FFCP PHASE1:Hg19::chr20:15967531..15967544,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:15967531..15967544,+
|short_description=p@chr20:15967531..15967544,+
|description=CAGE_peak_at_chr20:15967531..15967544,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:15967531..15967544,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr20:15967531..15967544,+ | |||
|id=chr20:15967531..15967544,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.56e-13!24;CL:0000826!5.56e-13!24;CL:0000159!9.54e-10!2;CL:0000838!7.23e-08!52;CL:0000542!1.12e-07!53;CL:0000051!1.12e-07!53;CL:0000236!1.71e-07!14;CL:0002149!6.48e-07!6;CL:0002255!6.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000313;4.72e-17;1!CL:0000159;3.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.72e-17,1;CL:0000159,3.43e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!2.00e-15!25;DOID:4468!4.18e-10!2;DOID:3001!6.48e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.26e-32;2!DOID:299;7.71e-22;25!DOID:2152;4.72e-17;1!DOID:120;1.93e-09;27!DOID:3493;5.08e-09;2!DOID:193;8.31e-09;29!DOID:0060058;4.52e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.57e-32,2;DOID:299,7.30e-22,25;DOID:2152,4.72e-17,1;DOID:120,1.81e-09,27;DOID:3493,5.08e-09,2;DOID:193,7.81e-09,29;DOID:0060058,4.39e-07,10;DOID:162,8.46e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.19e-10!6;UBERON:0000007!2.33e-09!2;UBERON:0002780!3.47e-09!41;UBERON:0001890!3.47e-09!41;UBERON:0006240!3.47e-09!41;UBERON:0003080!6.34e-09!42;UBERON:0001950!2.80e-08!20;UBERON:0001869!4.89e-08!32;UBERON:0007023!5.55e-08!115;UBERON:0001872!1.07e-07!5;UBERON:0001893!1.71e-07!34;UBERON:0002619!1.75e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;4.72e-17;1!UBERON:0000997;2.08e-16;1!UBERON:0005056;2.08e-16;1!UBERON:0004176;2.08e-16;1!UBERON:0004909;3.43e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,4.72e-17,1;UBERON:0000997,1.93e-16,1;UBERON:0005056,1.93e-16,1;UBERON:0004909,3.43e-09,2 | |||
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| ||
|short_description=p@chr20:15967531..15967544,+ | |||
}} | }} |
Latest revision as of 12:02, 28 July 2015
Short description: | p@chr20:15967531..15967544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:15967531..15967544, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.72e-17 | 1 |
seromucus secreting cell | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 4.72e-17 | 1 |
mammalian vulva | 1.93e-16 | 1 |
external female genitalia | 1.93e-16 | 1 |
epithelium of gonad | 3.43e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.57e-32 | 2 |
adenocarcinoma | 7.30e-22 | 25 |
ovary epithelial cancer | 4.72e-17 | 1 |
female reproductive organ cancer | 1.81e-09 | 27 |
signet ring cell adenocarcinoma | 5.08e-09 | 2 |
reproductive organ cancer | 7.81e-09 | 29 |
lymphoma | 4.39e-07 | 10 |
cancer | 8.46e-07 | 235 |