FFCP PHASE1:Hg19::chr2:3998213..3998216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:3998213..3998216,+ | |||
|coexpression_cluster_id=C604 | |coexpression_cluster_id=C604 | ||
|description=CAGE_peak_at_chr2:3998213..3998216,+ | |description=CAGE_peak_at_chr2:3998213..3998216,+ | ||
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|ontology_enrichment_celltype=CL:0000057!1.37e-15!75;CL:0000055!4.70e-11!180;CL:0000723!3.65e-08!436;CL:0000034!1.31e-07!444;CL:0000048!2.18e-07!430;CL:0002334!2.43e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.37e-15!75;CL:0000055!4.70e-11!180;CL:0000723!3.65e-08!436;CL:0000034!1.31e-07!444;CL:0000048!2.18e-07!430;CL:0002334!2.43e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000632;3.06e-13;3!CL:0002616;8.93e-11;1!CL:0002174;2.38e-10;1!CL:0000501;2.38e-10;1!CL:0000197;6.48e-07;6!CL:0000098;6.48e-07;6!CL:0002167;6.48e-07;6 | |ontology_enrichment_celltype_v019=CL:0000632;3.06e-13;3!CL:0002616;8.93e-11;1!CL:0002174;2.38e-10;1!CL:0000501;2.38e-10;1!CL:0000197;6.48e-07;6!CL:0000098;6.48e-07;6!CL:0002167;6.48e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.47e-13,3;CL:0002616,8.95e-11,1;CL:0002174,2.50e-10,1;CL:0000501,2.50e-10,1;CL:0000136,5.58e-10,15;CL:0000197,6.29e-07,6;CL:0000098,6.29e-07,6;CL:0002167,6.29e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.11e-09!14 | |ontology_enrichment_disease=DOID:2394!1.11e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:3369;2.38e-10;1!DOID:3571;2.38e-10;1 | |ontology_enrichment_disease_v019=DOID:3369;2.38e-10;1!DOID:3571;2.38e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3369,1.19e-10,1;DOID:3571,2.08e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.25e-07!45;UBERON:0002416!1.25e-07!45;UBERON:0002097!3.97e-07!40 | |ontology_enrichment_uberon=UBERON:0002199!1.25e-07!45;UBERON:0002416!1.25e-07!45;UBERON:0002097!3.97e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;3.92e-08;5!UBERON:0003688;4.73e-07;6!UBERON:0002358;4.73e-07;6!UBERON:0003684;4.73e-07;6!UBERON:0001178;4.73e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002118;3.92e-08;5!UBERON:0003688;4.73e-07;6!UBERON:0002358;4.73e-07;6!UBERON:0003684;4.73e-07;6!UBERON:0001178;4.73e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,2.63e-08,5;UBERON:0003688,5.75e-07,6;UBERON:0002358,5.75e-07,6;UBERON:0003684,5.75e-07,6;UBERON:0001178,5.75e-07,6 | |||
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| ||
|short_description=p@chr2:3998213..3998216,+ | |short_description=p@chr2:3998213..3998216,+ | ||
}} | }} |
Latest revision as of 10:05, 29 July 2015
Short description: | p@chr2:3998213..3998216, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:3998213..3998216, + |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.47e-13 | 3 |
perirenal adipocyte cell | 8.95e-11 | 1 |
follicular cell of ovary | 2.50e-10 | 1 |
granulosa cell | 2.50e-10 | 1 |
fat cell | 5.58e-10 | 15 |
receptor cell | 6.29e-07 | 6 |
sensory epithelial cell | 6.29e-07 | 6 |
olfactory epithelial cell | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
right ovary | 2.63e-08 | 5 |
omentum | 5.75e-07 | 6 |
peritoneum | 5.75e-07 | 6 |
abdominal cavity | 5.75e-07 | 6 |
visceral peritoneum | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.19e-10 | 1 |
liver cancer | 2.08e-10 | 1 |