FFCP PHASE1:Hg19::chr14:24606523..24606543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5720 | |EntrezGene=5720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9568 | |HGNC=9568 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-63bp_to_ENST00000559741_5end | |association_with_transcript=-63bp_to_ENST00000559741_5end | ||
|cluster_id=chr14:24606523..24606543,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_4_at_PSME1_5end | |description=CAGE_peak_4_at_PSME1_5end | ||
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|ontology_enrichment_celltype=CL:0002087!7.99e-10!119;CL:0000738!2.04e-09!140;CL:0000988!1.40e-08!182;CL:0002031!2.61e-08!124;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63;CL:0000037!6.05e-08!172;CL:0000566!6.05e-08!172;CL:0000766!7.13e-08!76;CL:0002009!8.43e-08!65;CL:0002032!1.77e-07!165;CL:0000837!1.77e-07!165;CL:0000839!2.67e-07!70;CL:0000557!6.25e-07!71 | |ontology_enrichment_celltype=CL:0002087!7.99e-10!119;CL:0000738!2.04e-09!140;CL:0000988!1.40e-08!182;CL:0002031!2.61e-08!124;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63;CL:0000037!6.05e-08!172;CL:0000566!6.05e-08!172;CL:0000766!7.13e-08!76;CL:0002009!8.43e-08!65;CL:0002032!1.77e-07!165;CL:0000837!1.77e-07!165;CL:0000839!2.67e-07!70;CL:0000557!6.25e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000064;7.34e-08;3!CL:0000067;7.34e-08;3!CL:0005012;7.34e-08;3!CL:0002304;7.34e-08;3 | |ontology_enrichment_celltype_v019=CL:0000064;7.34e-08;3!CL:0000067;7.34e-08;3!CL:0005012;7.34e-08;3!CL:0002304;7.34e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.00e-09,115;CL:0000738,1.97e-09,136;CL:0000064,2.37e-08,3;CL:0000067,2.37e-08,3;CL:0005012,2.37e-08,3;CL:0002304,2.37e-08,3;CL:0002031,2.16e-07,120;CL:0000037,8.40e-07,168 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002203;1.06e-09;6!UBERON:0001768;1.06e-09;6!UBERON:0002200;1.06e-09;6!UBERON:0006876;1.70e-09;11!UBERON:0001778;7.34e-08;3!UBERON:0001775;7.34e-08;3!UBERON:0001801;3.16e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0002203;1.06e-09;6!UBERON:0001768;1.06e-09;6!UBERON:0002200;1.06e-09;6!UBERON:0006876;1.70e-09;11!UBERON:0001778;7.34e-08;3!UBERON:0001775;7.34e-08;3!UBERON:0001801;3.16e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002203,4.91e-10,6;UBERON:0001768,4.91e-10,6;UBERON:0002200,4.91e-10,6;UBERON:0006876,1.34e-09,11;UBERON:0001778,2.37e-08,3;UBERON:0001775,2.37e-08,3;UBERON:0001801,3.03e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0.436882744260345,1.05506791291381,0,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,1.02000345622126,0.313454721478088,0,2.18999080116615,0.502170558379211,0.152826811495903,0.328402357799783,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0.30120591877825,0.369754010166788,0,0,0,1.10799081706375,2.00544447470142,1.51907609501096,0.671746422719773,0.32389366601898,0.515151135268373,1.01778767145695,0.755751887377619,0.242584061187816,1.16214518452842,1.23350366406548,0.309706370895104,0.575384784644301,0.768482119587302,0,1.72372840368309,0,0,0.752969358170419,1.63743690034707,0,1.22433556948361,0.641858054152187,0,0.329851300186716,0.997318288108159,0.426224750532694,1.45104619314292,1.13477044938228,0,2.00998932205395,1.0429658368404,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0.450530678524519,0,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,3.41527781465669,5.28513470433845,4.20500550937752,0,0.560508562981536,0,0.196709770113833,3.53709686474248,2.46721798799411,0.167186495390678,0,0.473447805734733,0,0.557052284425868,0.883817722424512,0.221533894583621,0,0.384273959177026,0.260118695119756,0.493313713811028,0,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,1.81446068902259,3.4767225451856,1.30341963494519,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,1.60709189178915,2.21729397462564,1.75669571386252,0.0