FFCP PHASE1:Hg19::chr1:156542366..156542377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128239 | |EntrezGene=128239 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20669 | |HGNC=20669 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2E2,Q86VI3 | |UniProt=F2Z2E2,Q86VI3 | ||
|association_with_transcript=18bp_to_ENST00000491900,NM_178229,uc001fpf.2,uc009wsb.1_5end | |association_with_transcript=18bp_to_ENST00000491900,NM_178229,uc001fpf.2,uc009wsb.1_5end | ||
|cluster_id=chr1:156542366..156542377,- | |||
|description=CAGE_peak_2_at_IQGAP3_5end | |description=CAGE_peak_2_at_IQGAP3_5end | ||
|id=chr1:156542366..156542377,- | |id=chr1:156542366..156542377,- | ||
|ontology_enrichment_celltype=CL:0000548!6.79e-17!679;CL:0000004!6.79e-17!679;CL:0000255!6.79e-17!679;CL:0000012!1.74e-16!682;CL:0000066!2.81e-14!254;CL:0000055!5.30e-14!180;CL:0002321!3.01e-10!248;CL:0000220!7.06e-10!246;CL:0000003!2.12e-09!722;CL:0000057!5.13e-09!75;CL:0000333!7.71e-09!41;CL:0000095!2.68e-08!17;CL:0000123!2.68e-08!17;CL:0002319!6.62e-08!25;CL:0000243!1.00e-07!15;CL:0000125!1.00e-07!15;CL:0000030!1.00e-07!15;CL:0000339!1.00e-07!15;CL:0000133!1.08e-07!59;CL:0000221!2.13e-07!71;CL:0000144!4.89e-07!625 | |ontology_enrichment_celltype=CL:0000548!6.79e-17!679;CL:0000004!6.79e-17!679;CL:0000255!6.79e-17!679;CL:0000012!1.74e-16!682;CL:0000066!2.81e-14!254;CL:0000055!5.30e-14!180;CL:0002321!3.01e-10!248;CL:0000220!7.06e-10!246;CL:0000003!2.12e-09!722;CL:0000057!5.13e-09!75;CL:0000333!7.71e-09!41;CL:0000095!2.68e-08!17;CL:0000123!2.68e-08!17;CL:0002319!6.62e-08!25;CL:0000243!1.00e-07!15;CL:0000125!1.00e-07!15;CL:0000030!1.00e-07!15;CL:0000339!1.00e-07!15;CL:0000133!1.08e-07!59;CL:0000221!2.13e-07!71;CL:0000144!4.89e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.20e-09;23!CL:0000095;2.55e-08;17!CL:0000243;2.79e-08;15!CL:0000125;2.79e-08;15!CL:1000497;5.24e-08;17!CL:0002518;5.24e-08;17!CL:1000449;5.37e-08;15!CL:0002319;1.22e-07;25 | |ontology_enrichment_celltype_v019=CL:0002620;3.20e-09;23!CL:0000095;2.55e-08;17!CL:0000243;2.79e-08;15!CL:0000125;2.79e-08;15!CL:1000497;5.24e-08;17!CL:0002518;5.24e-08;17!CL:1000449;5.37e-08;15!CL:0002319;1.22e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.00e-09,76;CL:0002620,6.92e-09,23;CL:0000243,9.28e-09,15;CL:0000125,9.28e-09,15;CL:0000030,9.28e-09,15;CL:0000339,9.28e-09,15;CL:0000095,1.11e-08,17;CL:0000123,1.11e-08,17;CL:1000497,2.01e-08,17;CL:0002518,2.01e-08,17;CL:1000449,2.83e-08,15;CL:0000333,9.10e-08,41;CL:0002319,1.37e-07,25;CL:0002681,6.04e-07,12;CL:0002584,6.04e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000339;2.79e-08;15 | |ontology_enrichment_development_v019=CL:0000339;2.79e-08;15 | ||
|ontology_enrichment_disease=DOID:162!7.63e-24!235;DOID:14566!1.12e-23!239;DOID:0050687!7.31e-18!143;DOID:305!1.42e-11!106;DOID:0050686!3.57e-09!137 | |ontology_enrichment_disease=DOID:162!7.63e-24!235;DOID:14566!1.12e-23!239;DOID:0050687!7.31e-18!143;DOID:305!1.42e-11!106;DOID:0050686!3.57e-09!