FFCP PHASE1:Hg19::chr15:90030191..90030200,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90030191..90030200,- | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr15:90030191..90030200,- | |description=CAGE_peak_at_chr15:90030191..90030200,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000244!1.41e-14!4;CL:0000731!1.41e-14!4 | |ontology_enrichment_celltype=CL:0000244!1.41e-14!4;CL:0000731!1.41e-14!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.14e-26;4!CL:0000731;7.14e-26;4 | |ontology_enrichment_celltype_v019=CL:0000244;7.14e-26;4!CL:0000731;7.14e-26;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.14e-26,4;CL:0000731,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.37e-99;1 | |ontology_enrichment_development_v019=UBERON:0009143;9.37e-99;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.04e-18!3;UBERON:0001033!1.04e-18!3;UBERON:0010056!1.04e-18!3;UBERON:0002771!2.53e-18!3;UBERON:0002372!1.23e-14!1;UBERON:0001961!1.23e-14!1;UBERON:0001744!1.23e-14!1;UBERON:0001735!1.23e-14!1;UBERON:0001042!1.38e-12!10;UBERON:0009145!1.38e-12!10;UBERON:0000365!7.47e-12!5;UBERON:0006562!1.70e-11!11;UBERON:0005910!4.97e-10!6;UBERON:0000200!1.21e-09!6;UBERON:0007023!2.34e-08!115;UBERON:0003127!5.37e-08!2;UBERON:0000341!6.58e-08!2;UBERON:0001871!1.88e-07!7;UBERON:0000078!3.11e-07!18;UBERON:0000072!3.27e-07!46;UBERON:0001557!7.05e-07!19 | |ontology_enrichment_uberon=UBERON:0001723!1.04e-18!3;UBERON:0001033!1.04e-18!3;UBERON:0010056!1.04e-18!3;UBERON:0002771!2.53e-18!3;UBERON:0002372!1.23e-14!1;UBERON:0001961!1.23e-14!1;UBERON:0001744!1.23e-14!1;UBERON:0001735!1.23e-14!1;UBERON:0001042!1.38e-12!10;UBERON:0009145!1.38e-12!10;UBERON:0000365!7.47e-12!5;UBERON:0006562!1.70e-11!11;UBERON:0005910!4.97e-10!6;UBERON:0000200!1.21e-09!6;UBERON:0007023!2.34e-08!115;UBERON:0003127!5.37e-08!2;UBERON:0000341!6.58e-08!2;UBERON:0001871!1.88e-07!7;UBERON:0000078!3.11e-07!18;UBERON:0000072!3.27e-07!46;UBERON:0001557!7.05e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;4.27e-34;3!UBERON:0000365;5.15e-21;5!UBERON:0005910;9.07e-18;6!UBERON:0000486;1.33e-09;12!UBERON:0001041;1.86e-08;14 | |ontology_enrichment_uberon_v019=UBERON:0001043;4.27e-34;3!UBERON:0000365;5.15e-21;5!UBERON:0005910;9.07e-18;6!UBERON:0000486;1.33e-09;12!UBERON:0001041;1.86e-08;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,4.27e-34,3;UBERON:0009143,4.27e-34,3;UBERON:0000365,5.15e-21,5;UBERON:0005910,9.07e-18,6 | |||
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|short_description=p@chr15:90030191..90030200,- | |short_description=p@chr15:90030191..90030200,- | ||
}} | }} |
Latest revision as of 05:19, 25 July 2015
Short description: | p@chr15:90030191..90030200, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90030191..90030200, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.14e-26 | 4 |
urothelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
esophagus | 4.27e-34 | 3 |
esophageal region | 4.27e-34 | 3 |
urothelium | 5.15e-21 | 5 |
transitional epithelium | 9.07e-18 | 6 |