FFCP PHASE1:Hg19::chr3:140770345..140770394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92369 | |EntrezGene=92369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30630 | |HGNC=30630 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A44 | |UniProt=Q96A44 | ||
|association_with_transcript=101bp_to_ENST00000310546_5end | |association_with_transcript=101bp_to_ENST00000310546_5end | ||
|cluster_id=chr3:140770345..140770394,+ | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_5_at_SPSB4_5end | |description=CAGE_peak_5_at_SPSB4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000242!8.55e-07!2 | |ontology_enrichment_celltype=CL:0000242!8.55e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.28e-79;2!CL:0000242;1.28e-79;2!CL:0000312;1.14e-32;5!CL:0000240;1.95e-27;6!CL:0000311;1.95e-27;6!CL:0000079;1.95e-27;6!CL:0000237;1.95e-27;6!CL:0000047;6.30e-21;2!CL:0000362;1.08e-18;9!CL:0002319;4.96e-14;25!CL:0002159;2.06e-12;14!CL:0000095;2.04e-09;17 | |ontology_enrichment_celltype_v019=CL:0000123;1.28e-79;2!CL:0000242;1.28e-79;2!CL:0000312;1.14e-32;5!CL:0000240;1.95e-27;6!CL:0000311;1.95e-27;6!CL:0000079;1.95e-27;6!CL:0000237;1.95e-27;6!CL:0000047;6.30e-21;2!CL:0000362;1.08e-18;9!CL:0002319;4.96e-14;25!CL:0002159;2.06e-12;14!CL:0000095;2.04e-09;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.56e-79,2;CL:0000312,1.23e-32,5;CL:0000240,2.08e-27,6;CL:0000311,2.08e-27,6;CL:0000079,2.08e-27,6;CL:0000237,2.08e-27,6;CL:0000036,2.08e-27,6;CL:0000357,2.08e-27,6;CL:0000114,2.08e-27,6;CL:0000362,1.13e-18,9;CL:0002319,5.18e-14,25;CL:0002159,2.12e-12,14;CL:0000095,2.08e-09,17;CL:0000123,2.08e-09,17 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.21e-40;1!CL:0000357;1.95e-27;6!CL:0000114;1.95e-27;6 | |ontology_enrichment_development_v019=UBERON:0000358;1.21e-40;1!CL:0000357;1.95e-27;6!CL:0000114;1.95e-27;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!5.01e-09!10;UBERON:0000358!5.01e-09!10;UBERON:0000307!5.01e-09!10;UBERON:0000091!5.01e-09!10;UBERON:0000087!5.01e-09!10;UBERON:0007806!5.01e-09!10;UBERON:0008780!5.01e-09!10;UBERON:0005728!5.01e-09!10;UBERON:0001017!5.47e-09!82;UBERON:0000073!6.85e-09!94;UBERON:0001016!6.85e-09!94;UBERON:0005743!2.49e-08!86;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57 | |ontology_enrichment_uberon=UBERON:0002331!5.01e-09!10;UBERON:0000358!5.01e-09!10;UBERON:0000307!5.01e-09!10;UBERON:0000091!5.01e-09!10;UBERON:0000087!5.01e-09!10;UBERON:0007806!5.01e-09!10;UBERON:0008780!5.01e-09!10;UBERON:0005728!5.01e-09!10;UBERON:0001017!5.47e-09!82;UBERON:0000073!6.85e-09!94;UBERON:0001016!6.85e-09!94;UBERON:0005743!2.49e-08!86;UBERON:0001049!2.02e-07!57;UBERON:0005068!2.02e-07!57;UBERON:0006241!2.02e-07!57;UBERON:0007135!2.02e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.18e-11;15!UBERON:0007376;1.18e-11;15 | |ontology_enrichment_uberon_v019=UBERON:0001003;1.18e-11;15!UBERON:0007376;1.18e-11;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.21e-11,15;UBERON:0007376,1.21e-11,15;UBERON:0007383,1.21e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.868124974666461,0.885741385813839,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0.417687798021821,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,10.2893930313686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0.407955318967927,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.868124974666461,0.885741385813839,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0.417687798021821,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,2.34167452903441,10.2893930313686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0.380095503034311,0.407955318967927,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p5@SPSB4 | |short_description=p5@SPSB4 | ||
}} | }} |
Latest revision as of 02:41, 25 September 2015
Short description: | p5@SPSB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPSB4_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 101bp_to_ENST00000310546_5end |
EntrezGene: | SPSB4 |
HGNC: | 30630 |
UniProt: | Q96A44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.56e-79 | 2 |
keratinocyte | 1.23e-32 | 5 |
stratified squamous epithelial cell | 2.08e-27 | 6 |
keratin accumulating cell | 2.08e-27 | 6 |
stratified epithelial cell | 2.08e-27 | 6 |
keratinizing barrier epithelial cell | 2.08e-27 | 6 |
epithelial fate stem cell | 2.08e-27 | 6 |
stratified epithelial stem cell | 2.08e-27 | 6 |
surface ectodermal cell | 2.08e-27 | 6 |
epidermal cell | 1.13e-18 | 9 |
neural cell | 5.18e-14 | 25 |
general ecto-epithelial cell | 2.12e-12 | 14 |
neuron associated cell | 2.08e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.08e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.21e-11 | 15 |
outer epithelium | 1.21e-11 | 15 |
enveloping layer of ectoderm | 1.21e-11 | 15 |