FFCP PHASE1:Hg19::chr1:41707955..41707966,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:41707955..41707966,-
|short_description=p4@SCMH1
|description=CAGE_peak_4_at_SCMH1_5end
|association_with_transcript=-129bp_to_ENST00000488592_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22955 | |EntrezGene=22955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19003 | |HGNC=19003 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_ENST00000488592_5end | |||
|cluster_id=chr1:41707955..41707966,- | |||
|description=CAGE_peak_4_at_SCMH1_5end | |||
|id=chr1:41707955..41707966,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;2.28e-10;3!CL:0002363;3.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.82e-10,3;CL:0002363,5.21e-07,2;CL:0000008,5.21e-07,2;CL:0000151,6.04e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000008;3.53e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.92e-07!169;UBERON:0000925!6.92e-07!169;UBERON:0006595!6.92e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.47e-07;4!UBERON:0003566;3.53e-07;2!UBERON:0001777;3.53e-07;2!UBERON:0003135;4.68e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.24e-07,4;UBERON:0003135,3.04e-07,11;UBERON:0003566,5.21e-07,2;UBERON:0001777,5.21e-07,2 | |||
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| ||
|short_description=p4@SCMH1 | |||
}} | }} |
Latest revision as of 02:21, 18 September 2015
Short description: | p4@SCMH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SCMH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000488592_5end |
EntrezGene: | SCMH1 |
HGNC: | 19003 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.82e-10 | 3 |
keratocyte | 5.21e-07 | 2 |
migratory cranial neural crest cell | 5.21e-07 | 2 |
secretory cell | 6.04e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.24e-07 | 4 |
male reproductive organ | 3.04e-07 | 11 |
head connective tissue | 5.21e-07 | 2 |
substantia propria of cornea | 5.21e-07 | 2 |