654895377488563,1.09288586487763,1.11235332835329,0.97364218096405,0.870648686496336,2.26028532882071,1.43094374583205,1.14398982156026,0,0,0,0,0.56530794192401,0,0,0,2.84258435086262,1.06729878806013,0,0,0,0,0,0.81014194788176,0.625098097988558,0,0.337834441449967,0,0,0,0,0,2.18047026071267,0,0,0,0,0.709336764396714,0,0,0.49333509683432,0,1.0776853765575,0.653847612453835,0.151357427644931,1.15235184896,0.468642863667593,0.312160076830321,0,0,0.469737994575059,0.161872944368132,0.421352420106746,0.816616685019573,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0.718618141816238,0,0.500474079487857,0,0,0,0.600952235626387,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.10366105501537,0,0,0,0,0,0.928735856063958,0,0.236613600079688,0.337169380156203,0.241011029883482,0.330881918197182,0,0,0.134831308160164,0.196221465125346,0.38474715694639,1.4763109092493,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0.301586917234893,0,0.325808305310325,0,0,0,0,0.288732895522148,0.925971025153221,0.190254152234598,0,0,1.72351904261178,0.936017060556951,0.743155811443641,0.93733833986777,0,0.141775097242386,0,0,0,0.492663237895943,0.176096868026452,0,0,0.12624243342638,0,0,1.17217447210047,1.71072446022705,0.102827492703324,0.300343057843917,0.571652865261156,0.112131084345361,0,0,0,0,0,0,0,0,2.83698264046557,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0.723906533337896,1.64381058040307,0.179060963239896,0.224170287987055,0.394061520403854,2.58753089831421,1.92514554419623,0,0,0.773288812777695,0,1.27587750330633,0,23.932916736322,1.24324654030811,0,0.500170521059677,0,0.831883446123229,0.713715955188647,0.157702415033935,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0.620304078368662,2.15714200818617,1.49418580924822,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0,0.229628896329213,0,0.393373244878272,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.105551628892876,3.4120015221269,2.04112446331819,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0.831076008928724,0.895499018888713,0,0.261435451024901,0.256450125116389,1.96808787419823,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0.193341436584244,0.924291702687866,0.15350367472613,0.964856007391714,0.859361958946189,1.30515024522806,0.511359764496605,0,0,0,0.127612712494584,0.4046311234222,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.949138274156178,1.14378116354295,0,0.855877976067841,0,0,1.07923474549989,1.64722217841633,0.589062011728432,0,0,0.842516912477962,1.46290121726877,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0.633322905892992,1.31717957183961,1.13841952129715,1.39973888097993,0,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0.490080431962063,0,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0.191505370132367,0.42334716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| ||
|short_description=p4@PSME1 | |short_description=p4@PSME1 | ||
}} | }} |
Latest revision as of 13:24, 19 September 2015
Short description: | p4@PSME1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PSME1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -63bp_to_ENST00000559741_5end |
EntrezGene: | PSME1 |
HGNC: | 9568 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.00e-09 | 115 |
leukocyte | 1.97e-09 | 136 |
ciliated cell | 2.37e-08 | 3 |
ciliated epithelial cell | 2.37e-08 | 3 |
multi-ciliated epithelial cell | 2.37e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.37e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 2.16e-07 | 120 |
hematopoietic stem cell | 8.40e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
vasculature of eye | 4.91e-10 | 6 |
uvea | 4.91e-10 | 6 |
vasculature of head | 4.91e-10 | 6 |
vasculature of organ | 1.34e-09 | 11 |
ciliary epithelium | 2.37e-08 | 3 |
ciliary body | 2.37e-08 | 3 |
anterior segment of eyeball | 3.03e-07 | 14 |