FFCP PHASE1:Hg19::chr20:43214306..43214347,-: Difference between revisions
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|id=chr20:43214306..43214347,-
|short_description=p@chr20:43214306..43214347,-
|description=CAGE_peak_at_chr20:43214306..43214347,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:43214306..43214347,- | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_at_chr20:43214306..43214347,- | |||
|id=chr20:43214306..43214347,- | |||
|ontology_enrichment_celltype=CL:0000945!8.78e-84!24;CL:0000826!8.78e-84!24;CL:0000236!8.08e-53!14;CL:0000542!2.76e-39!53;CL:0000051!2.76e-39!53;CL:0000838!3.18e-36!52;CL:0002087!6.73e-20!119;CL:0000738!3.85e-16!140;CL:0000817!4.79e-16!3;CL:0002031!6.70e-14!124;CL:0000037!3.54e-12!172;CL:0000566!3.54e-12!172;CL:0000785!2.54e-11!2;CL:0000955!2.54e-11!2;CL:0000818!2.54e-11!2;CL:0000954!2.54e-11!2;CL:0000816!2.54e-11!2;CL:0000988!3.17e-11!182;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0000842!1.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.56e-75;24!CL:0000236;5.94e-74;13!CL:0000542;6.34e-25;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.26e-75,24;CL:0000826,1.26e-75,24;CL:0000236,9.97e-69,14;CL:0000838,1.63e-34,52;CL:0000542,7.57e-34,53;CL:0000051,7.57e-34,53;CL:0002087,5.77e-15,115;CL:0002031,2.64e-14,120;CL:0000738,1.63e-12,136;CL:0002032,2.05e-10,161;CL:0000837,2.05e-10,161;CL:0000037,6.14e-10,168;CL:0000988,2.23e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000051;6.34e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.08e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.77e-14;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.69e-14,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!5.04e-08!3;UBERON:0004854!5.04e-08!3;UBERON:0009034!5.04e-08!3;UBERON:0002095!5.04e-08!3;UBERON:0004782!5.04e-08!3;UBERON:0003281!5.04e-08!3;UBERON:0009664!5.04e-08!3;UBERON:0002296!5.04e-08!3;UBERON:0005602!5.04e-08!3;UBERON:0001179!5.04e-08!3;UBERON:0006293!5.04e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.08e-16;1!UBERON:0001961;2.08e-16;1!UBERON:0001744;2.08e-16;1!UBERON:0001042;2.08e-16;1!UBERON:0001735;2.08e-16;1!UBERON:0006562;7.21e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.07e-16,1;UBERON:0001961,3.07e-16,1;UBERON:0001744,3.07e-16,1;UBERON:0001735,3.07e-16,1 | |||
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|short_description=p@chr20:43214306..43214347,- | |||
}} | }} |
Latest revision as of 14:13, 28 July 2015
Short description: | p@chr20:43214306..43214347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43214306..43214347, - |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.26e-75 | 24 |
pro-B cell | 1.26e-75 | 24 |
B cell | 9.97e-69 | 14 |
lymphoid lineage restricted progenitor cell | 1.63e-34 | 52 |
lymphocyte | 7.57e-34 | 53 |
common lymphoid progenitor | 7.57e-34 | 53 |
nongranular leukocyte | 5.77e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.64e-14 | 120 |
leukocyte | 1.63e-12 | 136 |
hematopoietic oligopotent progenitor cell | 2.05e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-10 | 161 |
hematopoietic stem cell | 6.14e-10 | 168 |
hematopoietic cell | 2.23e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.07e-16 | 1 |
mucosa-associated lymphoid tissue | 3.07e-16 | 1 |
lymphoid tissue | 3.07e-16 | 1 |
tonsillar ring | 3.07e-16 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.69e-14 | 10 |