FFCP PHASE1:Hg19::chr1:25291275..25291301,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:25291275..25291301,-
|short_description=p12@RUNX3
|description=CAGE_peak_12_at_RUNX3_5end
|association_with_transcript=199bp_to_ENST00000399916,NM_00103168...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=B1AJV5,Q13761 | |UniProt=B1AJV5,Q13761 | ||
|association_with_transcript=199bp_to_ENST00000399916,NM_001031680,uc001bjr.2,uc009vrk.2_5end | |||
|cluster_id=chr1:25291275..25291301,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_12_at_RUNX3_5end | |||
|id=chr1:25291275..25291301,- | |||
|ontology_enrichment_celltype=CL:0000838!7.17e-15!52;CL:0000542!1.73e-14!53;CL:0000051!1.73e-14!53;CL:0000988!1.81e-13!182;CL:0002032!3.85e-13!165;CL:0000837!3.85e-13!165;CL:0000037!3.32e-12!172;CL:0000566!3.32e-12!172;CL:0000084!2.99e-10!25;CL:0000827!2.99e-10!25;CL:0000738!2.28e-08!140;CL:0002031!6.08e-08!124;CL:0002087!9.57e-08!119;CL:0000453!1.02e-07!5;CL:0002556!6.13e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000062;9.18e-21;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,3.90e-17,11;CL:0000375,3.90e-17,11;CL:0000335,3.90e-17,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.00e-17;11 | |||
|ontology_enrichment_disease=DOID:2531!2.07e-10!51;DOID:0060083!2.07e-10!51;DOID:1240!4.19e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:630;5.71e-21;1!DOID:0050177;5.71e-21;1!DOID:0050427;5.71e-21;1!DOID:1909;2.35e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.45e-21,1;DOID:0050177,3.45e-21,1;DOID:0050427,3.45e-21,1;DOID:1909,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!6.13e-07!6;UBERON:0003672!6.13e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.00e-10;18!UBERON:0001434;1.00e-09;36!UBERON:0004765;1.32e-07;26 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@RUNX3 | |||
}} | }} |
Latest revision as of 02:39, 17 September 2015
Short description: | p12@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RUNX3_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | 199bp_to_ENST00000399916, NM_001031680, uc001bjr.2, uc009vrk.2_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | B1AJV5Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 3.90e-17 | 11 |
osteoprogenitor cell | 3.90e-17 | 11 |
mesenchyme condensation cell | 3.90e-17 | 11 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.45e-21 | 1 |
monogenic disease | 3.45e-21 | 1 |
xeroderma pigmentosum | 3.45e-21 | 1 |
melanoma | 2.47e-11 | 2 |