FFCP PHASE1:Hg19::chr12:52862701..52862727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52862701..52862727,- | |||
|coexpression_cluster_id=C197 | |coexpression_cluster_id=C197 | ||
|description=CAGE_peak_at_chr12:52862701..52862727,- | |description=CAGE_peak_at_chr12:52862701..52862727,- | ||
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|ontology_enrichment_celltype=CL:0002621!3.35e-18!3;CL:0002159!7.91e-16!13;CL:0000575!6.32e-13!2;CL:0002251!1.42e-12!21;CL:0002076!1.86e-11!43;CL:0000622!3.67e-11!5;CL:0002077!3.46e-10!33;CL:0000154!2.23e-09!6;CL:0002623!1.29e-08!3;CL:0002166!1.68e-08!3;CL:0000223!6.99e-08!59 | |ontology_enrichment_celltype=CL:0002621!3.35e-18!3;CL:0002159!7.91e-16!13;CL:0000575!6.32e-13!2;CL:0002251!1.42e-12!21;CL:0002076!1.86e-11!43;CL:0000622!3.67e-11!5;CL:0002077!3.46e-10!33;CL:0000154!2.23e-09!6;CL:0002623!1.29e-08!3;CL:0002166!1.68e-08!3;CL:0000223!6.99e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002159;9.63e-19;14!CL:0000317;1.91e-15;2!CL:1000448;1.91e-15;2!CL:0002308;1.91e-15;2!CL:0002140;1.91e-15;2!CL:0000575;2.55e-15;2!CL:0000362;1.69e-13;9!CL:0002077;8.42e-08;34!CL:0000622;5.87e-07;5!CL:0000312;6.58e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;9.63e-19;14!CL:0000317;1.91e-15;2!CL:1000448;1.91e-15;2!CL:0002308;1.91e-15;2!CL:0002140;1.91e-15;2!CL:0000575;2.55e-15;2!CL:0000362;1.69e-13;9!CL:0002077;8.42e-08;34!CL:0000622;5.87e-07;5!CL:0000312;6.58e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,9.34e-19,14;CL:0000317,1.78e-15,2;CL:1000448,1.78e-15,2;CL:0002308,1.78e-15,2;CL:0002140,1.78e-15,2;CL:0000575,2.37e-15,2;CL:0000362,1.69e-13,9;CL:0002077,3.76e-08,34;CL:0000622,5.70e-07,5;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.33e-29;1!UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2 | |ontology_enrichment_development_v019=UBERON:0009143;1.33e-29;1!UBERON:0008814;1.15e-15;2!UBERON:0010056;1.15e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!3.35e-18!3;UBERON:0000166!1.41e-16!21;UBERON:0000165!3.27e-15!28;UBERON:0000930!3.27e-15!28;UBERON:0000161!1.03e-14!35;UBERON:0001444!1.57e-12!48;UBERON:0003102!1.36e-10!95;UBERON:0001723!4.67e-09!3;UBERON:0001033!4.67e-09!3;UBERON:0010056!4.67e-09!3;UBERON:0000478!5.44e-08!24;UBERON:0000078!6.79e-08!18;UBERON:0001004!1.45e-07!72;UBERON:0001828!4.02e-07!8;UBERON:0006834!5.45e-07!1;UBERON:0001043!6.32e-07!4;UBERON:0009143!6.32e-07!4;UBERON:0000964!7.10e-07!4;UBERON:0004348!7.10e-07!4;UBERON:0005427!7.10e-07!4;UBERON:0002372!8.18e-07!1;UBERON:0001961!8.18e-07!1;UBERON:0001744!8.18e-07!1;UBERON:0001735!8.18e-07!1 | |ontology_enrichment_uberon=UBERON:0001949!3.35e-18!3;UBERON:0000166!1.41e-16!21;UBERON:0000165!3.27e-15!28;UBERON:0000930!3.27e-15!28;UBERON:0000161!1.03e-14!35;UBERON:0001444!1.57e-12!48;UBERON:0003102!1.36e-10!95;UBERON:0001723!4.67e-09!3;UBERON:0001033!4.67e-09!3;UBERON:0010056!4.67e-09!3;UBERON:0000478!5.44e-08!24;UBERON:0000078!6.79e-08!18;UBERON:0001004!1.45e-07!72;UBERON:0001828!4.02e-07!8;UBERON:0006834!5.45e-07!1;UBERON:0001043!6.32e-07!4;UBERON:0009143!6.32e-07!4;UBERON:0000964!7.10e-07!4;UBERON:0004348!7.10e-07!4;UBERON:0005427!7.10e-07!4;UBERON:0002372!8.18e-07!1;UBERON:0001961!8.18e-07!1;UBERON:0001744!8.18e-07!1;UBERON:0001735!8.