FFCP PHASE1:Hg19::chr17:77813226..77813249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8535 | |EntrezGene=8535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1554 | |HGNC=1554 | ||
|TSSclassifier=strong | |||
|UniProt=O00257 | |UniProt=O00257 | ||
|association_with_transcript=0bp_to_ENST00000269397_5end | |association_with_transcript=0bp_to_ENST00000269397_5end | ||
|cluster_id=chr17:77813226..77813249,- | |||
|description=CAGE_peak_1_at_CBX4_5end | |description=CAGE_peak_1_at_CBX4_5end | ||
|id=chr17:77813226..77813249,- | |id=chr17:77813226..77813249,- | ||
|ontology_enrichment_celltype=CL:0000037!9.97e-14!172;CL:0000566!9.97e-14!172;CL:0000988!2.28e-13!182;CL:0000738!5.95e-13!140;CL:0002032!1.68e-11!165;CL:0000837!1.68e-11!165;CL:0000838!1.03e-09!52;CL:0000542!1.33e-09!53;CL:0000051!1.33e-09!53;CL:0002087!1.83e-09!119;CL:0002031!1.94e-07!124 | |ontology_enrichment_celltype=CL:0000037!9.97e-14!172;CL:0000566!9.97e-14!172;CL:0000988!2.28e-13!182;CL:0000738!5.95e-13!140;CL:0002032!1.68e-11!165;CL:0000837!1.68e-11!165;CL:0000838!1.03e-09!52;CL:0000542!1.33e-09!53;CL:0000051!1.33e-09!53;CL:0002087!1.83e-09!119;CL:0002031!1.94e-07!124 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.84e-13,177;CL:0000037,3.74e-13,168;CL:0000738,2.19e-12,136;CL:0002032,5.80e-11,161;CL:0000837,5.80e-11,161;CL:0000838,1.03e-09,52;CL:0000542,1.33e-09,53;CL:0000051,1.33e-09,53;CL:0002087,6.03e-09,115;CL:0002031,5.73e-07,120 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!7.29e-19!235;DOID:14566!4.16e-17!239;DOID:0050687!4.88e-16!143;DOID:305!1.44e-12!106;DOID:0050686!7.31e-08!137 | |ontology_enrichment_disease=DOID:162!7.29e-19!235;DOID:14566!4.16e-17!239;DOID:0050687!4.88e-16!143;DOID:305!1.44e-12!106;DOID:0050686!7.31e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,7.29e-19,235;DOID:14566,4.16e-17,239;DOID:0050687,4.88e-16,143;DOID:305,1.44e-12,106;DOID:0050686,7.31e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001041!4.47e-07!98 | |ontology_enrichment_uberon=UBERON:0001041!4.47e-07!98 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CBX4 | |short_description=p1@CBX4 | ||
}} | }} |
Latest revision as of 02:34, 18 September 2015
Short description: | p1@CBX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBX4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000269397_5end |
EntrezGene: | CBX4 |
HGNC: | 1554 |
UniProt: | O00257 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.84e-13 | 177 |
hematopoietic stem cell | 3.74e-13 | 168 |
leukocyte | 2.19e-12 | 136 |
hematopoietic oligopotent progenitor cell | 5.80e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.80e-11 | 161 |
lymphoid lineage restricted progenitor cell | 1.03e-09 | 52 |
lymphocyte | 1.33e-09 | 53 |
common lymphoid progenitor | 1.33e-09 | 53 |
nongranular leukocyte | 6.03e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 5.73e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.29e-19 | 235 |
disease of cellular proliferation | 4.16e-17 | 239 |
cell type cancer | 4.88e-16 | 143 |
carcinoma | 1.44e-12 | 106 |
organ system cancer | 7.31e-08 | 137 |