FFCP PHASE1:Hg19::chr2:173340364..173340378,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:173340364..173340378,+ | |||
|description=CAGE_peak_at_chr2:173340364..173340378,+ | |description=CAGE_peak_at_chr2:173340364..173340378,+ | ||
|id=chr2:173340364..173340378,+ | |id=chr2:173340364..173340378,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.02e-13!254;CL:0002076!1.95e-08!43;CL:0000223!9.84e-08!59;CL:0002251!8.47e-07!21 | |ontology_enrichment_celltype=CL:0000066!3.02e-13!254;CL:0002076!1.95e-08!43;CL:0000223!9.84e-08!59;CL:0002251!8.47e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002166;7.57e-24;3!CL:0002159;1.28e-19;14!CL:0000622;8.71e-15;5!CL:0002076;9.19e-13;42!CL:0000154;2.06e-12;6!CL:0000240;2.40e-12;6!CL:0000311;2.40e-12;6!CL:0000079;2.40e-12;6!CL:0000237;2.40e-12;6!CL:0002231;2.44e-11;3!CL:0002623;2.44e-11;3!CL:0002251;1.59e-09;20!CL:0002077;2.23e-09;34!CL:0002336;2.50e-09;1!CL:0002261;2.50e-09;1!CL:0002170;2.50e-09;1!CL:0002379;2.50e-09;1!CL:0000150;1.94e-08;9!CL:0000362;1.94e-08;9!CL:0000312;3.85e-07;5 | |ontology_enrichment_celltype_v019=CL:0002166;7.57e-24;3!CL:0002159;1.28e-19;14!CL:0000622;8.71e-15;5!CL:0002076;9.19e-13;42!CL:0000154;2.06e-12;6!CL:0000240;2.40e-12;6!CL:0000311;2.40e-12;6!CL:0000079;2.40e-12;6!CL:0000237;2.40e-12;6!CL:0002231;2.44e-11;3!CL:0002623;2.44e-11;3!CL:0002251;1.59e-09;20!CL:0002077;2.23e-09;34!CL:0002336;2.50e-09;1!CL:0002261;2.50e-09;1!CL:0002170;2.50e-09;1!CL:0002379;2.50e-09;1!CL:0000150;1.94e-08;9!CL:0000362;1.94e-08;9!CL:0000312;3.85e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,4.58e-24,3;CL:0002159,7.99e-20,14;CL:0000622,1.05e-14,5;CL:0002076,1.52e-13,42;CL:0000240,1.63e-12,6;CL:0000311,1.63e-12,6;CL:0000079,1.63e-12,6;CL:0000237,1.63e-12,6;CL:0000036,1.63e-12,6;CL:0000357,1.63e-12,6;CL:0000114,1.63e-12,6;CL:0000154,2.41e-12,6;CL:0002231,2.64e-11,3;CL:0002623,3.09e-11,3;CL:0002077,1.33e-10,34;CL:0002251,1.51e-09,20;CL:0000223,1.95e-09,58;CL:0002336,2.04e-09,1;CL:0002261,2.04e-09,1;CL:0002170,2.04e-09,1;CL:0002379,2.22e-09,1;CL:0000066,1.26e-08,253;CL:0000362,1.59e-08,9;CL:0000150,2.15e-08,9;CL:0000312,3.06e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.40e-12;6!CL:0000114;2.40e-12;6 | |ontology_enrichment_development_v019=CL:0000357;2.40e-12;6!CL:0000114;2.40e-12;6 | ||
|ontology_enrichment_disease=DOID:305!8.73e-08!106;DOID:0050687!1.79e-07!143 | |ontology_enrichment_disease=DOID:305!8.73e-08!106;DOID:0050687!1.79e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3620;2.50e-09;1!DOID:3565;2.50e-09;1!DOID:3112;6.21e-09;1 | |ontology_enrichment_disease_v019=DOID:3620;2.50e-09;1!DOID:3565;2.50e-09;1!DOID:3112;6.21e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,2.22e-09,1;DOID:3565,2.22e-09,1;DOID:3112,4.54e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;4.80e-18;4!UBERON:0008895;4.80e-18;4!UBERON:0011159;1.49e-14;5!UBERON:0011137;6.99e-07;11!UBERON:0010323;6.99e-07;11!UBERON:0000165;9.59e-07;28 | |ontology_enrichment_uberon_v019=UBERON:0001708;4.80e-18;4!UBERON:0008895;4.80e-18;4!UBERON:0011159;1.49e-14;5!UBERON:0011137;6.99e-07;11!UBERON:0010323;6.99e-07;11!UBERON:0000165;9.59e-07;28 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.29e-18,4;UBERON:0008895,3.29e-18,4;UBERON:0011159,1.10e-14,5;UBERON:0010188,2.50e-12,6;UBERON:0002539,2.50e-12,6;UBERON:0008816,2.50e-12,6;UBERON:0003102,6.07e-11,99;UBERON:0000033,7.42e-10,56;UBERON:0000153,9.02e-09,62;UBERON:0007811,9.02e-09,62;UBERON:0000161,3.19e-07,36;UBERON:0008814,4.13e-07,18;UBERON:0010323,6.13e-07,11 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0.473447805734733,0,0.222820913770347,0,0,0.541607727530031,0.25618263945135,0,0,0,0,0.593146252648242,0.267540828089713,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,1.90922284413584,0.573609190778008,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,2.19500570817251,0,1.91005047582099,2.59247646443883,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,4.36753533317035,1.41775097242386,0.53735113621709,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,2.00506470303285,1.38121483403844,0,0.546273504020151,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,4.55042172225565,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,1.32227932288782,1.92190067365106,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.19372242368845,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.568967241427498,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.538545866458633,0.325942115766024,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0.599428828746391,0.288180834308212,0,0.171594997861965,0.288109595976299,0.248505071130865,0.471388069233591,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.393915911536118,0.164831716762333,0.26961417541674,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,2.58792401667989,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0.530067437837643,