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;9.99e-30;1!UBERON:0002419;1.91e-15;2!UBERON:0007771;1.91e-15;2!UBERON:0003297;1.91e-15;2!UBERON:0001821;1.91e-15;2!UBERON:0003487;1.91e-15;2!UBERON:0001820;1.91e-15;2!UBERON:0001723;6.73e-11;3!UBERON:0001033;6.73e-11;3!UBERON:0001043;8.17e-11;3!UBERON:0001003;1.71e-08;15!UBERON:0007376;1.71e-08;15!UBERON:0000964;2.52e-08;4!UBERON:0010409;2.52e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0005795;9.99e-30;1!UBERON:0002419;1.91e-15;2!UBERON:0007771;1.91e-15;2!UBERON:0003297;1.91e-15;2!UBERON:0001821;1.91e-15;2!UBERON:0003487;1.91e-15;2!UBERON:0001820;1.91e-15;2!UBERON:0001723;6.73e-11;3!UBERON:0001033;6.73e-11;3!UBERON:0001043;8.17e-11;3!UBERON:0001003;1.71e-08;15!UBERON:0007376;1.71e-08;15!UBERON:0000964;2.52e-08;4!UBERON:0010409;2.52e-08;4!UBERON:0002050;5.08e-07;5!UBERON:0005423;5.08e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.78e-15,2;UBERON:0007771,1.78e-15,2;UBERON:0003297,1.78e-15,2;UBERON:0001821,1.78e-15,2;UBERON:0003487,1.78e-15,2;UBERON:0001820,1.78e-15,2;UBERON:0005089,1.78e-15,2;UBERON:0005088,1.78e-15,2;UBERON:0001723,6.73e-11,3;UBERON:0001033,6.73e-11,3;UBERON:0010056,6.73e-11,3;UBERON:0001043,8.17e-11,3;UBERON:0009143,8.17e-11,3;UBERON:0001003,1.71e-08,15;UBERON:0007376,1.71e-08,15;UBERON:0007383,1.71e-08,15;UBERON:0000964,2.43e-08,4;UBERON:0010409,2.43e-08,4;UBERON:0004348,2.43e-08,4;UBERON:0005427,2.43e-08,4 | |||
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|short_description=p@chr12:52862701..52862727,- | |short_description=p@chr12:52862701..52862727,- | ||
}} | }} |
Latest revision as of 09:32, 24 July 2015
Short description: | p@chr12:52862701..52862727, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52862701..52862727, - |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 9.34e-19 | 14 |
sebum secreting cell | 1.78e-15 | 2 |
epithelial cell of sweat gland | 1.78e-15 | 2 |
epithelial cell of skin gland | 1.78e-15 | 2 |
acinar cell of sebaceous gland | 1.78e-15 | 2 |
corneal epithelial cell | 2.37e-15 | 2 |
epidermal cell | 1.69e-13 | 9 |
ecto-epithelial cell | 3.76e-08 | 34 |
acinar cell | 5.70e-07 | 5 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.78e-15 | 2 |
epidermis gland | 1.78e-15 | 2 |
gland of integumental system | 1.78e-15 | 2 |
sebaceous gland | 1.78e-15 | 2 |
skin sebaceous gland | 1.78e-15 | 2 |
sweat gland | 1.78e-15 | 2 |
sweat gland placode | 1.78e-15 | 2 |
sebaceous gland placode | 1.78e-15 | 2 |
tongue | 6.73e-11 | 3 |
gustatory system | 6.73e-11 | 3 |
future tongue | 6.73e-11 | 3 |
esophagus | 8.17e-11 | 3 |
esophageal region | 8.17e-11 | 3 |
skin epidermis | 1.71e-08 | 15 |
outer epithelium | 1.71e-08 | 15 |
enveloping layer of ectoderm | 1.71e-08 | 15 |
cornea | 2.43e-08 | 4 |
eye surface | 2.43e-08 | 4 |
optic eminence | 2.43e-08 | 4 |
corneal primordium | 2.43e-08 | 4 |