FFCP PHASE1:Hg19::chr9:101705760..101705771,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1306 | |EntrezGene=1306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2192 | |HGNC=2192 | ||
|TSSclassifier=strong | |||
|UniProt=P39059 | |UniProt=P39059 | ||
|association_with_transcript=-149bp_to_ENST00000375001,ENST00000471477_5end | |association_with_transcript=-149bp_to_ENST00000375001,ENST00000471477_5end | ||
|cluster_id=chr9:101705760..101705771,+ | |||
|coexpression_cluster_id=C1547 | |coexpression_cluster_id=C1547 | ||
|description=CAGE_peak_12_at_COL15A1_5end | |description=CAGE_peak_12_at_COL15A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000487;1.26e-10;2!CL:0000138;8.11e-08;6!CL:0002622;3.88e-07;3 | |ontology_enrichment_celltype_v019=CL:1000487;1.26e-10;2!CL:0000138;8.11e-08;6!CL:0002622;3.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000487,2.04e-10,2;CL:0000058,7.14e-08,6;CL:0000138,7.14e-08,6;CL:0002622,3.76e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.28e-30!115;UBERON:0003101!1.92e-08!22;UBERON:0000079!1.92e-08!22;UBERON:0004122!7.60e-08!15;UBERON:0001046!4.13e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!4.28e-30!115;UBERON:0003101!1.92e-08!22;UBERON:0000079!1.92e-08!22;UBERON:0004122!7.60e-08!15;UBERON:0001046!4.13e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.26e-10;2!UBERON:0003127;2.72e-10;2!UBERON:0003101;1.40e-09;22!UBERON:0000079;1.40e-09;22!UBERON:0001044;1.09e-07;6!UBERON:0003293;1.09e-07;6!UBERON:0003294;1.09e-07;6!UBERON:0010047;1.09e-07;6!UBERON:0003408;1.09e-07;6!UBERON:0000167;1.09e-07;6!UBERON:0003978;1.89e-07;3!UBERON:0000946;1.89e-07;3!UBERON:0002367;4.79e-07;11!UBERON:0010147;4.79e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001829;1.26e-10;2!UBERON:0003127;2.72e-10;2!UBERON:0003101;1.40e-09;22!UBERON:0000079;1.40e-09;22!UBERON:0001044;1.09e-07;6!UBERON:0003293;1.09e-07;6!UBERON:0003294;1.09e-07;6!UBERON:0010047;1.09e-07;6!UBERON:0003408;1.09e-07;6!UBERON:0000167;1.09e-07;6!UBERON:0003978;1.89e-07;3!UBERON:0000946;1.89e-07;3!UBERON:0002367;4.79e-07;11!UBERON:0010147;4.79e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.73e-11,2;UBERON:0003127,2.99e-10,2;UBERON:0003101,1.29e-09,22;UBERON:0000079,1.29e-09,22;UBERON:0001044,9.91e-08,6;UBERON:0003293,9.91e-08,6;UBERON:0003294,9.91e-08,6;UBERON:0010047,9.91e-08,6;UBERON:0000167,9.91e-08,6;UBERON:0004122,1.22e-07,15;UBERON:0003978,1.35e-07,3;UBERON:0009751,1.35e-07,3;UBERON:0000946,1.35e-07,3;UBERON:0002523,1.35e-07,3;UBERON:0005983,1.35e-07,3;UBERON:0002165,1.35e-07,3;UBERON:0002062,1.35e-07,3;UBERON:0007280,1.35e-07,3;UBERON:0000161,2.75e-07,36;UBERON:0002367,5.55e-07,11;UBERON:0010147,5.55e-07,11;UBERON:0009846,5.55e-07,11;UBERON:0003353,5.55e-07,11;UBERON:0004902,5.55e-07,11;UBERON:0003820,5.55e-07,11;UBERON:0009847,5.55e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.289693037921647,1.5905718941022,6.32625331393427,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.85422955527427,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,0.535286966391485,0.630809660135739,6.79420206957737,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.512556597022804,0,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,1.7222167224691,1.27463817604702,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,1.6068392984416,0.48335359146061,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18399858252777,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.687944129886466,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90995361781156,1.83328339209347,0.717873024576814,0.399358000997982,0.858452096273142,1.56220020209311,3.15762320687613,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.367182116944987,0,0,0,5.71756261098694,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,3.0082787282724,2.14441903734423,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,6.12046354122208,0,0,0.0679697329768317,0.0657727735628491,0,0,0.941917114206168,0.157115589916002,0,2.73947616152849,0,0,0.500335809236594,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,5.799072156691,2.4285549652957,0,0,0.356760272332706,0,0,0,0.540219106755