FFCP PHASE1:Hg19::chr6:29855374..29855399,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3136 | |EntrezGene=3136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4965 | |HGNC=4965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_001434_5end | |association_with_transcript=0bp_to_NR_001434_5end | ||
|cluster_id=chr6:29855374..29855399,+ | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_3_at_HLA-H_5end | |description=CAGE_peak_3_at_HLA-H_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.85e-26;24!CL:0000542;1.28e-10;53!CL:0000236;5.49e-10;13!CL:0002032;1.55e-09;1!CL:0000557;1.55e-09;1 | |ontology_enrichment_celltype_v019=CL:0000945;3.85e-26;24!CL:0000542;1.28e-10;53!CL:0000236;5.49e-10;13!CL:0002032;1.55e-09;1!CL:0000557;1.55e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.32e-26,24;CL:0000826,3.32e-26,24;CL:0000838,5.71e-17,52;CL:0000542,1.29e-16,53;CL:0000051,1.29e-16,53;CL:0002031,3.61e-12,120;CL:0002087,4.76e-11,115;CL:0000738,1.97e-10,136;CL:0002032,9.10e-10,161;CL:0000837,9.10e-10,161;CL:0000236,2.42e-09,14;CL:0000037,3.05e-09,168;CL:0000988,1.25e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.28e-10;53!UBERON:0006242;1.32e-09;1 | |ontology_enrichment_development_v019=CL:0000051;1.28e-10;53!UBERON:0006242;1.32e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;9.43e-10;1!DOID:0050177;9.43e-10;1!DOID:0050427;9.43e-10;1 | |ontology_enrichment_disease_v019=DOID:630;9.43e-10;1!DOID:0050177;9.43e-10;1!DOID:0050427;9.43e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.03e-09,1;DOID:0050177,1.03e-09,1;DOID:0050427,1.03e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.17e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!7.17e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@HLA-H | |short_description=p3@HLA-H | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p3@HLA-H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLA-H_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_NR_001434_5end |
EntrezGene: | HLA-H |
HGNC: | 4965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.32e-26 | 24 |
pro-B cell | 3.32e-26 | 24 |
lymphoid lineage restricted progenitor cell | 5.71e-17 | 52 |
lymphocyte | 1.29e-16 | 53 |
common lymphoid progenitor | 1.29e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 3.61e-12 | 120 |
nongranular leukocyte | 4.76e-11 | 115 |
leukocyte | 1.97e-10 | 136 |
hematopoietic oligopotent progenitor cell | 9.10e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.10e-10 | 161 |
B cell | 2.42e-09 | 14 |
hematopoietic stem cell | 3.05e-09 | 168 |
hematopoietic cell | 1.25e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.03e-09 | 1 |
monogenic disease | 1.03e-09 | 1 |
xeroderma pigmentosum | 1.03e-09 | 1 |