FFCP PHASE1:Hg19::chr8:143751707..143751730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8000 | |EntrezGene=8000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9500 | |HGNC=9500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505305,NR_033343_5end | |association_with_transcript=0bp_to_ENST00000505305,NR_033343_5end | ||
|cluster_id=chr8:143751707..143751730,+ | |||
|coexpression_cluster_id=C193 | |coexpression_cluster_id=C193 | ||
|description=CAGE_peak_2_at_PSCA_5end | |description=CAGE_peak_2_at_PSCA_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.36e-12!180;CL:0000057!1.77e-11!75;CL:0000548!2.07e-08!679;CL:0000004!2.07e-08!679;CL:0000255!2.07e-08!679;CL:0002620!4.84e-08!23;CL:0000012!6.22e-08!682 | |ontology_enrichment_celltype=CL:0000055!4.36e-12!180;CL:0000057!1.77e-11!75;CL:0000548!2.07e-08!679;CL:0000004!2.07e-08!679;CL:0000255!2.07e-08!679;CL:0002620!4.84e-08!23;CL:0000012!6.22e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.93e-10;23!CL:0002559;3.61e-07;5 | |ontology_enrichment_celltype_v019=CL:0002620;1.93e-10;23!CL:0002559;3.61e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.26e-14,76;CL:0002620,1.44e-10,23;CL:0002559,2.84e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.17e-10!95;UBERON:0002097!1.42e-08!40;UBERON:0002199!5.59e-08!45;UBERON:0002416!5.59e-08!45;UBERON:0002067!8.23e-07!9;UBERON:0004016!8.23e-07!9;UBERON:0010083!8.23e-07!9 | |ontology_enrichment_uberon=UBERON:0003102!1.17e-10!95;UBERON:0002097!1.42e-08!40;UBERON:0002199!5.59e-08!45;UBERON:0002416!5.59e-08!45;UBERON:0002067!8.23e-07!9;UBERON:0004016!8.23e-07!9;UBERON:0010083!8.23e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;5.86e-09;9!UBERON:0002097;1.09e-08;41!UBERON:0011135;8.18e-08;5!UBERON:0002216;8.18e-08;5!UBERON:0011134;8.18e-08;5!UBERON:0002209;8.18e-08;5!UBERON:0002213;8.18e-08;5!UBERON:0007844;8.18e-08;5!UBERON:0011138;8.18e-08;5!UBERON:0001130;8.18e-08;5!UBERON:0001066;8.18e-08;5!UBERON:0001468;8.18e-08;5!UBERON:0002073;3.61e-07;5!UBERON:0000075;4.93e-07;16!UBERON:0003102;5.55e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002067;5.86e-09;9!UBERON:0002097;1.09e-08;41!UBERON:0011135;8.18e-08;5!UBERON:0002216;8.18e-08;5!UBERON:0011134;8.18e-08;5!UBERON:0002209;8.18e-08;5!UBERON:0002213;8.18e-08;5!UBERON:0007844;8.18e-08;5!UBERON:0011138;8.18e-08;5!UBERON:0001130;8.18e-08;5!UBERON:0001066;8.18e-08;5!UBERON:0001468;8.18e-08;5!UBERON:0002073;3.61e-07;5!UBERON:0000075;4.93e-07;16!UBERON:0003102;5.55e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.81e-12,41;UBERON:0002199,9.10e-11,46;UBERON:0002416,9.10e-11,46;UBERON:0003102,5.50e-10,99;UBERON:0002067,4.96e-09,9;UBERON:0004016,4.96e-09,9;UBERON:0010083,4.96e-09,9;UBERON:0011135,7.47e-08,5;UBERON:0002216,7.47e-08,5;UBERON:0011134,7.47e-08,5;UBERON:0002209,7.47e-08,5;UBERON:0002213,7.47e-08,5;UBERON:0005856,7.47e-08,5;UBERON:0005866,7.47e-08,5;UBERON:0005863,7.47e-08,5;UBERON:0007844,7.47e-08,5;UBERON:0011138,7.47e-08,5;UBERON:0001130,7.47e-08,5;UBERON:0001066,7.47e-08,5;UBERON:0001468,7.47e-08,5;UBERON:0002073,2.84e-07,5;UBERON:0005086,2.84e-07,5;UBERON:0000075,4.18e-07,16 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,3.79031924056099,0,0.982935746006035,0,0.873765488520689,0.263766978228454,10.7676727075241,11.2675107747491,0,0,0,0,1.10808952269109,2.44800829493104,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0,0,0.447830948479849,0.32389366601898,0,0,1.13362783106643,0.242584061187816,0,2.05583944010913,0.929119112685311,0,1.0246428261164,1.18241114944293,0,2.5819387343353,2.70852973188684,0,2.45615535052061,1.34834090667051,0,1.60464513538047,1.91801137739712,0,0.598390972864896,0.852449501065388,0,1.13477044938228,0,0,3.12889751052121,0.217188844705117,0,1.84138817993782,2.21523671208619,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,2.43806866313962,0,0.383587685530591,2.89151321907653,6.01605492763067,2.60723734129483,1.5905718941022,3.89307896242109,0.472674085820339,0.221729397462564,0.351339142772504,0.130979075497713,1.45718115317017,0,0,0.174129737299267,0.132957960518865,0,0,0,0.79504962946682,3.4409383804245,1.38856200643038,2.26123176769604,0.419499436209906,1.92582629358047,0.208994966536811,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0,2.57364156242108,0.81014194788176,0,0,0.900891843866578,0,1.89853131913626,1.09921046358244,0,0,0.436094052142534,0,0.506522046658319,1.05927344650575,0,0,0.560677600142307,0,0,1.55605