FFCP PHASE1:Hg19::chr17:39674844..39674854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39674844..39674854,+ | |||
|coexpression_cluster_id=C441 | |coexpression_cluster_id=C441 | ||
|description=CAGE_peak_at_chr17:39674844..39674854,+ | |description=CAGE_peak_at_chr17:39674844..39674854,+ | ||
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|ontology_enrichment_celltype=CL:0002327!1.12e-16!4;CL:0002251!8.49e-12!21;CL:0000240!1.35e-11!6;CL:0000311!1.35e-11!6;CL:0000079!1.35e-11!6;CL:0000237!1.35e-11!6;CL:0000036!1.35e-11!6;CL:0000357!1.35e-11!6;CL:0000114!1.35e-11!6;CL:0002231!1.05e-10!3;CL:0002076!1.37e-09!43;CL:0002336!1.02e-08!1;CL:0002261!1.02e-08!1;CL:0002170!1.02e-08!1;CL:0000076!4.97e-08!62;CL:0000312!8.90e-07!5 | |ontology_enrichment_celltype=CL:0002327!1.12e-16!4;CL:0002251!8.49e-12!21;CL:0000240!1.35e-11!6;CL:0000311!1.35e-11!6;CL:0000079!1.35e-11!6;CL:0000237!1.35e-11!6;CL:0000036!1.35e-11!6;CL:0000357!1.35e-11!6;CL:0000114!1.35e-11!6;CL:0002231!1.05e-10!3;CL:0002076!1.37e-09!43;CL:0002336!1.02e-08!1;CL:0002261!1.02e-08!1;CL:0002170!1.02e-08!1;CL:0000076!4.97e-08!62;CL:0000312!8.90e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000312;3.10e-09;5!CL:0000240;6.55e-08;6!CL:0000311;6.55e-08;6!CL:0000079;6.55e-08;6!CL:0000237;6.55e-08;6 | |ontology_enrichment_celltype_v019=CL:0000312;3.10e-09;5!CL:0000240;6.55e-08;6!CL:0000311;6.55e-08;6!CL:0000079;6.55e-08;6!CL:0000237;6.55e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.55e-08;6!CL:0000114;6.55e-08;6 | |ontology_enrichment_development_v019=CL:0000357;6.55e-08;6!CL:0000114;6.55e-08;6 | ||
|ontology_enrichment_disease=DOID:1749!1.39e-12!14;DOID:3151!5.59e-09!1;DOID:3149!5.59e-09!1;DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1 | |ontology_enrichment_disease=DOID:1749!1.39e-12!14;DOID:3151!5.59e-09!1;DOID:3149!5.59e-09!1;DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;6.62e-41;1!DOID:3149;6.62e-41;1!DOID:3451;3.11e-21;2!DOID:4159;3.11e-21;2!DOID:0060122;3.11e-21;2!DOID:1749;2.51e-12;14 | |ontology_enrichment_disease_v019=DOID:3151;6.62e-41;1!DOID:3149;6.62e-41;1!DOID:3451;3.11e-21;2!DOID:4159;3.11e-21;2!DOID:0060122;3.11e-21;2!DOID:1749;2.51e-12;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,6.62e-41,1;DOID:3149,6.62e-41,1;DOID:3451,3.11e-21,2;DOID:4159,3.11e-21,2;DOID:0060122,3.11e-21,2;DOID:1749,2.24e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!4.03e-23!5;UBERON:0001723!3.49e-22!3;UBERON:0001033!3.49e-22!3;UBERON:0010056!3.49e-22!3;UBERON:0001911!1.12e-16!4;UBERON:0005333!1.12e-16!4;UBERON:0008425!1.12e-16!4;UBERON:0005311!1.12e-16!4;UBERON:0003343!1.47e-16!4;UBERON:0004785!1.47e-16!4;UBERON:0000166!5.78e-16!21;UBERON:0000165!2.36e-15!28;UBERON:0000930!2.36e-15!28;UBERON:0000161!2.90e-15!35;UBERON:0003102!2.66e-12!95;UBERON:0001042!1.31e-11!10;UBERON:0009145!1.31e-11!10;UBERON:0000974!1.73e-11!10;UBERON:0001444!8.70e-11!48;UBERON:0006562!1.44e-10!11;UBERON:0000344!9.49e-10!12;UBERON:0000076!1.34e-08!8;UBERON:0000997!3.79e-08!1;UBERON:0005056!3.79e-08!1;UBERON:0008814!8.76e-08!15;UBERON:0000020!1.04e-07!23;UBERON:0001032!2.22e-07!24;UBERON:0004456!2.22e-07!24 | |ontology_enrichment_uberon=UBERON:0003729!4.03e-23!5;UBERON:0001723!3.49e-22!3;UBERON:0001033!3.49e-22!3;UBERON:0010056!3.49e-22!3;UBERON:0001911!1.12e-16!4;UBERON:0005333!1.12e-16!4;UBERON:0008425!1.12e-16!4;UBERON:0005311!1.12e-16!4;UBERON:0003343!1.47e-16!4;UBERON:0004785!1.47e-16!4;UBERON:0000166!5.78e-16!21;UBERON:0000165!2.36e-15!28;UBERON:0000930!2.36e-15!28;UBERON:0000161!2.90e-15!35;UBERON:0003102!2.66e-12!95;UBERON:0001042!1.31e-11!10;UBERON:0009145!1.31e-11!10;UBERON:0000974!1.73e-11!10;UBERON:0001444!8.70e-11!48;UBERON:0006562!1.44e-10!11;UBERON:0000344!9.49e-10!12;UBERON:0000076!1.34e-08!8;UBERON:0000997!3.79e-08!1;UBERON:0005056!3.79e-08!1;UBERON:0008814!8.76e-08!15;UBERON:0000020!1.04e-07!23;UBERON:0001032!2.22e-07!24;UBERON:0004456!2.22e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0000014;2.53e-11;4!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000974;6.55e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0001723;1.71e-14;3!UBERON:0001033;1.71e-14;3!UBERON:0000014;2.53e-11;4!UBERON:0003343;3.26e-11;4!UBERON:0004785;3.26e-11;4!UBERON:0000974;6.55e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.83e-14,3;UBERON:0001033,1.83e-14,3;UBERON:0010056,1.83e-14,3;UBERON:0000014,2.53e-11,4;UBERON:0003343,2.80e-11,4;UBERON:0004785,2.80e-11,4;UBERON:0000166,3.15e-08,22;UBERON:0003102,4.69e-07,99 | |||
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|short_description=p@chr17:39674844..39674854,+ | |short_description=p@chr17:39674844..39674854,+ | ||
}} | }} |
Latest revision as of 16:42, 25 July 2015
Short description: | p@chr17:39674844..39674854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39674844..39674854, + |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.83e-14 | 3 |
gustatory system | 1.83e-14 | 3 |
future tongue | 1.83e-14 | 3 |
zone of skin | 2.53e-11 | 4 |
mucosa of oral region | 2.80e-11 | 4 |
respiratory system mucosa | 2.80e-11 | 4 |
oral opening | 3.15e-08 | 22 |
surface structure | 4.69e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.62e-41 | 1 |
keratoacanthoma | 6.62e-41 | 1 |
skin carcinoma | 3.11e-21 | 2 |
skin cancer | 3.11e-21 | 2 |
integumentary system cancer | 3.11e-21 | 2 |
squamous cell carcinoma | 2.24e-12 | 14 |