002416!6.43e-07!45;UBERON:0004573!7.48e-07!33;UBERON:0004571!7.48e-07!33 | |ontology_enrichment_uberon=UBERON:0000055!2.12e-12!69;UBERON:0001981!7.52e-11!60;UBERON:0007500!7.52e-11!60;UBERON:0004537!7.52e-11!60;UBERON:0006965!7.52e-11!60;UBERON:0004872!2.40e-10!84;UBERON:0002049!4.90e-10!79;UBERON:0007798!4.90e-10!79;UBERON:0003914!5.10e-08!118;UBERON:0003102!7.76e-08!95;UBERON:0001637!9.16e-08!42;UBERON:0003509!9.16e-08!42;UBERON:0004572!9.16e-08!42;UBERON:0002097!1.32e-07!40;UBERON:0001009!1.87e-07!113;UBERON:0004535!1.89e-07!110;UBERON:0003688!2.70e-07!6;UBERON:0002358!2.70e-07!6;UBERON:0003684!2.70e-07!6;UBERON:0001178!2.70e-07!6;UBERON:0002199!6.43e-07!45;UBERON:0002416!6.43e-07!45;UBERON:0004573!7.48e-07!33;UBERON:0004571!7.48e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;8.51e-12;10!UBERON:0001443;1.07e-10;11!UBERON:0005406;1.44e-10;2!UBERON:0002073;4.62e-09;5!UBERON:0003688;5.66e-08;6!UBERON:0002358;5.66e-08;6!UBERON:0003684;5.66e-08;6!UBERON:0001178;5.66e-08;6!UBERON:0000412;1.99e-07;3!UBERON:0001992;1.99e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000310;8.51e-12;10!UBERON:0001443;1.07e-10;11!UBERON:0005406;1.44e-10;2!UBERON:0002073;4.62e-09;5!UBERON:0003688;5.66e-08;6!UBERON:0002358;5.66e-08;6!UBERON:0003684;5.66e-08;6!UBERON:0001178;5.66e-08;6!UBERON:0000412;1.99e-07;3!UBERON:0001992;1.99e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.71e-12,10;UBERON:0001443,9.79e-11,11;UBERON:0005406,9.87e-11,2;UBERON:0002073,4.20e-09,5;UBERON:0005086,4.20e-09,5;UBERON:0003688,6.23e-08,6;UBERON:0002358,6.23e-08,6;UBERON:0003684,6.23e-08,6;UBERON:0001178,6.23e-08,6;UBERON:0000412,1.96e-07,3;UBERON:0001992,1.96e-07,3 | |||
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| ||
|short_description=p@chr15:39888305..39888312,+ | |short_description=p@chr15:39888305..39888312,+ | ||
}} | }} |
Latest revision as of 01:21, 25 July 2015
Short description: | p@chr15:39888305..39888312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888305..39888312, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.31e-15 | 3 |
preadipocyte | 6.60e-14 | 12 |
fibroblast | 1.52e-13 | 76 |
adipocyte of breast | 8.97e-11 | 2 |
hair follicle cell | 4.20e-09 | 5 |
receptor cell | 7.49e-08 | 6 |
sensory epithelial cell | 7.49e-08 | 6 |
olfactory epithelial cell | 7.49e-08 | 6 |
hair follicle dermal papilla cell | 1.96e-07 | 3 |
stem cell of epidermis | 1.96e-07 | 3 |
omentum preadipocyte | 2.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 7.71e-12 | 10 |
chest | 9.79e-11 | 11 |
perirenal fat | 9.87e-11 | 2 |
hair follicle | 4.20e-09 | 5 |
hair follicle placode | 4.20e-09 | 5 |
omentum | 6.23e-08 | 6 |
peritoneum | 6.23e-08 | 6 |
abdominal cavity | 6.23e-08 | 6 |
visceral peritoneum | 6.23e-08 | 6 |
dermal papilla | 1.96e-07 | 3 |
papillary layer of dermis | 1.96e-07 | 3 |