FFCP PHASE1:Hg19::chr14:106324410..106324421,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106324410..106324421,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_at_chr14:106324410..106324421,- | |description=CAGE_peak_at_chr14:106324410..106324421,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.17e-62!24;CL:0000826!1.17e-62!24;CL:0000236!1.55e-40!14;CL:0000542!1.22e-37!53;CL:0000051!1.22e-37!53;CL:0000838!5.98e-35!52;CL:0002087!3.31e-19!119;CL:0000738!1.13e-16!140;CL:0000037!1.44e-14!172;CL:0000566!1.44e-14!172;CL:0002031!9.72e-14!124;CL:0000988!2.26e-13!182;CL:0002032!4.68e-13!165;CL:0000837!4.68e-13!165 | |ontology_enrichment_celltype=CL:0000945!1.17e-62!24;CL:0000826!1.17e-62!24;CL:0000236!1.55e-40!14;CL:0000542!1.22e-37!53;CL:0000051!1.22e-37!53;CL:0000838!5.98e-35!52;CL:0002087!3.31e-19!119;CL:0000738!1.13e-16!140;CL:0000037!1.44e-14!172;CL:0000566!1.44e-14!172;CL:0002031!9.72e-14!124;CL:0000988!2.26e-13!182;CL:0002032!4.68e-13!165;CL:0000837!4.68e-13!165 | ||
|ontology_enrichment_celltype_v019=CL:0000236;8.92e-100;13!CL:0000945;1.49e-77;24!CL:0000542;6.20e-32;53!CL:0002087;3.83e-07;104 | |ontology_enrichment_celltype_v019=CL:0000236;8.92e-100;13!CL:0000945;1.49e-77;24!CL:0000542;6.20e-32;53!CL:0002087;3.83e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.06e-92,14;CL:0000945,1.26e-77,24;CL:0000826,1.26e-77,24;CL:0000542,9.25e-41,53;CL:0000051,9.25e-41,53;CL:0000838,3.09e-35,52;CL:0002087,6.73e-18,115;CL:0000738,6.22e-15,136;CL:0002031,2.09e-14,120;CL:0002032,2.13e-12,161;CL:0000837,2.13e-12,161;CL:0000037,8.05e-12,168;CL:0000988,3.81e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.20e-32;53 | |ontology_enrichment_development_v019=CL:0000051;6.20e-32;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;5.42e-15;1!DOID:4960;1.00e-14;1!DOID:0070004;1.00e-14;1 | |ontology_enrichment_disease_v019=DOID:12603;5.42e-15;1!DOID:4960;1.00e-14;1!DOID:0070004;1.00e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,5.42e-15,1;DOID:4960,1.23e-14,1;DOID:0070004,1.23e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.63e-09!15;UBERON:0000179!4.63e-09!15;UBERON:0000463!4.63e-09!15;UBERON:0004177!8.63e-09!7 | |ontology_enrichment_uberon=UBERON:0000178!4.63e-09!15;UBERON:0000179!4.63e-09!15;UBERON:0000463!4.63e-09!15;UBERON:0004177!8.63e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.10e-14;1!UBERON:0001961;2.10e-14;1!UBERON:0001744;2.10e-14;1!UBERON:0001042;2.10e-14;1!UBERON:0001735;2.10e-14;1!UBERON:0006562;7.52e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0002372;2.10e-14;1!UBERON:0001961;2.10e-14;1!UBERON:0001744;2.10e-14;1!UBERON:0001042;2.10e-14;1!UBERON:0001735;2.10e-14;1!UBERON:0006562;7.52e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.15e-14,1;UBERON:0001961,3.15e-14,1;UBERON:0001744,3.15e-14,1;UBERON:0001735,3.15e-14,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,2.63388481973026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,1.63841583378639,1.77901850772711,3.41384178053206,4.40435585739614,2.29900975981793,1.32208974556972,0.954053754535364,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,2.46817363851717,0,0.540031437238115,0,0,0,0,6.13150477914872,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.369254416383208,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06657975592979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,1.01028079521881,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.393553906568396,0,0,0.154816123316076,0,0,0,2.63388481973026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,1.63841583378639,1.77901850772711,3.41384178053206,4.40435585739614,2.29900975981793,1.32208974556972,0.954053754535364,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,2.46817363851717,0,0.540031437238115,0,0,0,0,6.13150477914872,0.144269212976445,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.369254416383208,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06657975592979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,1.01028079521881,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr14:106324410..106324421,- | |short_description=p@chr14:106324410..106324421,- | ||
}} | }} |
Latest revision as of 18:41, 24 July 2015
Short description: | p@chr14:106324410..106324421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106324410..106324421, - |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.06e-92 | 14 |
lymphocyte of B lineage | 1.26e-77 | 24 |
pro-B cell | 1.26e-77 | 24 |
lymphocyte | 9.25e-41 | 53 |
common lymphoid progenitor | 9.25e-41 | 53 |
lymphoid lineage restricted progenitor cell | 3.09e-35 | 52 |
nongranular leukocyte | 6.73e-18 | 115 |
leukocyte | 6.22e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.09e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.13e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-12 | 161 |
hematopoietic stem cell | 8.05e-12 | 168 |
hematopoietic cell | 3.81e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.15e-14 | 1 |
mucosa-associated lymphoid tissue | 3.15e-14 | 1 |
lymphoid tissue | 3.15e-14 | 1 |
tonsillar ring | 3.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.42e-15 | 1 |
bone marrow cancer | 1.23e-14 | 1 |
myeloma | 1.23e-14 | 1 |