517699883,0,0.980771418680752,0,0,3.74914290934075,16.2323239951767,7.41613368007784,8.81747215255626,0.939475989150119,5.17993421978021,2.38766371393822,21.2320338105089,6.5102188175237,18.3919890492862,1.18800285728205,1.97813543422845,3.64064544775211,2.87447256726495,6.39677233025452,5.00474079487857,12.190821081304,3.95079858792754,0.919463387397059,1.50238058906597,0,0,0,1.48352330811693,4.80145753735044,1.8549455262919,0.257640540045629,0,2.36286865137773,0.876933046450788,5.3011092591264,2.48534726334208,10.1837015795851,1.77504796258307,3.02256294682921,4.23901480776219,1.35282597214308,0,0.860413786167011,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,4.5026865673502,6.90674606762403,27.3977077538868,67.856671276941,0.591534000199219,0.337169380156203,0.723033089650446,0.110293972732394,0.871517776369625,0,1.21348177344148,1.17732879075208,0.769494313892781,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.201057944823262,0.370353780634118,6.19035780089617,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0.570762456703795,2.37061319387782,2.57545848628462,0.492434012174795,0.234004265139238,0.297262324577456,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0.952468414382536,0,7.03304683260282,0,0.514137463516618,3.00343057843917,0.285826432630578,3.58819469905154,1.30788020649984,2.2001485746285,0.129271715757778,175.251658467422,2.535908257668,0,0,0,5.67396528093113,0,0.57191197463259,0,0,2.93162565864362,0.710783897485092,0,0.602878754119172,0,0.199945982364114,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,3.92612773501248,26.5090376161629,7.05289061619313,0,0,4.25796520591624,2.22568688486155,4.21324539618807,0,6.2083842775503,0,2.39679919104214,3.5622281931914,5.48243240895674,3.77457766191941,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0.308419387605311,0.177561725313127,1.8067974323038,0.519254429183621,2.09178681227927,0.120859449591622,0.200506470303285,1.01289087829486,0,0.728364672026868,0.393373244878272,0.902399225814824,0.0770153371044148,2.35304930753057,0,0,0,0,0.863663664408557,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0.0915694648183434,0,0,0.650060246036521,0,0,6.77813915304435,8.289198435211,3.03240459465967,0,0,0.170453254832202,0,0,0,0,0,2.32422774648643,2.20368642781448,3.485186350803,1.23213432070436,1.06461206063404,0.869932992075073,0.37064843820784,0.715624433709956,2.232950216158,3.16379424718726,0.38126038784765,7.67693373934002,2.99557291623744,2.54562598340749,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,2.92580243453754,0,0,0.818999468447914,0.424216295861138,1.13008116620243,1.10273068709225,0,0.438450885253763,10.4179596168004,13.7737897929793,0,0,0,0,0.687743287091848,0,1.77380532035299,0,3.29294892959902,7.20999030154859,1.74967360122491,0,0,1.08890984861323,0.564862804660675,0.43050537267123,0,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0.540031437238115,0,0,0,1.47024129588619,0,0,0.142283686696828,0,0.39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|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,3.79031924056099,0,0.982935746006035,0,0.873765488520689,0.263766978228454,10.7676727075241,11.2675107747491,0,0,0,0,1.10808952269109,2.44800829493104,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0,0,0.447830948479849,0.32389366601898,0,0,1.13362783106643,0.242584061187816,0,2.05583944010913,0.929119112685311,0,1.0246428261164,1.18241114944293,0,2.5819387343353,2.70852973188684,0,2.45615535052061,1.34834090667051,0,1.60464513538047,1.91801137739712,0,0.598390972864896,0.852449501065388,0,1.13477044938228,0,0,3.12889751052121,0.217188844705117,0,1.84138817993782,2.21523671208619,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,2.43806866313962,0,0.383587685530591,2.89151321907653,6.01605492763067,2.60723734129483,1.5905718941022,3.89307896242109,0.472674085820339,0.221729397462564,0.351339142772504,0.130979075497713,1.45718115317017,0,0,0.174129737299267,0.132957960518865,0,0,0,0.79504962946682,3.4409383804245,1.38856200643038,2.26123176769604,0.419499436209906,1.92582629358047,0.208994966536811,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0,2.57364156242108,0.81014194788176,0,0,0.900891843866578,0,1.89853131913626,1.09921046358244,0,0,0.436094052142534,0,0.506522046658319,1.05927344650575,0,0,0.560677600142307,0,0,1.55605517699883,0,0.980771418680752,0,0,3.74914290934075,16.2323239951767,7.41613368007784,8.81747