FFCP PHASE1:Hg19::chr5:160356450..160356459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:160356450..160356459,- | |||
|coexpression_cluster_id=C263 | |coexpression_cluster_id=C263 | ||
|description=CAGE_peak_at_chr5:160356450..160356459,- | |description=CAGE_peak_at_chr5:160356450..160356459,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002336!4.34e-07!1;CL:0002261!4.34e-07!1;CL:0002170!4.34e-07!1 | |ontology_enrichment_celltype=CL:0002336!4.34e-07!1;CL:0002261!4.34e-07!1;CL:0002170!4.34e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002623;5.96e-34;3!CL:0000622;5.15e-21;5!CL:0000154;9.07e-18;6!CL:0000150;2.45e-12;9 | |ontology_enrichment_celltype_v019=CL:0002623;5.96e-34;3!CL:0000622;5.15e-21;5!CL:0000154;9.07e-18;6!CL:0000150;2.45e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.96e-34,3;CL:0000622,5.15e-21,5;CL:0000154,9.07e-18,6;CL:0000150,2.45e-12,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!8.00e-08!1;DOID:3149!8.00e-08!1;DOID:1799!1.83e-07!1;DOID:10165!1.83e-07!1;DOID:1798!1.83e-07!1 | |ontology_enrichment_disease=DOID:3151!8.00e-08!1;DOID:3149!8.00e-08!1;DOID:1799!1.83e-07!1;DOID:10165!1.83e-07!1;DOID:1798!1.83e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | |ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0006562!1.02e-19!11;UBERON:0001042!1.90e-15!10;UBERON:0009145!1.90e-15!10;UBERON:0004921!1.95e-11!129;UBERON:0004185!1.95e-11!129;UBERON:0001007!2.04e-11!155;UBERON:0001555!2.04e-11!155;UBERON:0007026!2.04e-11!155;UBERON:0004119!3.86e-10!169;UBERON:0000925!3.86e-10!169;UBERON:0006595!3.86e-10!169;UBERON:0001723!2.87e-09!3;UBERON:0001033!2.87e-09!3;UBERON:0010056!2.87e-09!3;UBERON:0001557!5.10e-08!19;UBERON:0007029!1.03e-07!1;UBERON:0000077!1.55e-07!130;UBERON:0000014!2.43e-07!4;UBERON:0002372!2.50e-07!1;UBERON:0001961!2.50e-07!1;UBERON:0001744!2.50e-07!1;UBERON:0001735!2.50e-07!1;UBERON:0002370!2.66e-07!4;UBERON:0005058!2.66e-07!4;UBERON:0009113!2.66e-07!4;UBERON:0003295!2.66e-07!4;UBERON:0005562!2.66e-07!4;UBERON:0000997!3.84e-07!1;UBERON:0005056!3.84e-07!1;UBERON:0001043!5.72e-07!4;UBERON:0009143!5.72e-07!4;UBERON:0008814!7.15e-07!15;UBERON:0001041!9.25e-07!98 | |ontology_enrichment_uberon=UBERON:0006562!1.02e-19!11;UBERON:0001042!1.90e-15!10;UBERON:0009145!1.90e-15!10;UBERON:0004921!1.95e-11!129;UBERON:0004185!1.95e-11!129;UBERON:0001007!2.04e-11!155;UBERON:0001555!2.04e-11!155;UBERON:0007026!2.04e-11!155;UBERON:0004119!3.86e-10!169;UBERON:0000925!3.86e-10!169;UBERON:0006595!3.86e-10!169;UBERON:0001723!2.87e-09!3;UBERON:0001033!2.87e-09!3;UBERON:0010056!2.87e-09!3;UBERON:0001557!5.10e-08!19;UBERON:0007029!1.03e-07!1;UBERON:0000077!1.55e-07!130;UBERON:0000014!2.43e-07!4;UBERON:0002372!2.50e-07!1;UBERON:0001961!2.50e-07!1;UBERON:0001744!2.50e-07!1;UBERON:0001735!2.50e-07!1;UBERON:0002370!2.66e-07!4;UBERON:0005058!2.66e-07!4;UBERON:0009113!2.66e-07!4;UBERON:0003295!2.66e-07!4;UBERON:0005562!2.66e-07!4;UBERON:0000997!3.84e-07!1;UBERON:0005056!3.84e-07!1;UBERON:0001043!5.72e-07!4;UBERON:0009143!5.72e-07!4;UBERON:0008814!7.15e-07!15;UBERON:0001041!9.25e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0001044;9.07e-18;6!UBERON:0003293;9.07e-18;6!UBERON:0003294;9.07e-18;6!UBERON:0010047;9.07e-18;6!UBERON:0003408;9.07e-18;6!UBERON:0000167;9.07e-18;6!UBERON:0001041;2.00e-08;14!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0001044;9.07e-18;6!UBERON:0003293;9.07e-18;6!UBERON:0003294;9.07e-18;6!UBERON:0010047;9.07e-18;6!UBERON:0003408;9.07e-18;6!UBERON:0000167;9.07e-18;6!UBERON:0001041;2.00e-08;14!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6;UBERON:0001044,9.07e-18,6;UBERON:0003293,9.07e-18,6;UBERON:0003294,9.07e-18,6;UBERON:0010047,9.07e-18,6;UBERON:0000167,9.07e-18,6;UBERON:0003408,3.02e-11,10 | |||
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|short_description=p@chr5:160356450..160356459,- | |short_description=p@chr5:160356450..160356459,- | ||
}} | }} |
Latest revision as of 12:30, 30 July 2015
Short description: | p@chr5:160356450..160356459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:160356450..160356459, - |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.96e-34 | 3 |
acinar cell | 5.15e-21 | 5 |
protein secreting cell | 9.07e-18 | 6 |
glandular epithelial cell | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
saliva-secreting gland | 9.07e-18 | 6 |
gland of oral region | 9.07e-18 | 6 |
gland of foregut | 9.07e-18 | 6 |
oral gland | 9.07e-18 | 6 |
oral cavity | 9.07e-18 | 6 |
gland of gut | 3.02e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |