FFCP PHASE1:Hg19::chr19:1753498..1753519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390874 | |EntrezGene=390874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13399 | |HGNC=13399 | ||
|TSSclassifier=strong | |||
|UniProt=O60422 | |UniProt=O60422 | ||
|association_with_transcript=-142bp_to_NM_001080488,uc010xgr.1_5end | |association_with_transcript=-142bp_to_NM_001080488,uc010xgr.1_5end | ||
|cluster_id=chr19:1753498..1753519,+ | |||
|coexpression_cluster_id=C3764 | |coexpression_cluster_id=C3764 | ||
|description=CAGE_peak_1_at_ONECUT3_5end | |description=CAGE_peak_1_at_ONECUT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.46e-13;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.46e-13;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.51e-13,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.83e-11;1 | |ontology_enrichment_development_v019=UBERON:0006242;9.83e-11;1 | ||
|ontology_enrichment_disease=DOID:305!4.76e-12!106;DOID:0050687!1.26e-10!143;DOID:3493!1.93e-09!2;DOID:299!4.58e-09!25;DOID:4929!1.37e-08!2;DOID:162!1.91e-07!235;DOID:14566!3.75e-07!239 | |ontology_enrichment_disease=DOID:305!4.76e-12!106;DOID:0050687!1.26e-10!143;DOID:3493!1.93e-09!2;DOID:299!4.58e-09!25;DOID:4929!1.37e-08!2;DOID:162!1.91e-07!235;DOID:14566!3.75e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3493;6.44e-20;2!DOID:299;1.88e-17;25!DOID:3111;1.65e-10;1!DOID:3603;1.65e-10;1 | |ontology_enrichment_disease_v019=DOID:3493;6.44e-20;2!DOID:299;1.88e-17;25!DOID:3111;1.65e-10;1!DOID:3603;1.65e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,6.44e-20,2;DOID:299,1.86e-17,25;DOID:3111,1.73e-10,1;DOID:3603,1.73e-10,1;DOID:305,1.73e-10,106;DOID:0050687,3.01e-10,143;DOID:162,2.18e-08,235;DOID:14566,3.74e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.46e-13!7;UBERON:0001173!1.46e-13!7;UBERON:0004912!1.46e-13!7;UBERON:0002394!3.90e-09!4;UBERON:0003928!3.90e-09!4 | |ontology_enrichment_uberon=UBERON:0002294!1.46e-13!7;UBERON:0001173!1.46e-13!7;UBERON:0004912!1.46e-13!7;UBERON:0002394!3.90e-09!4;UBERON:0003928!3.90e-09!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.26e-17;5!UBERON:0010039;2.26e-17;5 | |ontology_enrichment_uberon_v019=UBERON:0000945;2.26e-17;5!UBERON:0010039;2.26e-17;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.63e-11,8;UBERON:0010039,4.63e-11,8 | |||
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| ||
|short_description=p1@ONECUT3 | |short_description=p1@ONECUT3 | ||
}} | }} |
Latest revision as of 12:12, 16 September 2015
Short description: | p1@ONECUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ONECUT3_5end |
Coexpression cluster: | C3764_rhabdomyosarcoma_signet_gastric_gall_giant_endometrioid_adenocarcinoma |
Association with transcript: | -142bp_to_NM_001080488, uc010xgr.1_5end |
EntrezGene: | ONECUT3 |
HGNC: | 13399 |
UniProt: | O60422 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.51e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 4.63e-11 | 8 |
food storage organ | 4.63e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.44e-20 | 2 |
adenocarcinoma | 1.86e-17 | 25 |
cystadenocarcinoma | 1.73e-10 | 1 |
mucinous cystadenocarcinoma | 1.73e-10 | 1 |
carcinoma | 1.73e-10 | 106 |
cell type cancer | 3.01e-10 | 143 |
cancer | 2.18e-08 | 235 |
disease of cellular proliferation | 3.74e-08 | 239 |