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.588886311006154,0,1.28400018965175,0.115525666150338,0,0,0,0,0.20170506870352,0,0.261906694481422,1.47394725759087,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0.535701835878287,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.24329698497822,2.0486217251274,0,0,0,0.0852134047591577,0.423387050190929,0.4582137370881,0,0,0,0.098150233615243,0.243835849964539,0.647428837187895,0,1.1598144313382,0.485710993059139,0.467878926924211,0.994753875806841,0,0,0.109940516745429,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,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|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.501559486172034,0,0.473447805734733,0,0.222820913770347,0,0,0.541607727530031,0.25618263945135,0,0,0,0,0.593146252648242,0.267540828089713,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0.386521706326594,1.90922284413584,0.573609190778008,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,2.19500570817251,0,1.91005047582099,2.59247646443883,0,0,1.44331342025273,0,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,4.36753533317035,1.41775097242386,0.53735113621709,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,2.00506470303285,1.38121483403844,0,0.546273504020151,0,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,4.55042172225565,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.0890320356467374,1.32227932288782,1.92190067365106,0.382838137483752,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.19372242368845,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.568967241427498,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.538545866458633,0.325942115766024,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0.599428828746391,0.288180834308212,0,0.171594997861965,0.288109595976299,0.248505071130865,0.471388069233591,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0.393915911536118,0.164831716762333,0.26961417541674,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0.992332043623902,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,2.58792401667989,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0,0,0.219284049578707,0.530067437837643,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.588886311006154,0,1.28400018965175,0.115525666150338,0,0,0,0,0.20170506870352,0,0.261906694481422,1.47394725759087,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0.535701835878287,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0.118193840883968,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,1.24329698497822,2.0486217251274,0,0,0,0.0852134047591577,0.423387050190929,0.4582137370881,0,0,0,0.098150233615243,0.243835849964539,0.647428837187895,0,1.1598144313382,0.485710993059139,0.467878926924211,0.994753875806841,0,0,0.109940516745429,0,0.308696632431779,0.218559560503957,0.470317296361523,0,0,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| ||
|short_description=p@chr2:173340364..173340378,+ | |short_description=p@chr2:173340364..173340378,+ | ||
}} | }} |
Latest revision as of 02:29, 29 July 2015
Short description: | p@chr2:173340364..173340378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:173340364..173340378, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 4.58e-24 | 3 |
general ecto-epithelial cell | 7.99e-20 | 14 |
acinar cell | 1.05e-14 | 5 |
endo-epithelial cell | 1.52e-13 | 42 |
stratified squamous epithelial cell | 1.63e-12 | 6 |
keratin accumulating cell | 1.63e-12 | 6 |
stratified epithelial cell | 1.63e-12 | 6 |
keratinizing barrier epithelial cell | 1.63e-12 | 6 |
epithelial fate stem cell | 1.63e-12 | 6 |
stratified epithelial stem cell | 1.63e-12 | 6 |
surface ectodermal cell | 1.63e-12 | 6 |
protein secreting cell | 2.41e-12 | 6 |
epithelial cell of prostate | 2.64e-11 | 3 |
acinar cell of salivary gland | 3.09e-11 | 3 |
ecto-epithelial cell | 1.33e-10 | 34 |
epithelial cell of alimentary canal | 1.51e-09 | 20 |
endodermal cell | 1.95e-09 | 58 |
buccal mucosa cell | 2.04e-09 | 1 |
endothelial cell of viscerocranial mucosa | 2.04e-09 | 1 |
keratinized cell of the oral mucosa | 2.04e-09 | 1 |
meningothelial cell | 2.22e-09 | 1 |
epithelial cell | 1.26e-08 | 253 |
epidermal cell | 1.59e-08 | 9 |
glandular epithelial cell | 2.15e-08 | 9 |
keratinocyte | 3.06e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.29e-18 | 4 |
splanchnocranium | 3.29e-18 | 4 |
primary subdivision of cranial skeletal system | 1.10e-14 | 5 |
protuberance | 2.50e-12 | 6 |
pharyngeal arch | 2.50e-12 | 6 |
embryonic head | 2.50e-12 | 6 |
surface structure | 6.07e-11 | 99 |
head | 7.42e-10 | 56 |
anterior region of body | 9.02e-09 | 62 |
craniocervical region | 9.02e-09 | 62 |
orifice | 3.19e-07 | 36 |
pharyngeal arch system | 4.13e-07 | 18 |
cranial skeletal system | 6.13e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.22e-09 | 1 |
meningioma | 2.22e-09 | 1 |
papillary adenocarcinoma | 4.54e-09 | 1 |