FFCP PHASE1:Hg19::chr21:46964277..46964287,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6573 | |EntrezGene=6573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10937 | |HGNC=10937 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8K6 | |UniProt=C9J8K6 | ||
|association_with_transcript=26bp_to_ENST00000443742_5end | |association_with_transcript=26bp_to_ENST00000443742_5end | ||
|cluster_id=chr21:46964277..46964287,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_18_at_SLC19A1_5end | |description=CAGE_peak_18_at_SLC19A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!2.04e-10!7;CL:0000586!2.04e-10!7 | |ontology_enrichment_celltype=CL:0000039!2.04e-10!7;CL:0000586!2.04e-10!7 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.37e-99;1!UBERON:0004872;1.65e-15;7!UBERON:0005795;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0003124;9.37e-99;1!UBERON:0004872;1.65e-15;7!UBERON:0005795;2.73e-11;10 | ||
|ontology_enrichment_disease=DOID:0050619!1.05e-08!1;DOID:1357!1.05e-08!1 | |ontology_enrichment_disease=DOID:0050619!1.05e-08!1;DOID:1357!1.05e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!8.90e-11!3;UBERON:0005290!8.90e-11!3;UBERON:0010096!8.90e-11!3;UBERON:0007023!5.82e-10!115;UBERON:0001000!7.18e-09!1;UBERON:0005352!7.18e-09!1;UBERON:0002336!8.36e-09!1;UBERON:0001018!8.36e-09!1;UBERON:0002473!8.36e-09!1;UBERON:0005340!8.36e-09!1;UBERON:0002316!8.36e-09!1;UBERON:0003544!8.36e-09!1;UBERON:0001020!8.36e-09!1;UBERON:0005970!8.36e-09!1;UBERON:0002437!8.36e-09!1;UBERON:0001874!9.74e-09!1;UBERON:0001764!1.05e-08!1;UBERON:0001825!1.05e-08!1;UBERON:0002363!2.06e-08!1;UBERON:0007647!2.06e-08!1;UBERON:0010115!2.06e-08!1 | |ontology_enrichment_uberon=UBERON:0001896!8.90e-11!3;UBERON:0005290!8.90e-11!3;UBERON:0010096!8.90e-11!3;UBERON:0007023!5.82e-10!115;UBERON:0001000!7.18e-09!1;UBERON:0005352!7.18e-09!1;UBERON:0002336!8.36e-09!1;UBERON:0001018!8.36e-09!1;UBERON:0002473!8.36e-09!1;UBERON:0005340!8.36e-09!1;UBERON:0002316!8.36e-09!1;UBERON:0003544!8.36e-09!1;UBERON:0001020!8.36e-09!1;UBERON:0005970!8.36e-09!1;UBERON:0002437!8.36e-09!1;UBERON:0001874!9.74e-09!1;UBERON:0001764!1.05e-08!1;UBERON:0001825!1.05e-08!1;UBERON:0002363!2.06e-08!1;UBERON:0007647!2.06e-08!1;UBERON:0010115!2.06e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.56e-26;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;5.56e-26;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.56e-26,4;UBERON:0004340,5.56e-26,4;UBERON:0003124,1.65e-15,7;UBERON:0005631,1.86e-08,14;UBERON:0000158,1.86e-08,14 | |||
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|short_description=p18@SLC19A1 | |short_description=p18@SLC19A1 | ||
}} | }} |
Latest revision as of 21:21, 18 September 2015
Short description: | p18@SLC19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SLC19A1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 26bp_to_ENST00000443742_5end |
EntrezGene: | SLC19A1 |
HGNC: | 10937 |
UniProt: | C9J8K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 5.56e-26 | 4 |
allantois | 5.56e-26 | 4 |
chorion | 1.65e-15 | 7 |
extraembryonic membrane | 1.86e-08 | 14 |
membranous layer | 1.86e-08 | 14 |