613,0.874238242015829,0,0.735444965261716,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,2.75237570042724,0,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,1.43979526614655,1.87574891109325,0,0,0.852935927603924,1.42838658878244,0.258355639344024,0.248298857183432,0,0.636471582781649,1.41482032270754,0.870866991587845,6.16019941953506,0.80822463617505,1.5061663132462,1.33064142618405,0,0,0,0,2.34640942403454,0.855690109280065,0.813792356631477,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.289693037921647,1.5905718941022,6.32625331393427,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.85422955527427,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0,0,1.66376689224646,0.535286966391485,0.630809660135739,6.79420206957737,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.512556597022804,0,0.64341568457443,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,1.7222167224691,1.27463817604702,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,1.6068392984416,0.48335359146061,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18399858252777,1.1312434556297,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.552567831062295,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,0,0.30607276163049,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.687944129886466,0,0,0,0.969890164884194,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90995361781156,1.83328339209347,0.717873024576814,0.399358000997982,0.858452096273142,1.56220020209311,3.15762320687613,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.367182116944987,0,0,0,5.71756261098694,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,3.0082787282724,2.14441903734423,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.64477330057155,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,6.12046354122208,0,0,0.0679697329768317,0.0657727735628491,0,0,0.941917114206168,0.157115589916002,0,2.73947616152849,0,0,0.500335809236594,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,5.799072156691,2.4285549652957,0,0,0.356760272332706,0,0,0,0.540219106755613,0.874238242015829,0,0.735444965261716,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,2.75237570042724,0,0,0.0679914901909147,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,1.43979526614655,1.87574891109325,0,0,0.852935927603924,1.42838658878244,0.258355639344024,0.248298857183432,0,0.636471582781649,1.41482032270754,0.870866991587845,6.16019941953506,0.80822463617505,1.5061663132462,1.33064142618405,0,0,0,0,2.34640942403454,0.855690109280065,0.813792356631477,0.665756774185513,0.201273793591026,0 | ||
|short_description=p12@COL15A1 | |short_description=p12@COL15A1 | ||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p12@COL15A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_COL15A1_5end |
Coexpression cluster: | C1547_Olfactory_Chondrocyte_heart_diaphragm_tongue_mature_placenta |
Association with transcript: | -149bp_to_ENST00000375001, ENST00000471477_5end |
EntrezGene: | COL15A1 |
HGNC: | 2192 |
UniProt: | P39059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 2.04e-10 | 2 |
chondroblast | 7.14e-08 | 6 |
chondrocyte | 7.14e-08 | 6 |
prostate stromal cell | 3.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.73e-11 | 2 |
open tracheal system trachea | 2.99e-10 | 2 |
male organism | 1.29e-09 | 22 |
male reproductive system | 1.29e-09 | 22 |
saliva-secreting gland | 9.91e-08 | 6 |
gland of oral region | 9.91e-08 | 6 |
gland of foregut | 9.91e-08 | 6 |
oral gland | 9.91e-08 | 6 |
oral cavity | 9.91e-08 | 6 |
genitourinary system | 1.22e-07 | 15 |
valve | 1.35e-07 | 3 |
cardiac mesenchyme | 1.35e-07 | 3 |
cardial valve | 1.35e-07 | 3 |
tunica intima | 1.35e-07 | 3 |
heart layer | 1.35e-07 | 3 |
endocardium | 1.35e-07 | 3 |
endocardial cushion | 1.35e-07 | 3 |
presumptive endocardium | 1.35e-07 | 3 |
orifice | 2.75e-07 | 36 |
prostate gland | 5.55e-07 | 11 |
male accessory sex gland | 5.55e-07 | 11 |
embryonic cloacal epithelium | 5.55e-07 | 11 |
epithelium of hindgut | 5.55e-07 | 11 |
urogenital sinus epithelium | 5.55e-07 | 11 |
prostate bud | 5.55e-07 | 11 |
prostate field | 5.55e-07 | 11 |