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.14e-08,143;DOID:162,1.64e-07,235;DOID:14566,1.89e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.37e-08;15!UBERON:0004819;5.37e-08;15!UBERON:0001285;5.37e-08;15!UBERON:0007684;5.37e-08;15!UBERON:0000353;8.73e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;5.37e-08;15!UBERON:0004819;5.37e-08;15!UBERON:0001285;5.37e-08;15!UBERON:0007684;5.37e-08;15!UBERON:0000353;8.73e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.83e-08,15;UBERON:0009773,2.83e-08,15;UBERON:0001231,2.83e-08,15;UBERON:0001285,2.83e-08,15;UBERON:0007684,2.83e-08,15;UBERON:0004208,2.83e-08,15;UBERON:0000353,4.53e-08,15;UBERON:0006555,1.43e-07,16;UBERON:0004819,1.43e-07,16;UBERON:0001225,6.04e-07,12;UBERON:0008987,6.04e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,3.48900583986214,2.18441372130172,0.791300934685361,0.123766352960047,0,0,0,0,0,3.32426856807327,1.63200552995402,0.626909442956176,2.0036519099174,1.23186982565596,1.50651167513763,0.764134057479513,0.246301768349837,0.472264687882075,0,0,0,0,1.50602959389125,0.369754010166788,1.08454080812422,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,0,0.289693037921647,0,0,1.51255707462509,0.443458794925128,0.263504357079378,0.196468613246569,0.728590576585084,1.11235332835329,0,0,0,0,0,0,1.98762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,1.37559020970034,1.25396979922086,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,1.60739510911344,0.898117490504679,0.788280363383256,3.06633274931766,0,0.549605231791222,0,0,1.3082821564276,0,0.633152558322899,0.132409180813219,4.01571269048339,2.12801029319014,0,0,0,0.622422070799533,0.404132016209064,1.14423332179421,0.605429710579726,0,1.64025002283658,0.624320153660641,1.1409436430889,0.298897361103602,2.23125547423153,1.78060238804945,2.38766371393822,1.02077085627447,1.35117749042945,0.206651562351531,0,0.494533858557114,1.82032272387605,0,1.68336113954066,2.37725187756732,0.277064115484183,1.75591048352335,2.14541457059314,0.751190294532984,0.794025282120147,4.12596162084383,0,0,3.00091096084402,0.515262646192195,1.03056216018252,0.18611685633159,4.38818463827292,1.16924406193438,3.5340728394176,0.184099797284599,0.161646056818812,2.4850671476163,1.30977727695932,1.3564847384839,0,0.545492241181669,0,0.975789649036763,0.927708378250397,0.69716365721711,1.14027160516907,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,1.18306800039844,0.168584690078102,0.241011029883482,0.882351781859152,0.217879444092406,0.474541238222193,0.269662616320329,0.588664395376038,0.769494313892781,3.69077727312324,1.40241773803446,0.4115740113314,0,0,0,0,0.882926198829301,0.860919069801795,0.514703430895577,0.109750285408626,0,1.10581869652794,0.555530670951178,2.6064664424826,1.03993478527958,0,0.231860809950154,0.234817388471643,0,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.16798212819886,0.283550194484773,1.61205340865127,0.871901815541886,1.53353071666084,0.492663237895943,0.088048434013226,0,0,0,1.07946420296687,0.763976851116555,1.17217447210047,0,0.719792448923265,0.300343057843917,0,3.02753927732474,3.05172048183296,0.5867062865676,0.129271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,2.57207374262142,0,1.8649552531127,0.142977993658148,0,0.823240336780769,0.325736184293735,0.355391948742546,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0.895304816199478,0.224170287987055,0,0,0,1.01637849688985,1.30139853857622,0,1.00509759200609,