215255626,0.939475989150119,5.17993421978021,2.38766371393822,21.2320338105089,6.5102188175237,18.3919890492862,1.18800285728205,1.97813543422845,3.64064544775211,2.87447256726495,6.39677233025452,5.00474079487857,12.190821081304,3.95079858792754,0.919463387397059,1.50238058906597,0,0,0,1.48352330811693,4.80145753735044,1.8549455262919,0.257640540045629,0,2.36286865137773,0.876933046450788,5.3011092591264,2.48534726334208,10.1837015795851,1.77504796258307,3.02256294682921,4.23901480776219,1.35282597214308,0,0.860413786167011,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,1.56449532329816,4.5026865673502,6.90674606762403,27.3977077538868,67.856671276941,0.591534000199219,0.337169380156203,0.723033089650446,0.110293972732394,0.871517776369625,0,1.21348177344148,1.17732879075208,0.769494313892781,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.201057944823262,0.370353780634118,6.19035780089617,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0.570762456703795,2.37061319387782,2.57545848628462,0.492434012174795,0.234004265139238,0.297262324577456,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0.952468414382536,0,7.03304683260282,0,0.514137463516618,3.00343057843917,0.285826432630578,3.58819469905154,1.30788020649984,2.2001485746285,0.129271715757778,175.251658467422,2.535908257668,0,0,0,5.67396528093113,0,0.57191197463259,0,0,2.93162565864362,0.710783897485092,0,0.602878754119172,0,0.199945982364114,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0,0,0,0,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,3.92612773501248,26.5090376161629,7.05289061619313,0,0,4.25796520591624,2.22568688486155,4.21324539618807,0,6.2083842775503,0,2.39679919104214,3.5622281931914,5.48243240895674,3.77457766191941,0,0,0,0.303127571446259,1.66435439510497,1.81434175997808,0,0.153461973288062,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0.308419387605311,0.177561725313127,1.8067974323038,0.519254429183621,2.09178681227927,0.120859449591622,0.200506470303285,1.01289087829486,0,0.728364672026868,0.393373244878272,0.902399225814824,0.0770153371044148,2.35304930753057,0,0,0,0,0.863663664408557,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0.0915694648183434,0,0,0.650060246036521,0,0,6.77813915304435,8.289198435211,3.03240459465967,0,0,0.170453254832202,0,0,0,0,0,2.32422774648643,2.20368642781448,3.485186350803,1.23213432070436,1.06461206063404,0.869932992075073,0.37064843820784,0.715624433709956,2.232950216158,3.16379424718726,0.38126038784765,7.67693373934002,2.99557291623744,2.54562598340749,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,2.92580243453754,0,0,0.818999468447914,0.424216295861138,1.13008116620243,1.10273068709225,0,0.438450885253763,10.4179596168004,13.7737897929793,0,0,0,0,0.687743287091848,0,1.77380532035299,0,3.29294892959902,7.20999030154859,1.74967360122491,0,0,1.08890984861323,0.564862804660675,0.43050537267123,0,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0.540031437238115,0,0,0,1.47024129588619,0,0,0.142283686696828,0,0.39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| ||
|short_description=p2@PSCA | |short_description=p2@PSCA | ||
}} | }} |
Latest revision as of 21:09, 16 September 2015
Short description: | p2@PSCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSCA_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 0bp_to_ENST00000505305, NR_033343_5end |
EntrezGene: | PSCA |
HGNC: | 9500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.26e-14 | 76 |
skin fibroblast | 1.44e-10 | 23 |
hair follicle cell | 2.84e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.81e-12 | 41 |
integument | 9.10e-11 | 46 |
integumental system | 9.10e-11 | 46 |
surface structure | 5.50e-10 | 99 |
dermis | 4.96e-09 | 9 |
dermatome | 4.96e-09 | 9 |
future dermis | 4.96e-09 | 9 |
intervertebral cartilage | 7.47e-08 | 5 |
symphysis | 7.47e-08 | 5 |
nonsynovial joint | 7.47e-08 | 5 |
fibrous joint | 7.47e-08 | 5 |
cartilaginous joint | 7.47e-08 | 5 |
developing mesenchymal condensation | 7.47e-08 | 5 |
pre-cartilage condensation | 7.47e-08 | 5 |
cartilaginous condensation | 7.47e-08 | 5 |
cartilage element | 7.47e-08 | 5 |
post-cranial axial skeletal system | 7.47e-08 | 5 |
vertebral column | 7.47e-08 | 5 |
intervertebral disk | 7.47e-08 | 5 |
intervertebral joint | 7.47e-08 | 5 |
hair follicle | 2.84e-07 | 5 |
hair follicle placode | 2.84e-07 | 5 |
subdivision of skeletal system | 4.18e-07 | 16 |