FFCP PHASE1:Hg19::chr6:75886595..75886610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75886595..75886610,- | |||
|coexpression_cluster_id=C1280 | |coexpression_cluster_id=C1280 | ||
|description=CAGE_peak_at_chr6:75886595..75886610,- | |description=CAGE_peak_at_chr6:75886595..75886610,- | ||
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|ontology_enrichment_celltype=CL:0000057!6.80e-14!75;CL:0000055!5.87e-13!180;CL:0002620!2.43e-12!23;CL:0002334!8.17e-07!12 | |ontology_enrichment_celltype=CL:0000057!6.80e-14!75;CL:0000055!5.87e-13!180;CL:0002620!2.43e-12!23;CL:0002334!8.17e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.44e-29;23!CL:0002334;8.22e-21;12!CL:0002580;5.21e-17;3!CL:0002579;3.06e-16;3!CL:0002617;1.18e-11;2!CL:0000057;7.54e-10;73!CL:0000138;3.07e-08;6!CL:0002615;1.07e-07;3!CL:0000135;1.86e-07;3!CL:0000388;1.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;2.44e-29;23!CL:0002334;8.22e-21;12!CL:0002580;5.21e-17;3!CL:0002579;3.06e-16;3!CL:0002617;1.18e-11;2!CL:0000057;7.54e-10;73!CL:0000138;3.07e-08;6!CL:0002615;1.07e-07;3!CL:0000135;1.86e-07;3!CL:0000388;1.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.97e-29,23;CL:0000057,1.50e-27,76;CL:0002334,1.14e-20,12;CL:0002580,5.52e-17,3;CL:0002579,6.63e-16,3;CL:0000136,9.53e-12,15;CL:0002617,9.57e-12,2;CL:0000134,7.51e-09,354;CL:0002320,1.51e-08,361;CL:0000058,2.55e-08,6;CL:0000138,2.55e-08,6;CL:0002615,1.02e-07,3;CL:0000135,1.63e-07,3;CL:0000388,1.63e-07,3;CL:0000219,1.78e-07,386;CL:0000048,7.95e-07,427 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.33e-07!5;DOID:450!1.33e-07!5;DOID:66!1.33e-07!5;DOID:423!1.33e-07!5;DOID:0080000!1.33e-07!5;DOID:11722!1.33e-07!5 | |ontology_enrichment_disease=DOID:17!1.33e-07!5;DOID:450!1.33e-07!5;DOID:66!1.33e-07!5;DOID:423!1.33e-07!5;DOID:0080000!1.33e-07!5;DOID:11722!1.33e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.74e-24;5!DOID:450;2.74e-24;5!DOID:66;2.74e-24;5!DOID:423;2.74e-24;5!DOID:0080000;2.74e-24;5!DOID:11722;2.74e-24;5 | |ontology_enrichment_disease_v019=DOID:17;2.74e-24;5!DOID:450;2.74e-24;5!DOID:66;2.74e-24;5!DOID:423;2.74e-24;5!DOID:0080000;2.74e-24;5!DOID:11722;2.74e-24;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.45e-24,5;DOID:450,3.45e-24,5;DOID:66,3.45e-24,5;DOID:423,3.45e-24,5;DOID:0080000,3.45e-24,5;DOID:11722,3.45e-24,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.17e-11!95;UBERON:0002097!2.27e-09!40;UBERON:0003688!4.97e-09!6;UBERON:0002358!4.97e-09!6;UBERON:0003684!4.97e-09!6;UBERON:0001178!4.97e-09!6;UBERON:0002199!1.23e-07!45;UBERON:0002416!1.23e-07!45 | |ontology_enrichment_uberon=UBERON:0003102!3.17e-11!95;UBERON:0002097!2.27e-09!40;UBERON:0003688!4.97e-09!6;UBERON:0002358!4.97e-09!6;UBERON:0003684!4.97e-09!6;UBERON:0001178!4.97e-09!6;UBERON:0002199!1.23e-07!45;UBERON:0002416!1.23e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-21;6!UBERON:0002358;2.64e-21;6!UBERON:0003684;2.64e-21;6!UBERON:0001178;2.64e-21;6!UBERON:0004457;3.92e-14;9!UBERON:0000042;3.92e-14;9!UBERON:0000310;2.54e-13;10!UBERON:0002097;2.57e-12;41!UBERON:0001443;4.40e-12;11!UBERON:0002199;3.56e-10;46!UBERON:0002416;3.56e-10;46!UBERON:0007846;1.86e-07;3!UBERON:0000043;1.86e-07;3!UBERON:0007845;1.86e-07;3!UBERON:0003102;4.48e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0003688;2.64e-21;6!UBERON:0002358;2.64e-21;6!UBERON:0003684;2.64e-21;6!UBERON:0001178;2.64e-21;6!UBERON:0004457;3.92e-14;9!UBERON:0000042;3.92e-14;9!UBERON:0000310;2.54e-13;10!UBERON:0002097;2.57e-12;41!UBERON:0001443;4.40e-12;11!UBERON:0002199;3.56e-10;46!UBERON:0002416;3.56e-10;46!UBERON:0007846;1.86e-07;3!UBERON:0000043;1.86e-07;3!UBERON:0007845;1.86e-07;3!UBERON:0003102;4.48e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.68e-21,6;UBERON:0002358,4.68e-21,6;UBERON:0003684,4.68e-21,6;UBERON:0001178,4.68e-21,6;UBERON:0002097,2.00e-15,41;UBERON:0002199,1.75e-13,46;UBERON:0002416,1.75e-13,46;UBERON:0000310,2.37e-13,10;UBERON:0001443,4.12e-12,11;UBERON:0004457,2.04e-10,12;UBERON:0000042,2.04e-10,12;UBERON:0002384,5.85e-09,371;UBERON:0007846,1.63e-07,3;UBERON:0000043,1.63e-07,3;UBERON:0007845,1.63e-07,3;UBERON:0003102,4.94e-07,99 | |||
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| ||
|short_description=p@chr6:75886595..75886610,- | |short_description=p@chr6:75886595..75886610,- | ||
}} | }} |
Latest revision as of 03:14, 31 July 2015
Short description: | p@chr6:75886595..75886610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75886595..75886610, - |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.97e-29 | 23 |
fibroblast | 1.50e-27 | 76 |
preadipocyte | 1.14e-20 | 12 |
preadipocyte of the breast | 5.52e-17 | 3 |
omentum preadipocyte | 6.63e-16 | 3 |
fat cell | 9.53e-12 | 15 |
adipocyte of breast | 9.57e-12 | 2 |
mesenchymal cell | 7.51e-09 | 354 |
connective tissue cell | 1.51e-08 | 361 |
chondroblast | 2.55e-08 | 6 |
chondrocyte | 2.55e-08 | 6 |
adipocyte of omentum tissue | 1.02e-07 | 3 |
fibrocyte | 1.63e-07 | 3 |
tendon cell | 1.63e-07 | 3 |
motile cell | 1.78e-07 | 386 |
multi fate stem cell | 7.95e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.68e-21 | 6 |
peritoneum | 4.68e-21 | 6 |
abdominal cavity | 4.68e-21 | 6 |
visceral peritoneum | 4.68e-21 | 6 |
skin of body | 2.00e-15 | 41 |
integument | 1.75e-13 | 46 |
integumental system | 1.75e-13 | 46 |
breast | 2.37e-13 | 10 |
chest | 4.12e-12 | 11 |
cavity lining | 2.04e-10 | 12 |
serous membrane | 2.04e-10 | 12 |
connective tissue | 5.85e-09 | 371 |
dense regular connective tissue | 1.63e-07 | 3 |
tendon | 1.63e-07 | 3 |
regular connective tissue | 1.63e-07 | 3 |
surface structure | 4.94e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.45e-24 | 5 |
myotonic disease | 3.45e-24 | 5 |
muscle tissue disease | 3.45e-24 | 5 |
myopathy | 3.45e-24 | 5 |
muscular disease | 3.45e-24 | 5 |
myotonic dystrophy | 3.45e-24 | 5 |