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0.664225598535437,1.47495334833363,0.868836144680828,0.979005787313703,0.343143423810856,0,0,0,1.21251028578504,0,0.907170879989041,0,0.153461973288062,0,0,0.511707249066704,0,1.48418066444991,1.23367755042124,0.532685175939381,0.657017248110473,0.519254429183621,1.27831416305955,0.241718899183244,0.200506470303285,0,0.459257792658427,1.0925470080403,0.131124414959424,1.35359883872224,0.924184045252977,2.35304930753057,2.92278449306521,0.422206515571503,2.27466768141793,1.02056223165909,1.29549549661284,0,1.62567862526312,1.50506932156456,2.54876273045038,0.831076008928724,1.79099803777743,0.657779629937804,0.784306353074702,1.02580050046556,0.984043937099117,0,0.103041011647722,1.55668090191184,0.82509499920588,1.14853107599234,0.650060246036521,0,0.48335359146061,0.924291702687866,0.460511024178389,0.827019434907183,0.751941714077915,0.870100163485371,0.681813019328807,0.267096106940212,0,0,1.14851441245126,0,0,0.31481234683064,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,1.116475108079,0.949138274156178,0,1.02359116524534,0,0.318203247925937,0,0,0,0.942499218765491,0.202182481573316,0,1.26377536871694,1.46290121726877,0,0,1.63799893689583,0.424216295861138,0,1.65409603063837,0,0,0,0,0.405820753925408,0.30982349809975,1.12678241012897,1.14729081763241,0.196498082026242,1.07001315444375,1.77380532035299,0.211107635297664,0,3.03578539012572,2.0996083214699,0.48111056362756,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0.980160863924127,1.11481905075431,1.87549976869378,0.355709216742071,0.159426272728822,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0.684704037099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| ||
|short_description=p2@IQGAP3 | |short_description=p2@IQGAP3 | ||
}} | }} |
Latest revision as of 16:26, 17 September 2015
Short description: | p2@IQGAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IQGAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000491900, NM_178229, uc001fpf.2, uc009wsb.1_5end |
EntrezGene: | IQGAP3 |
HGNC: | 20669 |
UniProt: | F2Z2E2Q86VI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.00e-09 | 76 |
skin fibroblast | 6.92e-09 | 23 |
glial cell (sensu Vertebrata) | 9.28e-09 | 15 |
glial cell | 9.28e-09 | 15 |
glioblast | 9.28e-09 | 15 |
glioblast (sensu Vertebrata) | 9.28e-09 | 15 |
neuron associated cell | 1.11e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.11e-08 | 17 |
kidney cell | 2.01e-08 | 17 |
kidney epithelial cell | 2.01e-08 | 17 |
epithelial cell of nephron | 2.83e-08 | 15 |
migratory neural crest cell | 9.10e-08 | 41 |
neural cell | 1.37e-07 | 25 |
kidney cortical cell | 6.04e-07 | 12 |
renal cortical epithelial cell | 6.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.83e-08 | 15 |
renal tubule | 2.83e-08 | 15 |
nephron tubule | 2.83e-08 | 15 |
nephron | 2.83e-08 | 15 |
uriniferous tubule | 2.83e-08 | 15 |
nephrogenic mesenchyme | 2.83e-08 | 15 |
parenchyma | 4.53e-08 | 15 |
excretory tube | 1.43e-07 | 16 |
kidney epithelium | 1.43e-07 | 16 |
cortex of kidney | 6.04e-07 | 12 |
renal parenchyma | 6.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.14e-08 | 143 |
cancer | 1.64e-07 | 235 |
disease of cellular proliferation | 1.89e-07 | 239 |