FFCP PHASE1:Hg19::chr6:21594252..21594285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6659 | |EntrezGene=6659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11200 | |HGNC=11200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=181bp_to_ENST00000543472_5end | |association_with_transcript=181bp_to_ENST00000543472_5end | ||
|cluster_id=chr6:21594252..21594285,+ | |||
|coexpression_cluster_id=C214 | |coexpression_cluster_id=C214 | ||
|description=CAGE_peak_11_at_SOX4_5end | |description=CAGE_peak_11_at_SOX4_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.15e-14!254;CL:0000047!7.87e-07!8 | |ontology_enrichment_celltype=CL:0000066!3.15e-14!254;CL:0000047!7.87e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.79e-11;6!CL:0000404;3.79e-11;6 | |ontology_enrichment_celltype_v019=CL:0000540;3.79e-11;6!CL:0000404;3.79e-11;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.82e-16,8;CL:0000540,2.30e-11,6;CL:0000031,2.30e-11,6;CL:0000404,2.30e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.79e-11;6 | |ontology_enrichment_development_v019=CL:0000031;3.79e-11;6 | ||
|ontology_enrichment_disease=DOID:162!5.17e-14!235;DOID:14566!9.95e-14!239;DOID:0050687!2.80e-11!143;DOID:305!1.53e-10!106 | |ontology_enrichment_disease=DOID:162!5.17e-14!235;DOID:14566!9.95e-14!239;DOID:0050687!2.80e-11!143;DOID:305!1.53e-10!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.41e-09;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;2.41e-09;49 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0,0,0,0,0.791300934685361,0.247532705920093,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0.547497700291537,0.502170558379211,0.382067028739756,0.328402357799783,0.472264687882075,0,0,0.309632246632152,0,0.30120591877825,1.47901604066715,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0,0,1.29096936716765,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0,0,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.579386075843295,0.795285947051099,0,0.0945348171640679,1.10864698731282,0.790513071238134,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.398873881556595,0.476981248610684,0.571994910780128,1.11437250398869,0,0.860234595106124,0,0,0,0.550236083880135,0,0.775250277507987,0.71153252537342,1.33888245105868,2.41697590265488,1.52054421143703,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0.673588117878509,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0.25326102332916,0,0.573673241497627,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0.635795703478686,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,1.46368447355514,0.265059536642971,1.2781333715647,0.829288440122964,1.7662459561294,0.36497735907583,0,0,0,0,0,0.473227200159376,1.34867752062481,1.20505514941741,0.772057809126758,1.52515610864684,0.71181185733329,0.943819157121151,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,2.6487785964879,0.614942192715568,0.171567810298526,0.658501712451753,0,0.201057944823262,0.462942225792648,0,0,2.88662684050547,0.579652024875384,0,1.01056513432752,0.925971025153221,1.52203321787679,3.1608175918371,2.57545848628462,0,0.702012795417713,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0,0,0.571652865261156,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,2.03275699377971,15.6167824629146,35.571285387774,16.9191427987692,37.6383863475366,0,0,0,0.49076596687656,0.500170521059677,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0.647142602455851,0,0,0,0,0.744323423456331,0.306923946576125,0.841980283299221,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0.483437798366489,1.60405176242628,0.460404944679482,0,0,0.786746489756545,1.35359883872224,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,2.19766715564024,1.48517099857058,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0.576570202095319,0.127612712494584,0.6069466851333,0.464845549297286,0,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,2.15252686335615,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,1.298422916788,0.995985806877798,1.59426272728822,0.997896857164083,0,1.48171507906718,1.62310970137278,0.280797178113459,2.05411211129873,0,0,0.677167111206413,0.802940375518498,0.605399121573143,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0.561421621224659,0,2.79129200023881,0.111443384277478,1.13654458722565,0,0.296964680832639,0,0,0,0.111308705022906,0,0.63337622438398,0,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.0898683511473268,1.25314822272926,0,0,0,0,0,0,5.98841394003583,0.7812832832557,0.174919999992391,0,0.227586896570999,0.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| ||
|short_description=p11@SOX4 | |short_description=p11@SOX4 | ||
}} | }} |
Latest revision as of 03:49, 17 September 2015
Short description: | p11@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SOX4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 181bp_to_ENST00000543472_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.82e-16 | 8 |
neuron | 2.30e-11 | 6 |
neuroblast | 2.30e-11 | 6 |
electrically signaling cell | 2.30e-11 | 6 |